Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL13A1

Gene Name Gene ID Reads Annotation
COL13A1 ENSGALG00000004286 957 collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]











Genes with expression patterns similar to COL13A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL13A1 ENSGALG00000004286 957 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]
2. E2F4 ENSGALG00000001722 2916 1.478 - - - - - - 0.729 - 0.749 - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
3. TXNRD1 ENSGALG00000035345 4784 1.469 - - - - - - - - 0.749 0.720 Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
4. F5 ENSGALG00000029298 1850 0.935 - - - - - - - - 0.935 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
5. SH3TC1 ENSGALG00000015568 484 0.932 - - - - - - - - 0.932 - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
6. AFG3L2 ENSGALG00000013853 1138 0.92 - - - - - - - - 0.920 - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
7. PCNX PCNX 110 0.918 - - - - - - - - 0.918 -
8. CAMK4 ENSGALG00000000244 151 0.912 - - - - - - - - 0.912 - calcium/calmodulin dependent protein kinase IV [Source:NCBI gene;Acc:723973]
9. SLC25A48 ENSGALG00000006341 2606 0.91 - - - - - - - - 0.910 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
10. LTV1 ENSGALG00000013765 2917 0.907 - - - - - - - - 0.907 - LTV1 ribosome biogenesis factor
11. NTL ENSGALG00000005156 278 0.9 - - - - - - - - 0.900 - neurotrypsin-like, transcript variant X7
12. ANKRD50 ENSGALG00000011831 2870 0.898 - - - - - - - - 0.898 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
13. SLC45A3 ENSGALG00000000703 85 0.89 - - - - - - - - 0.890 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
14. TMEM74 ENSGALG00000041553 398 0.887 - - - - - - - - 0.887 - transmembrane protein 74 [Source:HGNC Symbol;Acc:HGNC:26409]
15. SH3D19 ENSGALG00000010081 52 0.886 - - - - - - - - 0.886 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
16. RUFY1 ENSGALG00000029706 4473 0.884 - - - - - - - - 0.884 - RUN and FYVE domain containing 1 [Source:NCBI gene;Acc:426519]
17. SAMD13 ENSGALG00000008835 1597 0.883 - - - - - - - - 0.883 - sterile alpha motif domain containing 13 [Source:NCBI gene;Acc:424541]
18. CHRNA7 ENSGALG00000004096 107 0.882 - - - - - - - - 0.882 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
19. TTPAL ENSGALG00000004244 2734 0.878 - - - - - - - - 0.878 - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
20. DDRGK1 ENSGALG00000016003 9098 0.878 - - - - - - - - 0.878 - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
21. MAP3K5 ENSGALG00000013892 565 0.877 - - - - - - - - 0.877 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
22. ENSGALG00000006730 ENSGALG00000006730 3695 0.872 - - - - - - - - 0.872 -
23. PCLO 249 0.872 - - - - - - - - 0.872 - piccolo presynaptic cytomatrix protein
24. FASTKD3 ENSGALG00000033521 1186 0.87 - - - - - - - - 0.870 - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
25. RAD17 ENSGALG00000015571 1374 0.87 - - - - - - - - 0.870 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
26. SNCAIP ENSGALG00000005330 2425 0.869 - - - - - - - - 0.869 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
27. GTPBP10 ENSGALG00000009035 1397 0.868 - - - - - - - - 0.868 - GTP binding protein 10 [Source:HGNC Symbol;Acc:HGNC:25106]
28. CCDC66 ENSGALG00000005450 1262 0.867 - - - - - - - - 0.867 - coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
29. FAM18B1 ENSGALG00000001335 5177 0.864 - - - - - - - - 0.864 - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
30. BACH1 ENSGALG00000015828 114 0.858 - - - - - - - - 0.858 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
31. FAM120B ENSGALG00000011180 101 0.856 - - - - - - - - 0.856 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
32. GALM ENSGALG00000013828 1546 0.855 - - - - - - - - 0.855 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
33. ODZ2 ODZ2 1380 0.855 - - - - - - - - 0.855 -
34. RIN3 ENSGALG00000010806 729 0.854 - - - - - - - - 0.854 - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
35. GDPD2 ENSGALG00000005842 86 0.854 - - - - - - - - 0.854 - glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974]
36. KIAA1217 ENSGALG00000007766 144 0.853 - - - - - - - - 0.853 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
37. CREB5 ENSGALG00000038265 92 0.853 - - - - - - - - 0.853 - cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
38. ALMS1 ENSGALG00000044620 570 0.853 - - - - - - - - 0.853 - ALMS1, centrosome and basal body associated protein, transcript variant X1
39. HTT ENSGALG00000015635 226 0.852 - - - - - - - - 0.852 - huntingtin [Source:HGNC Symbol;Acc:HGNC:4851]
40. ANKRD49 ENSGALG00000017210 3247 0.851 - - - - - - - - 0.851 - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
41. PXN ENSGALG00000007247 615 0.85 - - - - - - - - 0.850 - paxillin [Source:NCBI gene;Acc:395832]
42. CEP97 ENSGALG00000015342 1117 0.849 - - - - - - - - 0.849 - centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]
43. IQGAP1 ENSGALG00000030162 1047 0.849 - - - - - - - - 0.849 - IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
44. TBX18 ENSGALG00000032789 1768 0.849 - - - - - - - - 0.849 - T-box 18 [Source:NCBI gene;Acc:395104]
45. C1orf131 C1orf131 141 0.847 - - - - - - - - 0.847 -
46. MSANTD4 ENSGALG00000017177 3306 0.846 - - - - - - - - 0.846 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
47. LHCGR ENSGALG00000009095 174 0.845 - - - - - - - - 0.845 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
48. LRRC59 ENSGALG00000007673 2081 0.844 - - - - - - - - 0.844 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
49. SPATA5L1 ENSGALG00000005682 240 0.843 - - - - - - - - 0.843 - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
50. KLHL15 ENSGALG00000016345 1638 0.841 - - - - - - - - 0.841 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
51. RRM2B ENSGALG00000040921 600 0.841 - - - - - - - - 0.841 - ribonucleotide reductase regulatory TP53 inducible subunit M2B [Source:HGNC Symbol;Acc:HGNC:17296]
52. ENSGALG00000026919 ENSGALG00000026919 301 0.841 - - - - - - - - 0.841 -
53. RUNX1T1 ENSGALG00000033091 17529 0.839 - - - - - - - - 0.839 - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
54. XPOT ENSGALG00000009835 2953 0.839 - - - - - - - - 0.839 - exportin for tRNA [Source:NCBI gene;Acc:417824]
55. FAM171B ENSGALG00000002646 837 0.839 - - - - - - - - 0.839 - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
56. RUFY2 1442 0.838 - - - - - - - - 0.838 - RUN and FYVE domain containing 2, transcript variant X1
57. CARS2 ENSGALG00000016847 3814 0.837 - - - - - - - - 0.837 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
58. NOL7 ENSGALG00000012695 774 0.837 - - - - - - - - 0.837 - nucleolar protein 7 [Source:HGNC Symbol;Acc:HGNC:21040]
59. KRT14 ENSGALG00000003690 682 0.836 - - - - - - - - 0.836 - keratin 14 [Source:NCBI gene;Acc:408039]
60. ABCC8 ENSGALG00000006172 41 0.836 - - - - - - - - 0.836 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
61. TP53RK ENSGALG00000004469 1165 0.834 - - - - - - - - 0.834 - TP53 regulating kinase [Source:HGNC Symbol;Acc:HGNC:16197]
62. FDFT1 ENSGALG00000016665 3053 0.833 - - - - - - - - 0.833 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
63. RABEP1 ENSGALG00000001737 2650 0.832 - - - - - - - - 0.832 - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
64. ABCB6 ENSGALG00000029672 1465 0.831 - - - - - - - - 0.831 - ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
65. PCYT2 ENSGALG00000007251 2277 0.831 - - - - - - - - 0.831 - phosphate cytidylyltransferase 2, ethanolamine [Source:NCBI gene;Acc:422093]
66. PLCXD3 ENSGALG00000014845 247 0.83 - - - - - - - - 0.830 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
67. AACS ENSGALG00000002899 960 0.83 - - - - - - - - 0.830 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
68. DTX3L ENSGALG00000012075 399 0.828 - - - - - - - - 0.828 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
69. PXMP4 ENSGALG00000003042 1035 0.828 - - - - - - - - 0.828 - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
70. MDN1 ENSGALG00000015733 2352 0.828 - - - - - - - - 0.828 - midasin AAA ATPase 1, transcript variant X1
71. SMAP2 ENSGALG00000029244 498 0.827 - - - - - - - - 0.827 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
72. C1H13ORF27 C1H13ORF27 635 0.825 - - - - - - - - 0.825 -
73. HEPH ENSGALG00000037410 640 0.825 - - - - - - - - 0.825 - hephaestin [Source:HGNC Symbol;Acc:HGNC:4866]
74. PRDM15 ENSGALG00000019178 2729 0.823 - - - - - - - - 0.823 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
75. RUVBL1 ENSGALG00000005931 9379 0.823 - - - - - - - - 0.823 - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
76. TPM4 ENSGALG00000002563 15621 0.822 - - - - - - - - 0.822 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
77. PLEKHH3 ENSGALG00000037269 875 0.82 - - - - - - - - 0.820 - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
78. FYN ENSGALG00000015022 1208 0.82 - - - - - - - - 0.820 - FYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:396294]
79. C7 ENSGALG00000014835 322 0.819 - - - - - - - - 0.819 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
80. FLRT3 ENSGALG00000008716 593 0.818 - - - - - - - - 0.818 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
81. CEP112 ENSGALG00000034989 123 0.817 - - - - - - - - 0.817 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
82. MTSS1 ENSGALG00000041969 1312 0.817 - - - - - - - - 0.817 - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
83. EPFIP1L ENSGALG00000007683 18050 0.816 - - - - - - - - 0.816 - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
84. FANCB ENSGALG00000016569 1193 0.815 - - - - - - - - 0.815 - FA complementation group B [Source:NCBI gene;Acc:418628]
85. ENSGALG00000014190 ENSGALG00000014190 5735 0.813 - - - - - - - - 0.813 -
86. TBCE ENSGALG00000013950 3076 0.811 - - - - - - - - 0.811 - tubulin folding cofactor E
87. TAF1D ENSGALG00000017220 3012 0.809 - - - - - - - - 0.809 - TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
88. TOM1L2 ENSGALG00000004902 89 0.809 - - - - - - - - 0.809 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
89. POGZ ENSGALG00000036365 4056 0.808 - - - - - - - - 0.808 - pogo transposable element with ZNF domain, transcript variant X2
90. MIB1 ENSGALG00000014974 3583 0.807 - - - - - - - - 0.807 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
91. ERBB2 ENSGALG00000031529 313 0.807 - - - - - - - - 0.807 - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
92. NBN ENSGALG00000037686 648 0.806 - - - - - - - - 0.806 - nibrin [Source:NCBI gene;Acc:374246]
93. KPNA6 ENSGALG00000003383 6937 0.806 - - - - - - - - 0.806 - karyopherin subunit alpha 6 [Source:NCBI gene;Acc:419656]
94. RPAIN ENSGALG00000001666 2676 0.806 - - - - - - - - 0.806 - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
95. CDA ENSGALG00000007382 1544 0.806 - - - - - - - - 0.806 - cytidine deaminase [Source:NCBI gene;Acc:771849]
96. VWF ENSGALG00000017272 1012 0.805 - - - - - - - - 0.805 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
97. NRXN1 ENSGALG00000009107 277 0.805 - - - - - - - - 0.805 - neurexin 1 [Source:NCBI gene;Acc:395398]
98. PCDH11X ENSGALG00000006851 314 0.804 - - - - - - - - 0.804 - protocadherin 11 X-linked, transcript variant X1
99. PDZRN4 ENSGALG00000009530 832 0.804 - - - - - - - - 0.804 - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
100. PDXDC1 ENSGALG00000034829 406 0.8 - - - - - - - - 0.800 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]

There are 195 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA