Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL13A1

Gene Name Gene ID Reads Annotation
COL13A1 1565 collagen, type XIII, alpha 1, transcript variant X1










Genes with expression patterns similar to COL13A1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. COL13A1 1565 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XIII, alpha 1, transcript variant X1
2. pes ENSDARG00000018902 3286 2.757 - 0.845 - - - - 0.984 0.928 - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
3. frem1a ENSDARG00000069473 1847 2.64 - - 0.799 - - - 0.931 0.910 - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
4. snrnp70 ENSDARG00000077126 5921 2.52 0.799 0.755 - - - - 0.966 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
5. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 2.496 - 0.798 - 0.707 - - 0.991 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
6. sp9 ENSDARG00000099374 2266 2.439 - - - 0.786 0.722 - 0.931 - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
7. nmt1a ENSDARG00000052966 5918 2.414 - 0.728 - - - - 0.914 0.772 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
8. and2 ENSDARG00000079302 20939 2.371 - - 0.733 0.767 0.871 - - - - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
9. zgc:101000 zgc:101000 9041 2.292 - - 0.767 0.744 - - - 0.781 -
10. CASKIN2_1 CASKIN2_1 2299 2.269 0.814 0.717 - 0.738 - - - - -
11. ntd5 ENSDARG00000040944 4988 2.247 - - - 0.722 0.733 - - 0.792 - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
12. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 2.229 - - - - 0.751 0.735 0.743 - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
13. kal1b kal1b 495 2.186 - 0.703 - 0.743 - - - - 0.740
14. agk ENSDARG00000009837, ENSDARG00000113514 811 1.961 - - - - - - 0.992 0.969 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
15. yy1b ENSDARG00000027978 2669 1.947 - - - - - - 0.989 0.958 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
16. RBBP8NL RBBP8NL 813 1.936 - - - - - - 0.993 0.943 -
17. uba5 ENSDARG00000063588 1260 1.926 - - - - - - 0.993 0.933 - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
18. scaf11 ENSDARG00000045885 3531 1.902 - - - - - - 0.945 0.957 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
19. dyrk1b ENSDARG00000070187 2777 1.896 - - - - - - 0.947 0.949 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
20. gigfy2 3194 1.881 - - - - - - 0.927 0.954 - GRB10 interacting GYF protein 2, transcript variant X1
21. abl1 ENSDARG00000035187 3553 1.878 - - - - - - 0.966 0.912 - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
22. zgc:92380 ENSDARG00000041339 1867 1.852 - - - - - - 0.948 0.904 - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
23. bin2b ENSDARG00000010255 2649 1.843 - - - - - 0.847 0.996 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
24. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.833 - - - - - - 0.982 0.851 - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
25. lzic ENSDARG00000055899 638 1.831 0.843 - - - - - 0.988 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
26. socs5a ENSDARG00000100717 6927 1.831 - 0.871 - - - - 0.960 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
27. kdm4b ENSDARG00000099675 2037 1.819 0.852 - - - - - 0.967 - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
28. ERRFI1 ERRFI1 664 1.817 - 0.822 - - - - 0.995 - -
29. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.816 - - - 0.857 - - - 0.959 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
30. trappc13 ENSDARG00000033768 1311 1.813 - 0.827 - - - - 0.986 - - trafficking protein particle complex 13 [Source:ZFIN;Acc:ZDB-GENE-030131-9775]
31. cul1b ENSDARG00000007691 719 1.812 - 0.816 - - - - 0.996 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
32. gpr146 ENSDARG00000059610 810 1.79 - 0.831 - - - - - 0.959 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
33. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.784 - 0.793 - - - - 0.991 - -
34. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.78 - 0.787 - - - - 0.993 - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
35. si:dkey-193p11.2 ENSDARG00000096712 3500 1.758 - - - - 0.859 - 0.899 - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
36. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 1.754 - - - - - 0.759 0.995 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
37. cdkn2aipnl ENSDARG00000053395 5107 1.753 - 0.821 - - - - 0.932 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
38. mrpl27 ENSDARG00000032985 2158 1.752 - 0.811 - - - - 0.941 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
39. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 1.752 - - - - - 0.780 0.972 - - dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
40. ncapg2 ENSDARG00000060023 993 1.741 - 0.758 - - - - 0.983 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
41. eif2ak3 ENSDARG00000062139 3276 1.739 0.783 - - - - - 0.956 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
42. clic1 ENSDARG00000103340 2235 1.731 0.824 - - - - - - 0.907 - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
43. fzr1 fzr1 2984 1.727 - 0.759 - - - - 0.968 - -
44. snx27a ENSDARG00000033804 2249 1.726 0.788 - - - - - - 0.938 - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
45. eftud2 ENSDARG00000012261 3081 1.724 - 0.754 - - - - 0.970 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
46. BX649554.3_1 BX649554.3_1 1071 1.721 - - - 0.790 - - - 0.931 -
47. cndp2 ENSDARG00000003931 1177 1.72 0.735 - - - - - 0.985 - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
48. pld1a ENSDARG00000056228 765 1.719 - 0.731 - - - - 0.988 - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
49. wu:fc34e06 1793 1.712 0.724 - - - - - 0.988 - - wu:fc34e06, transcript variant X10
50. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.709 - 0.760 - - - - - 0.949 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
51. rpl7a ENSDARG00000019230 1204 1.708 - 0.737 - - - - 0.971 - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
52. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.702 0.777 - - - - - - 0.925 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
53. WDR77 2463 1.701 - 0.737 - - - - - 0.964 - WD repeat domain 77
54. auts2 auts2 1538 1.7 - 0.726 - - - - 0.974 - -
55. osgn1 ENSDARG00000052279 5607 1.696 0.810 - - - - - - 0.886 - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
56. Mar-07 Mar-07 2926 1.692 - 0.712 - - - - 0.980 - -
57. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.686 0.775 - - - - - 0.911 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
58. etfa ENSDARG00000101631 2946 1.682 0.768 - - - - - 0.914 - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
59. LRP10 ENSDARG00000054539 1895 1.682 0.724 - - - - - - 0.958 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
60. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.68 - - - 0.743 - - 0.937 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
61. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 1.68 - - - - - - - 0.967 0.713 non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
62. wscd2 ENSDARG00000061819 304 1.68 - - 0.710 - - - - 0.970 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
63. chchd1 ENSDARG00000029100 2121 1.68 0.720 - - - - - 0.960 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
64. acp1 ENSDARG00000076486 3275 1.678 - 0.759 - - - - 0.919 - - acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
65. SSBP4 ENSDARG00000056483 5156 1.676 - 0.736 - - - - - 0.940 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
66. qars ENSDARG00000010316 2715 1.675 - 0.727 - - - - - 0.948 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
67. mfn1b ENSDARG00000079219 1699 1.671 - 0.741 - - - - 0.930 - - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
68. mrpl12 ENSDARG00000038768 5539 1.67 - 0.729 - - - - 0.941 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
69. calm2b 3890 1.667 0.757 - - - - - 0.910 - - calmodulin 2b, (phosphorylase kinase, delta)
70. tom1 ENSDARG00000104581 1457 1.667 0.736 - - - - - - 0.931 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
71. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.665 - - - - - 0.713 - 0.952 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
72. nudt17 ENSDARG00000008014 479 1.663 - - - - - 0.721 - 0.942 - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
73. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.657 - - - - - - 0.791 0.866 - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
74. fa2h ENSDARG00000090063 1084 1.656 0.735 - - - - - 0.921 - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
75. lsm7 ENSDARG00000058328 7191 1.652 0.844 - - - - - 0.808 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
76. si:ch211-22i13.2 ENSDARG00000043485 4719 1.644 0.736 - - - - - 0.908 - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
77. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.632 0.841 0.791 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
78. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.631 0.831 - - 0.800 - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
79. mycbp ENSDARG00000091001 1511 1.616 0.895 - - - - - - - 0.721 c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
80. ndufa6 ENSDARG00000038028 2653 1.615 - 0.711 - - - - 0.904 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
81. cahz ENSDARG00000011166 5771 1.614 - 0.815 - - - - - 0.799 - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
82. st8sia6 ENSDARG00000021195 2244 1.613 0.854 0.759 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
83. rwdd ENSDARG00000068256 964 1.605 0.845 0.760 - - - - - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
84. cnih cnih 8292 1.605 - 0.809 - - - - 0.796 - -
85. arglu1b ENSDARG00000018319 1110 1.603 0.831 0.772 - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
86. hoxc12b ENSDARG00000103133 1290 1.602 - - 0.783 - 0.819 - - - - homeobox C12b [Source:ZFIN;Acc:ZDB-GENE-000329-17]
87. xpo1a ENSDARG00000078041 3544 1.6 - 0.711 - - - - - 0.889 - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
88. ogn 5002 1.599 - - - - 0.797 0.802 - - - osteoglycin
89. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 1.598 - - - 0.785 - - - 0.813 - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
90. ppp1r3b ENSDARG00000044691, ENSDARG00000110639, ENSDARG00000114900 2990 1.595 - 0.735 - - - - 0.860 - - protein phosphatase 1, regulatory subunit 3B [Source:ZFIN;Acc:ZDB-GENE-030131-5496]
91. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.593 - - 0.768 0.825 - - - - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
92. yth2 yth2 3716 1.593 0.839 0.754 - - - - - - -
93. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.592 - - - - - - 0.797 0.795 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
94. vwde ENSDARG00000103443 5758 1.592 - 0.858 - - - - - 0.734 - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
95. cpsf5 cpsf5 1841 1.592 0.824 0.768 - - - - - - -
96. mef2ca ENSDARG00000029764 18547 1.589 - 0.734 - - - - - 0.855 - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
97. sp5l ENSDARG00000115868 361 1.583 - - 0.803 - 0.780 - - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
98. sf3b5 ENSDARG00000016855 4015 1.581 0.830 0.751 - - - - - - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
99. wnk1b ENSDARG00000039392 3587 1.58 0.761 0.819 - - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
100. CBFA2T3 ENSDARG00000079012 6799 1.575 0.867 0.708 - - - - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]

There are 1891 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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