Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL12A1

Gene Name Gene ID Reads Annotation
COL12A1 ENSGALG00000015908 1300 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]











Genes with expression patterns similar to COL12A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL12A1 ENSGALG00000015908 1300 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
2. CACNA2D2 ENSGALG00000038242 2078 1.778 - - - - - - - 0.874 - 0.904 calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
3. DENND1A ENSGALG00000001157 503 1.7 - - - - - - 0.791 - - 0.909 DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
4. TRMT44 ENSGALG00000015594 1490 1.668 - - 0.737 - - - - - - 0.931 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
5. UBE3C ENSGALG00000006461 57 1.659 - - 0.707 - - - - - - 0.952 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
6. LUZP1 ENSGALG00000025858 947 1.652 - - - - - - 0.723 - - 0.929 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
7. MASP1 ENSGALG00000007419 141 1.618 - - - - - - - 0.704 - 0.914 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
8. HOXA9 ENSGALG00000028983 9298 1.615 - - 0.734 - - - - - - 0.881 homeobox A9 [Source:NCBI gene;Acc:396096]
9. TMEM150C ENSGALG00000011175 218 1.6 - - 0.741 - - - 0.859 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
10. CNTN1 ENSGALG00000009523 158 1.597 - - - - - - 0.823 - - 0.774 contactin 1 [Source:NCBI gene;Acc:417786]
11. ADARB1 ENSGALG00000007527 2480 1.567 - - - - - - 0.726 - - 0.841 adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
12. TAGLN ENSGALG00000011902 12030 1.55 - - - - 0.720 - - - - 0.830 transgelin [Source:NCBI gene;Acc:396490]
13. PCYOX1L ENSGALG00000040340 2162 1.533 - - - - - - 0.809 - - 0.724 prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
14. ADAMTSL1 1479 1.517 - - - - - - 0.811 - - 0.706 ADAMTS like 1, transcript variant X3
15. MICALL1 ENSGALG00000012265 3753 1.463 - - - - - - 0.730 - - 0.733 MICAL like 1 [Source:NCBI gene;Acc:418032]
16. TOR4A ENSGALG00000008623 1364 1.46 - - - - - - 0.734 0.726 - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
17. KRT14 ENSGALG00000003690 682 1.458 - - 0.700 - - - 0.758 - - - keratin 14 [Source:NCBI gene;Acc:408039]
18. CEP76 ENSGALG00000013858 1809 1.444 - - - - - - 0.744 - - 0.700 centrosomal protein 76
19. TCP11L1 ENSGALG00000011688 2427 1.422 - - - - - - - 0.708 - 0.714 t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
20. RP9 ENSGALG00000035453 1186 0.965 - - - - - - - - - 0.965 retinitis pigmentosa 9 (autosomal dominant)
21. TFG ENSGALG00000015299 849 0.96 - - - - - - - - - 0.960 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
22. AGMO ENSGALG00000010792 76 0.959 - - - - - - - - - 0.959 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
23. IFNAR2 ENSGALG00000041867 1596 0.958 - - - - - - - - - 0.958 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
24. EEA1 ENSGALG00000011280 923 0.957 - - - - - - - - - 0.957 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
25. SLC38A1 ENSGALG00000009698 566 0.956 - - - - - - - - - 0.956 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
26. ENSGALG00000004772 ENSGALG00000004772 173 0.956 - - - - - - - - - 0.956
27. ATP2B2 ENSGALG00000030908 584 0.956 - - - - - - - - - 0.956 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
28. BCOR ENSGALG00000016245 85 0.955 - - - - - - - - - 0.955 BCL6 corepressor, transcript variant X8
29. SOS2 ENSGALG00000012273 41 0.954 - - - - - - - - - 0.954 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
30. ENSGALG00000008594 ENSGALG00000008594 54 0.953 - - - - - - - - - 0.953
31. TM6SF2 ENSGALG00000029015 109 0.953 - - - - - - - - - 0.953 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
32. CNKSR3 ENSGALG00000027159 41 0.953 - - - - - - - - - 0.953 CNKSR family member 3, transcript variant X2
33. MAP3K8 ENSGALG00000007356 188 0.952 - - - - - - - - - 0.952 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
34. TTI1 ENSGALG00000006791 1218 0.952 - - - - - - - - - 0.952 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
35. ADAMTS12 55 0.95 - - - - - - - - - 0.950 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
36. TYSND1 ENSGALG00000033807 716 0.949 - - - - - - - - - 0.949 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
37. CEP57 ENSGALG00000017201 524 0.949 - - - - - - - - - 0.949 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
38. ZNF142 ENSGALG00000011393 2078 0.949 - - - - - - - - - 0.949 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
39. DTX2 ENSGALG00000001905 1475 0.949 - - - - - - - - - 0.949 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
40. STX6 3297 0.948 - - - - - - - - - 0.948 syntaxin 6
41. FOXP1 127 0.947 - - - - - - - - - 0.947 forkhead box P1, transcript variant X14
42. ENSGALG00000018358 ENSGALG00000018358 101 0.947 - - - - - - - - - 0.947
43. CCBL2 CCBL2 184 0.947 - - - - - - - - - 0.947
44. RGP1 ENSGALG00000002394 5937 0.947 - - - - - - - - - 0.947 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
45. RPRD2 ENSGALG00000014656 939 0.946 - - - - - - - - - 0.946 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
46. MAP3K3 ENSGALG00000000525 115 0.946 - - - - - - - - - 0.946 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
47. ENSGALG00000027621 ENSGALG00000027621 863 0.945 - - - - - - - - - 0.945
48. SHPK ENSGALG00000004637 2386 0.945 - - - - - - - - - 0.945 sedoheptulokinase, transcript variant X1
49. PKDCCB ENSGALG00000011166 74 0.944 - - - - - - - - - 0.944 protein kinase domain containing, cytoplasmic b
50. C5orf24 ENSGALG00000006371 1573 0.942 - - - - - - - - - 0.942 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
51. PROCR ENSGALG00000006547 645 0.942 - - - - - - - - - 0.942 protein C receptor [Source:NCBI gene;Acc:424867]
52. GPR114 GPR114 46 0.942 - - - - - - - - - 0.942
53. TRIM3 ENSGALG00000034004 110 0.942 - - - - - - - - - 0.942 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
54. PTPRE ENSGALG00000009823 250 0.941 - - - - - - - - - 0.941 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
55. USP36 ENSGALG00000037018 783 0.94 - - - - - - - - - 0.940 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
56. HEATR5A 1233 0.94 - - - - - - - - - 0.940 HEAT repeat containing 5A, transcript variant X7
57. ENSGALG00000004643 ENSGALG00000004643 2297 0.94 - - - - - - - - - 0.940
58. CENPJ ENSGALG00000017148 1415 0.94 - - - - - - - - - 0.940 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
59. EP3 EP3 741 0.939 - - - - - - - - - 0.939
60. PRICKLE1 ENSGALG00000009556 60 0.939 - - - - - - - - - 0.939 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
61. NHLRC2 ENSGALG00000008946 387 0.938 - - - - - - - - - 0.938 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
62. GRPEL2 ENSGALG00000002673 105 0.938 - - - - - - - - - 0.938 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
63. SERPINB6 ENSGALG00000012866 1582 0.938 - - - - - - - - - 0.938 serpin family B member 6 [Source:NCBI gene;Acc:420895]
64. STAT5 STAT5 1796 0.937 - - - - - - - - - 0.937
65. ZFPM2 ENSGALG00000040079 942 0.937 - - - - - - - - - 0.937 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
66. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.936 - - - - - - - - - 0.936 family with sequence similarity 83, member D
67. PLXNA4 ENSGALG00000006473 125 0.936 - - - - - - - - - 0.936 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
68. NFKBIE ENSGALG00000044525 633 0.936 - - - - - - - - - 0.936 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
69. BZFP1 ENSGALG00000027546 632 0.936 - - - - - - - - - 0.936 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
70. SUPV3L1 ENSGALG00000004197 4141 0.935 - - - - - - - - - 0.935 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
71. ENSGALG00000001919 ENSGALG00000001919 531 0.935 - - - - - - - - - 0.935
72. FAM96B 14435 0.935 - - - - - - - - - 0.935 family with sequence similarity 96 member B
73. PCMTD2 ENSGALG00000005901 1833 0.935 - - - - - - - - - 0.935 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
74. AP3B2 2331 0.933 - - - - - - - - - 0.933 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
75. VAV2 ENSGALG00000002699 503 0.933 - - - - - - - - - 0.933 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
76. PDCD7 ENSGALG00000021027 3807 0.932 - - - - - - - - - 0.932 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
77. DGKB ENSGALG00000033561 170 0.931 - - - - - - - - - 0.931 diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
78. CEP55 ENSGALG00000006639 258 0.931 - - - - - - - - - 0.931 centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]
79. TMEM199 ENSGALG00000023757 10781 0.931 - - - - - - - - - 0.931 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
80. TGFB3 ENSGALG00000010346 3118 0.93 - - - - - - - - - 0.930 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
81. TTC3 ENSGALG00000016050 4115 0.93 - - - - - - - - - 0.930 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
82. RASSF8 ENSGALG00000014041 850 0.93 - - - - - - - - - 0.930 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
83. DUSP23 1663 0.93 - - - - - - - - - 0.930 dual specificity phosphatase 23, transcript variant X1
84. CTK-1 CTK-1 1618 0.93 - - - - - - - - - 0.930
85. IWS1 ENSGALG00000001803 2305 0.929 - - - - - - - - - 0.929 IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
86. PDCD4 ENSGALG00000008700 574 0.929 - - - - - - - - - 0.929 programmed cell death 4 [Source:NCBI gene;Acc:374191]
87. TRIP4 ENSGALG00000030672 1255 0.927 - - - - - - - - - 0.927 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
88. ELL2 ENSGALG00000014678 1111 0.926 - - - - - - - - - 0.926 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
89. FTSJ3 ENSGALG00000032993 8929 0.924 - - - - - - - - - 0.924 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
90. PRR11 2624 0.923 - - - - - - - - - 0.923 proline rich 11, transcript variant X8
91. TRIM24 ENSGALG00000012823 2725 0.922 - - - - - - - - - 0.922 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
92. RFWD3 2315 0.922 - - - - - - - - - 0.922 ring finger and WD repeat domain 3
93. INTS8 ENSGALG00000037955 3349 0.921 - - - - - - - - - 0.921 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
94. PMVK ENSGALG00000046656 645 0.919 - - - - - - - - - 0.919 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
95. KIF25 ENSGALG00000011299 2601 0.919 - - - - - - - - - 0.919 kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
96. OBFC1 OBFC1 1071 0.919 - - - - - - - - - 0.919
97. CAPN15 ENSGALG00000002018 3353 0.918 - - - - - - - - - 0.918 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
98. MRPS5 ENSGALG00000008550 1707 0.916 - - - - - - - - - 0.916 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
99. NBN ENSGALG00000037686 648 0.915 - - - - - - - - - 0.915 nibrin [Source:NCBI gene;Acc:374246]
100. TNFRSF21 ENSGALG00000016719 2762 0.915 - - - - - - - - - 0.915 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]

There are 532 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA