Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COBRA1

Gene Name Gene ID Reads Annotation
COBRA1 COBRA1 4600











Genes with expression patterns similar to COBRA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COBRA1 COBRA1 4600 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. RFC1 ENSGALG00000014298 6516 1.686 - - - - - - 0.806 0.880 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
3. BPNT1 ENSGALG00000009576 7445 1.637 - - - - - - 0.819 0.818 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
4. DAD1 ENSGALG00000035626 32604 1.588 - - - - - - 0.746 0.842 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
5. SEC22A ENSGALG00000011697 7981 1.577 - - - - - - 0.722 0.855 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
6. DCPS ENSGALG00000031143 10191 1.577 - - - - - - 0.760 0.817 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
7. MRPL2 ENSGALG00000008597 16500 1.573 - - - - - - 0.804 0.769 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
8. HOXA5 ENSGALG00000025929 6231 1.563 - - - - - - 0.707 0.856 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
9. LLPH ENSGALG00000019358 20976 1.562 - - - - - - 0.843 0.719 - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
10. NDUFA12 ENSGALG00000011325 19807 1.561 - - - - - - 0.814 0.747 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
11. NUP85 ENSGALG00000007974 21249 1.56 - - - - - - 0.752 0.808 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
12. CNI CNI 18453 1.558 - - - - - - 0.786 0.772 - -
13. QTRTD1 QTRTD1 10765 1.555 - - - - - - 0.787 0.768 - -
14. CCNH ENSGALG00000015641 8051 1.553 - - - - - - 0.819 0.734 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
15. FAM18B1 ENSGALG00000001335 5177 1.552 - - - - - - 0.702 0.850 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
16. PTGR1 ENSGALG00000015702 3667 1.55 - - - - - - 0.749 0.801 - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
17. CCNDBP1 ENSGALG00000004837 11520 1.55 - - - - - - 0.798 0.752 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
18. PCTP ENSGALG00000003099 5851 1.543 - - - - - - 0.778 0.765 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
19. RIOK2 ENSGALG00000015288 6280 1.542 - - - - - - 0.799 0.743 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
20. SF3B3 ENSGALG00000002531 19397 1.54 - - - - - - 0.739 0.801 - - splicing factor 3b subunit 3, transcript variant X2
21. MRPL47 ENSGALG00000013759 9044 1.536 - - - - - - 0.753 0.783 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
22. NAA20 ENSGALG00000012587 11349 1.533 - - - - - - 0.728 0.805 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
23. CTSL2 CTSL2 7966 1.53 - - - - - - 0.770 0.760 - -
24. C11H16ORF80 C11H16ORF80 18673 1.529 - - - - - - 0.788 0.741 - -
25. POLR2B ENSGALG00000011387 4864 1.528 - - - - - - 0.803 0.725 - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
26. ADRM1 ENSGALG00000005200 5417 1.521 - - - - - - 0.741 0.780 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
27. BAG5 ENSGALG00000031062 4498 1.521 - - - - - - 0.774 0.747 - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
28. ADI1 ENSGALG00000025796 8636 1.511 - - - - - - 0.714 0.797 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
29. CCNC ENSGALG00000015471 6497 1.507 - - - - - - 0.767 0.740 - - cyclin C [Source:NCBI gene;Acc:421791]
30. ACTR1A ENSGALG00000008086 3145 1.505 - - - - - - 0.729 0.776 - - ARP1 actin related protein 1 homolog A [Source:NCBI gene;Acc:423862]
31. CDK2AP1 ENSGALG00000034919 5469 1.504 - - - - - - 0.711 0.793 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
32. PPAPDC1B PPAPDC1B 6698 1.503 - - - - - - 0.778 0.725 - -
33. MFAP1 ENSGALG00000028295 6043 1.496 - - - - - - 0.706 0.790 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
34. YRDC ENSGALG00000029001 6529 1.494 - - - - - - 0.730 0.764 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
35. FANCL ENSGALG00000030022 7423 1.494 - - - - - - 0.733 0.761 - - FA complementation group L [Source:NCBI gene;Acc:421202]
36. R3HDM1 ENSGALG00000012246 6580 1.491 - - - - - - 0.782 0.709 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
37. FAM177A1 ENSGALG00000010046 4318 1.49 - - - - - - 0.730 0.760 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
38. KLHL21 ENSGALG00000035211 6145 1.484 - - - - - - 0.707 0.777 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
39. RAB18 ENSGALG00000007435 3589 1.481 - - - - - - 0.769 0.712 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
40. IFT46 ENSGALG00000007438 4094 1.468 - - - - - - 0.716 0.752 - - intraflagellar transport 46, transcript variant X1
41. ATP6AP1 ENSGALG00000008836 4343 1.463 - - - - - - 0.716 0.747 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
42. MRPS30 ENSGALG00000014874 3416 1.462 - - - - - - 0.756 0.706 - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
43. RPP40 ENSGALG00000036074 2068 1.457 - - - - - - 0.735 0.722 - - ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992]
44. RRP1B ENSGALG00000035696 12309 1.454 - - - - - - 0.740 0.714 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
45. EXOSC9 ENSGALG00000011884 3403 1.452 - - - - - - 0.736 0.716 - - exosome component 9 [Source:NCBI gene;Acc:619530]
46. CCNG2 ENSGALG00000010347 9122 1.452 - - - - - - 0.739 0.713 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
47. LCLAT1 ENSGALG00000009056 5207 1.451 - - - - - - 0.714 0.737 - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
48. IREB2 ENSGALG00000035462 10659 1.449 - - - - - - 0.727 0.722 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
49. PLAA ENSGALG00000001782 5459 1.448 - - - - - - 0.741 0.707 - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
50. SASS6 ENSGALG00000005302 4029 1.448 - - - - - - 0.716 0.732 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
51. HCCS ENSGALG00000005571 4939 1.445 - - - - - - 0.722 0.723 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
52. MAFF ENSGALG00000012277 3392 1.439 - - - - - - 0.728 0.711 - - MAF bZIP transcription factor F [Source:NCBI gene;Acc:395519]
53. ACER3 ENSGALG00000000755 5761 1.417 - - - - - - 0.715 0.702 - - alkaline ceramidase 3 [Source:HGNC Symbol;Acc:HGNC:16066]
54. KTN1 ENSGALG00000012137 4058 1.417 - - - - - - 0.714 0.703 - - kinectin 1 [Source:NCBI gene;Acc:396335]
55. ENY2 ENSGALG00000036618 30314 1.416 - - - - 0.706 - 0.710 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
56. GABPB1 ENSGALG00000023440 5676 1.413 - - - - - - 0.711 0.702 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
57. WSB2 ENSGALG00000008151 13246 1.412 - - - - - - 0.707 0.705 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
58. ENSGALG00000007514 ENSGALG00000007514 4866 1.406 - - - - - - 0.705 0.701 - -
59. LSM5 ENSGALG00000041625 22307 0.904 - - - - - - 0.904 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
60. DJ-1 DJ-1 13462 0.891 - - - - - - - 0.891 - -
61. ASUN ASUN 17129 0.884 - - - - - - 0.884 - - -
62. MZT1 ENSGALG00000016932 9269 0.875 - - - - - - 0.875 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
63. ERLIN2 ENSGALG00000003092 18251 0.867 - - - - - - - 0.867 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
64. CSE1L ENSGALG00000004707 20653 0.859 - - - - - - 0.859 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
65. BLMH ENSGALG00000004259 36907 0.859 - - - - - - - 0.859 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
66. PARP1 ENSGALG00000009228 39433 0.857 - - - - - - 0.857 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
67. EBNA1BP2 ENSGALG00000009045 17453 0.855 - - - - - - 0.855 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
68. CTNNBL1 ENSGALG00000006817 6765 0.855 - - - - - - - 0.855 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
69. NUDT7 ENSGALG00000034395 7396 0.855 - - - - - - - 0.855 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
70. RAB5C ENSGALG00000003359 5597 0.854 - - - - - - - 0.854 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
71. ASAP1 ENSGALG00000037618 2887 0.848 - - - - - - 0.848 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
72. PEMT ENSGALG00000004875 4094 0.847 - - - - - - - 0.847 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
73. HSCB ENSGALG00000005706 12953 0.838 - - - - - - - 0.838 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
74. GCSH ENSGALG00000032679 29231 0.838 - - - - - - - 0.838 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
75. PPP2R5D ENSGALG00000040005 6804 0.838 - - - - - - 0.838 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
76. EMC3 ENSGALG00000003738 10363 0.836 - - - - - - - 0.836 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
77. SIVA1 ENSGALG00000011619 15130 0.836 - - - - - - 0.836 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
78. TM4SF18 4553 0.836 - - - - - - - 0.836 - - transmembrane 4 L six family member 18, transcript variant X2
79. FCF1 ENSGALG00000010275 24928 0.833 - - - - - - 0.833 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
80. KLHDC4 ENSGALG00000037315 9828 0.833 - - - - - - 0.833 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
81. YWHAZ ENSGALG00000031387 84985 0.831 - - - - - - 0.831 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
82. MAP4K3 ENSGALG00000039720 5124 0.831 - - - - - - 0.831 - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
83. C1H12ORF23 C1H12ORF23 13234 0.829 - - - - - - 0.829 - - -
84. TDP2 ENSGALG00000013637 6595 0.827 - - - - - - - 0.827 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
85. TPRKB ENSGALG00000013018 8687 0.827 - - - - - - 0.827 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
86. FXR1 ENSGALG00000008864 10250 0.827 - - - - - - 0.827 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
87. DCTD ENSGALG00000010674 8396 0.825 - - - - - - - 0.825 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
88. RABGGTB ENSGALG00000011388 11654 0.823 - - - - - - 0.823 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
89. CHMP6 ENSGALG00000026428 18026 0.822 - - - - - - 0.822 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
90. SIPA1L1 ENSGALG00000009381 4019 0.822 - - - - - - - 0.822 - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
91. RCN2 ENSGALG00000039284 17848 0.821 - - - - - - - 0.821 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
92. KCTD7 ENSGALG00000002618 2182 0.82 - - - - - - 0.820 - - - potassium channel tetramerization domain containing 7 [Source:NCBI gene;Acc:417547]
93. AIMP2 ENSGALG00000003400 12655 0.82 - - - - - - 0.820 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
94. SH3BGRL ENSGALG00000007128 18708 0.819 - - - - - - - 0.819 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
95. ATP5J 14451 0.819 - - - - - - - 0.819 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
96. EIF4A2 ENSGALG00000008684 58507 0.817 - - - - - - 0.817 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
97. NDUFS5 ENSGALG00000003625 27698 0.815 - - - - - - - 0.815 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
98. GLRX3 ENSGALG00000010464 22578 0.815 - - - - - - 0.815 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
99. RRP36 ENSGALG00000028056 7560 0.815 - - - - - - - 0.815 - - ribosomal RNA processing 36
100. INTS2 ENSGALG00000005269 6966 0.815 - - - - - - 0.815 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]

There are 691 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA