Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CNGA3

Gene Name Gene ID Reads Annotation
CNGA3 ENSGALG00000039826 3 cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]











Genes with expression patterns similar to CNGA3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CNGA3 ENSGALG00000039826 3 3 - - - - 1.000 1.000 - - - 1.000 cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
2. GTPBP6 ENSGALG00000016717 17 1.734 - - - - - 0.903 - - - 0.831 GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
3. RIBC2 ENSGALG00000014232 13 1.719 - - - - - 0.947 - - - 0.772 RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
4. INSC ENSGALG00000032558 74 1.622 - - - - - 0.889 - - - 0.733 INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
5. PIGH ENSGALG00000009510 13 1 - - - - 1.000 - - - - - phosphatidylinositol glycan anchor biosynthesis class H [Source:NCBI gene;Acc:423271]
6. LDLRAD3 ENSGALG00000038913 4 1 - - - - - 1.000 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
7. CILP ENSGALG00000007358 20 1 - - - - - - - - - 1.000 cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
8. ENSGALG00000027026 ENSGALG00000027026 3 1 - - - - 1.000 - - - - -
9. PELI2 ENSGALG00000012124 7 1 - - - - - - - - - 1.000 pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
10. EMID1 4 1 - - - - - - - - - 1.000 EMI domain containing 1, transcript variant X5
11. PTPN23 ENSGALG00000038522 93 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
12. gga-mir-196-1 ENSGALG00000018313 2 1 - - - - - - - - - 1.000 gga-mir-196-1 [Source:miRBase;Acc:MI0001268]
13. SLC30A2 ENSGALG00000010375 44 1 - - - - - - - - - 1.000 solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
14. PRIMA1 ENSGALG00000020392 13 1 - - - - - - - - - 1.000 proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
15. UROS ENSGALG00000013688 10 1 - - - - - - - - - 1.000 uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]
16. CDCP2 ENSGALG00000010752 4 1 - - - - - - - - - 1.000 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
17. TRAIL-LIKE ENSGALG00000007240 8 1 - - - - - 1.000 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
18. ENSGALG00000025761 ENSGALG00000025761 6 1 - - - - - - - - - 1.000
19. CABP7 ENSGALG00000040463 1 1 - - - - - - - - - 1.000 calcium binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20834]
20. KIAA1958 ENSGALG00000023083 1 1 - - - - - - - - - 1.000 KIAA1958 [Source:HGNC Symbol;Acc:HGNC:23427]
21. NKX2-5 ENSGALG00000002886 81 1 - - - - - 1.000 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
22. TTC29 ENSGALG00000010009 4 1 - - - - 1.000 - - - - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
23. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - - - 1.000
24. FXYD2 ENSGALG00000007320 168 1 - - - - - 1.000 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
25. RBM47 ENSGALG00000014267 6 1 - - - - - 1.000 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
26. FRMD6 ENSGALG00000012374 1 1 - - - - - - - - - 1.000 FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]
27. ENSGALG00000023704 ENSGALG00000023704 2 1 - - - - - - - - - 1.000
28. ENSGALG00000027018 ENSGALG00000027018 12 1 - - - - - - - - - 1.000
29. ARHGAP31 ENSGALG00000015077 19 1 - - - - 1.000 - - - - - Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:HGNC:29216]
30. CCDC176 CCDC176 10 1 - - - - 1.000 - - - - -
31. gga-mir-6579-2 ENSGALG00000035346 7 1 - - - - - 1.000 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
32. GGT5 ENSGALG00000040504 24 1 - - - - - 1.000 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
33. ENSGALG00000023526 ENSGALG00000023526 10 1 - - - - - - - - - 1.000
34. HTR1D ENSGALG00000000820 1 1 - - - - 1.000 - - - - - 5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
35. ARSA ENSGALG00000035824 299 1 - - - - 1.000 - - - - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
36. MILR1 ENSGALG00000046212 7 1 - - - - - - - - - 1.000 mast cell immunoglobulin-like receptor 1, transcript variant X3
37. HINT2 ENSGALG00000027418 10 1 - - - - - - - - - 1.000 histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18344]
38. IL4I1 ENSGALG00000000081 1 1 - - - - - - - - - 1.000 interleukin 4 induced 1 [Source:NCBI gene;Acc:417039]
39. SPTBN5 395 1 - - - - - 1.000 - - - - spectrin beta, non-erythrocytic 5
40. GPR114 GPR114 46 1 - - - - - 1.000 - - - -
41. C1orf112 ENSGALG00000032743 8 1 - - - - 1.000 - - - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
42. LRMP ENSGALG00000014011 2 1 - - - - - - - - - 1.000 lymphoid restricted membrane protein [Source:HGNC Symbol;Acc:HGNC:6690]
43. ENSGALG00000028531 ENSGALG00000028531 2 1 - - - - - - - - - 1.000
44. ACACB 6 1 - - - - 1.000 - - - - - acetyl-CoA carboxylase beta
45. AMZ1 ENSGALG00000004358 2 1 - - - - - - - - - 1.000 archaelysin family metallopeptidase 1
46. TTC28 ENSGALG00000005676 36 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
47. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - 1.000 - - - -
48. HAPLN4 ENSGALG00000026563 9 1 - - - - - 1.000 - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
49. BARX1 ENSGALG00000035557 2 1 - - - - 1.000 - - - - - BARX homeobox 1 [Source:NCBI gene;Acc:374017]
50. SLC30A1 ENSGALG00000009858 5 1 - - - - - 1.000 - - - - solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
51. ENSGALG00000021375 ENSGALG00000021375 1 1 - - - - - 1.000 - - - -
52. TMEM200A ENSGALG00000002282 77 1 - - - - 1.000 - - - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
53. Six3os1 Six3os1 1 1 - - - - - 1.000 - - - -
54. FIP1L1 ENSGALG00000013943 15 1 - - - - - 1.000 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
55. LOC415661 ENSGALG00000021451 15 1 - - - - 1.000 - - - - - uncharacterized oxidoreductase-like
56. SYT15 ENSGALG00000002046 3 1 - - - - - 1.000 - - - - synaptotagmin 15, transcript variant X1
57. EDNRB2 ENSGALG00000007466 1 1 - - - - - 1.000 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
58. RASGRP3 ENSGALG00000010435 19 1 - - - - 1.000 - - - - - RAS guanyl releasing protein 3 [Source:NCBI gene;Acc:421460]
59. TRPM1 ENSGALG00000003849 5 1 - - - - - - - - - 1.000 transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
60. ENSGALG00000020819 ENSGALG00000020819 2 1 - - - - - 1.000 - - - -
61. GPATCH2L ENSGALG00000010350 8 1 - - - - 1.000 - - - - - G-patch domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:20210]
62. KLHL1 ENSGALG00000016907 21 1 - - - - - 1.000 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
63. ENSGALG00000018528 ENSGALG00000018528 1 1 - - - - - 1.000 - - - -
64. RASSF6 ENSGALG00000011664 7 1 - - - - - 1.000 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
65. ESAM ENSGALG00000032943 1 1 - - - - - 1.000 - - - - endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:17474]
66. LFABP LFABP 5 1 - - - - - 1.000 - - - -
67. ENSGALG00000026341 ENSGALG00000026341 1 1 - - - - - 1.000 - - - -
68. NT5E ENSGALG00000015833 5 1 - - - - 1.000 - - - - - 5'-nucleotidase ecto
69. SNORA50 SNORA50 9 1 - - - - - - - - - 1.000
70. EFCAB12 EFCAB12 15 0.983 - - - - - 0.983 - - - -
71. CMTR2 ENSGALG00000002356 3 0.979 - - - - - 0.979 - - - - cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
72. RECQL5 ENSGALG00000002424 16 0.979 - - - - - 0.979 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
73. FZD1 ENSGALG00000009064 76 0.974 - - - - - 0.974 - - - - frizzled class receptor 1 [Source:NCBI gene;Acc:374062]
74. UROC1 ENSGALG00000006306 75 0.973 - - - - - 0.973 - - - - urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
75. HECTD3L ENSGALG00000010203 83 0.965 - - - - - - - - - 0.965 E3 ubiquitin-protein ligase HECTD3-like, transcript variant X2
76. AMPD1 ENSGALG00000002082 228 0.962 - - - - - 0.962 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
77. ENSGALG00000027170 ENSGALG00000027170 6 0.954 - - - - - 0.954 - - - -
78. MYO1D ENSGALG00000000674 14 0.947 - - - - - 0.947 - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
79. MBTPS2 ENSGALG00000016382 259 0.944 - - - - - 0.944 - - - - membrane bound transcription factor peptidase, site 2 [Source:HGNC Symbol;Acc:HGNC:15455]
80. TNIP2 ENSGALG00000015666 28 0.941 - - - - - 0.941 - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
81. CELF2 ENSGALG00000034590 31 0.94 - - - - 0.940 - - - - - CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:374111]
82. SGIP1 ENSGALG00000011113 20 0.929 - - - - - - - - - 0.929 SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
83. ENSGALG00000018621 ENSGALG00000018621 8 0.929 - - - - - - - - - 0.929
84. CEP170B ENSGALG00000011639 71 0.921 - - - - - 0.921 - - - - centrosomal protein 170B, transcript variant X13
85. SMG7 ENSGALG00000004667 707 0.918 - - - - - 0.918 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
86. MYOM2 ENSGALG00000016342 62 0.916 - - - - 0.916 - - - - - myomesin 2 [Source:NCBI gene;Acc:396034]
87. CTLA4 ENSGALG00000008666 5 0.916 - - - - 0.916 - - - - - cytotoxic T-lymphocyte associated protein 4 [Source:NCBI gene;Acc:424106]
88. KLF11 ENSGALG00000016440 65 0.916 - - - - 0.916 - - - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
89. SLC35F4 ENSGALG00000012094 30 0.909 - - - - - - - - - 0.909 solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
90. ATP11C ENSGALG00000006623 163 0.906 - - - - 0.906 - - - - - ATPase phospholipid transporting 11C [Source:HGNC Symbol;Acc:HGNC:13554]
91. SYNPO2L ENSGALG00000005207 60 0.906 - - - - 0.906 - - - - - synaptopodin 2 like [Source:HGNC Symbol;Acc:HGNC:23532]
92. HPS6 ENSGALG00000020741 4 0.903 - - - - - 0.903 - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
93. RAI1 ENSGALG00000004888 14 0.897 - - - - - - - - - 0.897 retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
94. TNR ENSGALG00000004526 6 0.892 - - - - - 0.892 - - - - tenascin R [Source:NCBI gene;Acc:396213]
95. SPERT ENSGALG00000016981 145 0.889 - - - - - 0.889 - - - - spermatid associated [Source:NCBI gene;Acc:418848]
96. LRAT ENSGALG00000009276 220 0.882 - - - - - 0.882 - - - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
97. FAM199X ENSGALG00000008872 44 0.881 - - - - 0.881 - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
98. LOC101747660 ENSGALG00000027822 4 0.878 - - - - - - - - - 0.878 uncharacterized LOC101747660
99. ENSGALG00000001754 ENSGALG00000001754 45 0.875 - - - - - - - - - 0.875
100. HOXB4 ENSGALG00000000284 16 0.874 - - - - - - - - - 0.874 homeobox B4 [Source:NCBI gene;Acc:396230]

There are 87 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA