Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CNBP

Gene Name Gene ID Reads Annotation
CNBP 42704 CCHC-type zinc finger nucleic acid binding protein, transcript variant X7











Genes with expression patterns similar to CNBP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CNBP 42704 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
2. ACTR6 ENSGALG00000040976 31271 1.786 - - - - 0.805 - 0.981 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
3. CCT5 ENSGALG00000013041 56190 1.776 - - - - - 0.796 0.980 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
4. ZC3H15 ENSGALG00000041857 19808 1.696 - - - - 0.872 - - - - 0.824 zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
5. MRPS36 ENSGALG00000014789 7584 1.687 - - 0.702 - - - 0.985 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
6. UTP15 ENSGALG00000013510 13122 1.623 - - - - 0.878 - - - - 0.745 UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
7. MRPL20 ENSGALG00000001542 28764 1.619 - - - - 0.835 0.784 - - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
8. LSM6 ENSGALG00000009985 18582 1.613 - - - - 0.840 - - 0.773 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
9. GOLGA7 ENSGALG00000003483 26525 1.562 - - - - 0.787 - - 0.775 - - golgin A7 [Source:NCBI gene;Acc:426787]
10. HSP90AA1 ENSGALG00000033212 55740 1.557 - - - - 0.781 0.776 - - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
11. C5H14ORF166 C5H14ORF166 24176 1.537 - - - - 0.821 - - - - 0.716
12. HNRNPDL ENSGALG00000023199 112033 1.441 - - - - 0.708 0.733 - - - - heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
13. ABRACL ENSGALG00000013826 19445 0.995 - - - - - - 0.995 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
14. MRPS15 ENSGALG00000044433 15356 0.994 - - - - - - 0.994 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
15. MOB4 ENSGALG00000008128 10322 0.993 - - - - - - 0.993 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
16. USO1 ENSGALG00000010878 9506 0.992 - - - - - - 0.992 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
17. CDC5L ENSGALG00000016704 22893 0.992 - - - - - - 0.992 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
18. LOC424109 ENSGALG00000008738 3932 0.991 - - - - - - 0.991 - - - alpha-aspartyl dipeptidase
19. MYBL2 ENSGALG00000003503 15875 0.991 - - - - - - 0.991 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
20. COMMD8 ENSGALG00000026279 13509 0.991 - - - - - - 0.991 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
21. FHL3 ENSGALG00000035187 9753 0.989 - - - - - - 0.989 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
22. DIS3 ENSGALG00000016930 3696 0.988 - - - - - - 0.988 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
23. GCAT ENSGALG00000012312 7906 0.988 - - - - - - 0.988 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
24. GLT8D1 ENSGALG00000001642 4232 0.988 - - - - - - 0.988 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
25. SERBP1 ENSGALG00000011229 30489 0.988 - - - - - - 0.988 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
26. PPP3CB ENSGALG00000005243 8794 0.988 - - - - - - 0.988 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
27. C6H10ORF32 C6H10ORF32 7694 0.987 - - - - - - 0.987 - - -
28. RPF1 ENSGALG00000008796 9809 0.987 - - - - - - 0.987 - - - ribosome production factor 1 homolog
29. GALNTL4 GALNTL4 3548 0.987 - - - - - - 0.987 - - -
30. CCDC90B ENSGALG00000037072 5088 0.986 - - - - - - 0.986 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
31. TTF1 4214 0.986 - - - - - - 0.986 - - - transcription termination factor 1
32. ENSGALG00000006730 ENSGALG00000006730 3695 0.985 - - - - - - 0.985 - - -
33. APITD1 APITD1 11830 0.985 - - - - - - 0.985 - - -
34. gga-mir-1723 ENSGALG00000025386 6662 0.985 - - - - - - 0.985 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
35. MMADHC ENSGALG00000012473 9026 0.985 - - - - - - 0.985 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
36. CTNNBL1 ENSGALG00000006817 6765 0.984 - - - - - - 0.984 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
37. CCAR1 ENSGALG00000004108 13219 0.984 - - - - - - 0.984 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
38. RNF13 ENSGALG00000010411 8749 0.983 - - - - - - 0.983 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
39. EPHA3 ENSGALG00000015403 9811 0.983 - - - - - - 0.983 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
40. PRKG1 ENSGALG00000003805 4654 0.983 - - - - - - 0.983 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
41. POLR2C ENSGALG00000001168 10703 0.983 - - - - - - 0.983 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
42. ZNF276 ENSGALG00000000513 2410 0.982 - - - - - - 0.982 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
43. ANLN 10479 0.982 - - - - - - 0.982 - - - anillin actin binding protein, transcript variant X2
44. SNAPIN ENSGALG00000026796 11155 0.981 - - - - - - 0.981 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
45. ATPAF2 ENSGALG00000004926 3393 0.981 - - - - - - 0.981 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
46. CRAC1A CRAC1A 5265 0.981 - - - - - - 0.981 - - -
47. ENSGALG00000013825 ENSGALG00000013825 16473 0.981 - - - - - - 0.981 - - -
48. CHL1 ENSGALG00000037856 1565 0.98 - - - - - - 0.980 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
49. PSMD13 ENSGALG00000043684 14720 0.98 - - - - - - 0.980 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
50. SAV1 ENSGALG00000012341 3313 0.98 - - - - - - 0.980 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
51. LOC425795 ENSGALG00000027696 2357 0.98 - - - - - - 0.980 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
52. CSDE1 ENSGALG00000002139 1683 0.979 - - - - - - 0.979 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
53. RPUSD4 ENSGALG00000024326 3788 0.979 - - - - - - 0.979 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
54. LYVE1 ENSGALG00000005643 1230 0.979 - - - - - - 0.979 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
55. DNAJC10 ENSGALG00000008862 3114 0.979 - - - - - - 0.979 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
56. FGD5 ENSGALG00000008546 4031 0.979 - - - - - - 0.979 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
57. LHFPL2 ENSGALG00000004437 500 0.978 - - - - - - 0.978 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
58. MAPT ENSGALG00000000625 659 0.978 - - - - - - 0.978 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
59. LUZP2 ENSGALG00000030151 585 0.978 - - - - - - 0.978 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
60. NOB1 ENSGALG00000000693 15442 0.978 - - - - - - 0.978 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
61. MRPS26 ENSGALG00000014118 27422 0.976 - - - - - - 0.976 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
62. POLB ENSGALG00000040828 7462 0.975 - - - - - - 0.975 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
63. SPINT1 ENSGALG00000008469 5735 0.975 - - - - - - 0.975 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
64. PELI1 ENSGALG00000008837 11561 0.974 - - - - - - 0.974 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
65. GDPD4 ENSGALG00000000690 824 0.973 - - - - - - 0.973 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
66. SH3RF3 ENSGALG00000016810 2169 0.972 - - - - - - 0.972 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
67. MRPS34 ENSGALG00000001792 14262 0.972 - - - - - - 0.972 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
68. GSDMA ENSGALG00000013495 1650 0.972 - - - - - - 0.972 - - - gasdermin A [Source:NCBI gene;Acc:426132]
69. ENSGALG00000000360 ENSGALG00000000360 15320 0.968 - - - - - - 0.968 - - -
70. TBL1X ENSGALG00000040006 28597 0.967 - - - - - - 0.967 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
71. TP53INP1 ENSGALG00000041353 6890 0.967 - - - - - - 0.967 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
72. BUB3 ENSGALG00000009681 36055 0.964 - - - - - - 0.964 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
73. HDLBP ENSGALG00000005823 24636 0.963 - - - - - - 0.963 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
74. ZDHHC6 ENSGALG00000008870 16575 0.959 - - - - - - 0.959 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
75. PRDX1 ENSGALG00000010243 151918 0.958 - - - - - - 0.958 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
76. TRIB2 ENSGALG00000016457 17641 0.958 - - - - - - 0.958 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
77. EZH2 ENSGALG00000043399 15881 0.957 - - - - - - 0.957 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
78. TPI1 ENSGALG00000014526 43273 0.955 - - - - - - 0.955 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
79. MED1 ENSGALG00000001708 9556 0.949 - - - - - - 0.949 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
80. EXOSC7 ENSGALG00000030084 8654 0.949 - - - - - - 0.949 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
81. VDAC3 ENSGALG00000041463 21595 0.946 - - - - - - 0.946 - - - voltage dependent anion channel 3, transcript variant X9
82. TRA2A ENSGALG00000010973 37101 0.941 - - - - - - 0.941 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
83. TAF12 ENSGALG00000000991 8709 0.939 - - - - - - 0.939 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
84. STAG2 ENSGALG00000008482 13629 0.938 - - - - - - 0.938 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
85. DDX18 ENSGALG00000012147 12463 0.938 - - - - - - 0.938 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
86. LOC407092 ENSGALG00000013809 10706 0.937 - - - - - - 0.937 - - - AD012Z, transcript variant X5
87. SNX17 ENSGALG00000032468 13519 0.936 - - - - - - 0.936 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
88. SNRPB2 28675 0.922 - - - - - - 0.922 - - - small nuclear ribonucleoprotein polypeptide B2
89. ARGLU1 ENSGALG00000016855 25633 0.921 - - - - - - 0.921 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
90. WDR36 ENSGALG00000000247 11277 0.917 - - - - 0.917 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
91. WLS ENSGALG00000011238 20969 0.912 - - - - - - 0.912 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
92. CHPKCI CHPKCI 36217 0.912 - - - - - - 0.912 - - -
93. EIF3J ENSGALG00000008187 43570 0.904 - - - - 0.904 - - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
94. SH3GLB1 ENSGALG00000006284 12764 0.897 - - - - 0.897 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
95. ASPM ENSGALG00000032398 12784 0.895 - - - - 0.895 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
96. GCSH ENSGALG00000032679 29231 0.895 - - - - 0.895 - - - - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
97. RAB11B ENSGALG00000000613 20696 0.894 - - - - 0.894 - - - - - RAB11B, member RAS oncogene family [Source:NCBI gene;Acc:420063]
98. COPB2 ENSGALG00000005357 15208 0.894 - - - - 0.894 - - - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
99. UBE2N ENSGALG00000030515 32059 0.893 - - - - - - 0.893 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
100. TMED2 ENSGALG00000003307 20704 0.893 - - - - 0.893 - - - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]

There are 268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA