Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CMSS1

Gene Name Gene ID Reads Annotation
CMSS1 ENSGALG00000015267 2954 cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]











Genes with expression patterns similar to CMSS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CMSS1 ENSGALG00000015267 2954 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
2. DIEXF ENSGALG00000009887 4782 1.732 - - - - - - 0.889 0.843 - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
3. ALDH5A1 ENSGALG00000032544 4924 1.731 - - - - - - 0.775 0.956 - - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
4. CHCHD3 ENSGALG00000006489 18592 1.667 - - - 0.866 - - 0.801 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
5. SNORA31 SNORA31 183 1.658 - - - 0.824 - - 0.834 - - -
6. NUP205 ENSGALG00000011662 4157 1.631 - - - 0.760 - - 0.871 - - - nucleoporin 205
7. IDI1 ENSGALG00000006723 7761 1.603 - - - 0.788 - - 0.815 - - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
8. ATG4B ENSGALG00000006298 2288 1.596 - - - 0.823 - - 0.773 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
9. ZCCHC2 ENSGALG00000012889 3163 1.575 - - - 0.729 - - 0.846 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
10. LYAR ENSGALG00000015000 10756 1.567 - - - 0.712 - - 0.855 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
11. CANX ENSGALG00000032148 11297 1.562 - - - 0.702 - - 0.860 - - - calnexin [Source:NCBI gene;Acc:416288]
12. DBNDD2 ENSGALG00000003921 8301 1.546 - - - 0.710 - - 0.836 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
13. CACYBP ENSGALG00000004554 7320 1.536 - - - 0.776 - - 0.760 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
14. IGDCC4 ENSGALG00000007410 5457 1.531 - - - - - - 0.746 0.785 - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
15. USB1 ENSGALG00000035604 4003 1.529 - - - 0.740 - - 0.789 - - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
16. HTATSF1 ENSGALG00000006410 3526 1.523 - - - 0.701 - - 0.822 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
17. POGZ ENSGALG00000036365 4056 0.954 - - - - - - - 0.954 - - pogo transposable element with ZNF domain, transcript variant X2
18. PEX13 ENSGALG00000007832 3416 0.937 - - - - - - - 0.937 - - peroxisomal biogenesis factor 13 [Source:NCBI gene;Acc:421197]
19. TTK ENSGALG00000015874 1610 0.934 - - - - - - - 0.934 - - TTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]
20. MMS22L ENSGALG00000015513 2089 0.916 - - - - - - - 0.916 - - MMS22 like, DNA repair protein [Source:HGNC Symbol;Acc:HGNC:21475]
21. MED16 ENSGALG00000001978 2387 0.915 - - - - - - 0.915 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
22. CDC73 ENSGALG00000002469 4586 0.91 - - - - - - 0.910 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
23. USP54 ENSGALG00000005232 2749 0.907 - - - - - - 0.907 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
24. COPS8 ENSGALG00000033385 10166 0.905 - - - - - - 0.905 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
25. BMI1 ENSGALG00000041267 6618 0.902 - - - - - - 0.902 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
26. EIF3I ENSGALG00000003337 28832 0.901 - - - - - - 0.901 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
27. RBL1 ENSGALG00000001332 2568 0.899 - - - - - - 0.899 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
28. ASB6 ENSGALG00000004378 1080 0.899 - - - - - - 0.899 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
29. PGAP2 ENSGALG00000027762 2583 0.897 - - - - - - 0.897 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
30. MTDH ENSGALG00000034050 9525 0.897 - - - - - - 0.897 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
31. FAM193A ENSGALG00000015667 3075 0.894 - - - - - - 0.894 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
32. DUSP19 ENSGALG00000043268 5543 0.892 - - - - - - - 0.892 - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
33. PAPD7 ENSGALG00000013061 2031 0.891 - - - - - - 0.891 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
34. IFT74 ENSGALG00000001801 1932 0.89 - - - - - - 0.890 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
35. SQLE ENSGALG00000036915 4172 0.89 - - - - - - 0.890 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
36. SUN1 ENSGALG00000003781 3442 0.889 - - - - - - 0.889 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
37. WIPI1 ENSGALG00000004215 3359 0.887 - - - - - - 0.887 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
38. WDR47 ENSGALG00000002129 2624 0.887 - - - - - - 0.887 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
39. CSTF3 ENSGALG00000011685 4711 0.884 - - - - - - 0.884 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
40. RCAN3 ENSGALG00000004282 7778 0.883 - - - - - - 0.883 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
41. ERMP1 ENSGALG00000000438 1136 0.883 - - - - - - 0.883 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
42. ENSGALG00000028164 ENSGALG00000028164 3325 0.883 - - - - - - 0.883 - - -
43. CEP290 ENSGALG00000011177 1559 0.882 - - - - - - 0.882 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
44. CDC42SE2 ENSGALG00000027258 4725 0.882 - - - - - - 0.882 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
45. PEX16 ENSGALG00000008421 3684 0.88 - - - - - - 0.880 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
46. DCLK2 ENSGALG00000032386 2253 0.88 - - - - - - 0.880 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
47. TM2D3 ENSGALG00000026271 2566 0.879 - - - - - - 0.879 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
48. CCNL1 ENSGALG00000009699 1033 0.878 - - - - - - 0.878 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
49. RNASEH1 ENSGALG00000016389 2694 0.877 - - - - - - 0.877 - - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
50. MRPL10 ENSGALG00000014387 12386 0.877 - - - - - - 0.877 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
51. CCNE2 ENSGALG00000040794 1229 0.877 - - - - - - 0.877 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
52. C5H15ORF29 C5H15ORF29 3709 0.876 - - - - - - 0.876 - - -
53. SELM SELM 6366 0.876 - - - - - - 0.876 - - -
54. SPAG9 ENSGALG00000034001 2314 0.875 - - - - - - 0.875 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
55. ARNT2 ENSGALG00000006445 7050 0.874 - - - - - - - 0.874 - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
56. LONP1 ENSGALG00000040492 7133 0.873 - - - - - - 0.873 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
57. FAM57A ENSGALG00000004820 1492 0.873 - - - - - - 0.873 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
58. BCAR3 358 0.871 - - - - - - - 0.871 - - breast cancer anti-estrogen resistance 3, transcript variant X9
59. NEK4 ENSGALG00000041428 4473 0.87 - - - - - - 0.870 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
60. NSG1 ENSGALG00000015010 5829 0.87 - - - - - - 0.870 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
61. NIN ENSGALG00000012361 2284 0.869 - - - - - - 0.869 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
62. PARL ENSGALG00000002315 15943 0.869 - - - - - - 0.869 - - - presenilin associated rhomboid like
63. PKN3 532 0.869 - - - - - - 0.869 - - - protein kinase N3, transcript variant X2
64. HESX1 ENSGALG00000005506 203 0.869 - - - - - - 0.869 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
65. SRP72 ENSGALG00000011403 13666 0.868 - - - - - - 0.868 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
66. MBTPS1 ENSGALG00000003293 4843 0.867 - - - - - - 0.867 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
67. HELLS ENSGALG00000005451 7094 0.866 - - - - - - 0.866 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
68. SUGP1 ENSGALG00000042132 2771 0.866 - - - - - - 0.866 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
69. MORC3 ENSGALG00000036556 2976 0.866 - - - - - - 0.866 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
70. ZYX ENSGALG00000014688 8686 0.865 - - - - - - 0.865 - - - zyxin [Source:NCBI gene;Acc:418300]
71. NCAPG2 ENSGALG00000006525 2319 0.865 - - - - - - 0.865 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
72. MBNL2 ENSGALG00000016890 3162 0.864 - - - - - - 0.864 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
73. RNF20 ENSGALG00000015548 7199 0.864 - - - - - - 0.864 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
74. SCLT1 2397 0.864 - - - - - - 0.864 - - - sodium channel and clathrin linker 1, transcript variant X6
75. GPN3 ENSGALG00000003807 6320 0.864 - - - - - - 0.864 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
76. SPG11 ENSGALG00000008180 1890 0.864 - - - - - - 0.864 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
77. NDRG3 ENSGALG00000001492 5919 0.863 - - - - - - 0.863 - - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
78. C14orf80 C14orf80 1921 0.863 - - - - - - 0.863 - - -
79. SCAF4 ENSGALG00000033965 2027 0.863 - - - - - - 0.863 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
80. NPHP4 ENSGALG00000000966 1698 0.862 - - - - - - 0.862 - - - nephrocystin 4, transcript variant X5
81. DHRS11 ENSGALG00000005403 2936 0.862 - - - 0.862 - - - - - - dehydrogenase/reductase 11 [Source:NCBI gene;Acc:395172]
82. FN3KRP ENSGALG00000028979 4160 0.861 - - - - - - 0.861 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
83. RAB1A ENSGALG00000031582 6929 0.861 - - - - - - 0.861 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
84. ALDH18A1 ENSGALG00000034655 3038 0.86 - - - - - - 0.860 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
85. ZFYVE19 ENSGALG00000008460 2750 0.86 - - - - - - 0.860 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
86. INTS7 ENSGALG00000009843 2395 0.86 - - - - - - 0.860 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
87. SGSM3 ENSGALG00000012033 1839 0.859 - - - - - - 0.859 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
88. IK ENSGALG00000037172 12100 0.858 - - - - - - 0.858 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
89. PDHX ENSGALG00000033753 2799 0.858 - - - - - - 0.858 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
90. NEFM ENSGALG00000000317 6992 0.858 - - - - - - 0.858 - - - neurofilament medium [Source:NCBI gene;Acc:396206]
91. SLC25A36 ENSGALG00000005283 4221 0.858 - - - - - - - 0.858 - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
92. FTSJ2 FTSJ2 2951 0.857 - - - - - - 0.857 - - -
93. ENSGALG00000013233 ENSGALG00000013233 3265 0.857 - - - - - - 0.857 - - -
94. ITSN1 ENSGALG00000036677 5727 0.856 - - - - - - 0.856 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
95. FEN1 ENSGALG00000033781 16551 0.855 - - - - - - 0.855 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
96. LSM10 ENSGALG00000002127 2519 0.855 - - - - - - 0.855 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
97. NT5C2 ENSGALG00000008179 1760 0.855 - - - - - - 0.855 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
98. GGA.8379 GGA.8379 4419 0.854 - - - - - - 0.854 - - -
99. ROR1 ENSGALG00000011019 2155 0.854 - - - - - - 0.854 - - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
100. SRPK1 ENSGALG00000037546 1849 0.853 - - - - - - 0.853 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]

There are 432 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA