Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CLRN1

Gene Name Gene ID Reads Annotation
CLRN1 ENSGALG00000010384 7 clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]











Genes with expression patterns similar to CLRN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CLRN1 ENSGALG00000010384 7 3 - - - 1.000 - 1.000 1.000 - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
2. NIPA1 ENSGALG00000039811 20 1.711 - - - 0.971 - 0.740 - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
3. APOPT1 ENSGALG00000044519 193 1 - - - - - - 1.000 - - - apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20492]
4. SMAD9 ENSGALG00000017050 11 1 - - - - - - 1.000 - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
5. CRLF1 ENSGALG00000026146 1 1 - - - - - - 1.000 - - - cytokine receptor like factor 1 [Source:HGNC Symbol;Acc:HGNC:2364]
6. TNFRSF6B ENSGALG00000006106 12 1 - - - - - - 1.000 - - - TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
7. TEKT4 ENSGALG00000005247 20 1 - - - 1.000 - - - - - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
8. LVRN ENSGALG00000002318 14 1 - - - - - - 1.000 - - - laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
9. OCSTAMP ENSGALG00000044719 10 1 - - - - - - 1.000 - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
10. BTBD6 ENSGALG00000033813 163 1 - - - - - - 1.000 - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
11. ENSGALG00000025765 ENSGALG00000025765 1 1 - - - - - - 1.000 - - -
12. RAB37 ENSGALG00000027789 17 1 - - - - - - 1.000 - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
13. CACNA1C ENSGALG00000013022 322 1 - - - - - - 1.000 - - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
14. NTN1 ENSGALG00000023626 12 1 - - - - - - 1.000 - - - netrin 1 [Source:NCBI gene;Acc:396389]
15. SLCO1B1 ENSGALG00000019276 7 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
16. NR4A3 ENSGALG00000013568 1 1 - - - - - - 1.000 - - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
17. MCOLN3 ENSGALG00000008709 21 1 - - - - - - 1.000 - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
18. SLC16A3 ENSGALG00000002728 323 1 - - - 1.000 - - - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
19. MED12 ENSGALG00000036322 814 1 - - - - - - 1.000 - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
20. ST8SIA1 ENSGALG00000013211 14 1 - - - 1.000 - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
21. ENSGALG00000011799 ENSGALG00000011799 37 1 - - - - - - 1.000 - - -
22. CDKL5 ENSGALG00000016529 26 1 - - - - - - 1.000 - - - cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
23. C1S ENSGALG00000014603 80 1 - - - - - - 1.000 - - - complement C1s [Source:NCBI gene;Acc:418294]
24. AOX1 ENSGALG00000008185 14 1 - - - - - - 1.000 - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
25. DPYS ENSGALG00000039011 54 1 - - - - - - 1.000 - - - dihydropyrimidinase [Source:NCBI gene;Acc:420266]
26. FBXO43 ENSGALG00000038940 7 1 - - - - - - 1.000 - - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
27. SS2 ENSGALG00000003034 277 1 - - - - - - 1.000 - - - somatostatin II [Source:NCBI gene;Acc:395106]
28. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - - 1.000 - - -
29. LRCH3 ENSGALG00000007595 21 1 - - - - - - 1.000 - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
30. TBC1D20 ENSGALG00000006201 6 1 - - - - - - 1.000 - - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
31. FYCO1 ENSGALG00000040212 75 1 - - - - - - 1.000 - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
32. GPR183 ENSGALG00000016881 5 1 - - - 1.000 - - - - - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
33. DMGDH ENSGALG00000004491 15 1 - - - - - - 1.000 - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
34. LRRC58 ENSGALG00000033186 15 1 - - - - - - 1.000 - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
35. CAPN9 158 1 - - - - - - 1.000 - - - calpain 9
36. PIRT 41 1 - - - - - - 1.000 - - - phosphoinositide-interacting regulator of transient receptor potential channels
37. ZDHHC16 ENSGALG00000007592 19 1 - - - - - - 1.000 - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
38. CA13 ENSGALG00000033428 1 1 - - - - - - 1.000 - - - carbonic anhydrase 13 [Source:HGNC Symbol;Acc:HGNC:14914]
39. IRF-4 IRF-4 19 1 - - - - - - 1.000 - - -
40. CFI ENSGALG00000012126 20 1 - - - - - - 1.000 - - - complement factor I [Source:NCBI gene;Acc:428773]
41. RAB11FIP1 41 1 - - - - - - 1.000 - - - RAB11 family interacting protein 1, transcript variant X2
42. MUC16 3 1 - - - 1.000 - - - - - - mucin 16, cell surface associated
43. KLHL30 ENSGALG00000006260 32 1 - - - - - - 1.000 - - - kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
44. ZNF469 ENSGALG00000026534 8 1 - - - - - - 1.000 - - - zinc finger protein 469, transcript variant X3
45. SLC12A5 ENSGALG00000042199 1 1 - - - - - - 1.000 - - - solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]
46. MYO19 9 1 - - - - - - 1.000 - - - myosin XIX, transcript variant X5
47. RBM15 ENSGALG00000000401 22 1 - - - - - - 1.000 - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
48. SLC6A6 ENSGALG00000006425 31 1 - - - - - - 1.000 - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
49. SNORD103 SNORD103 25 1 - - - - - - 1.000 - - -
50. SNORA81 SNORA81 15 0.995 - - - 0.995 - - - - - -
51. SERAC1 ENSGALG00000013732 24 0.969 - - - - - 0.969 - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
52. LRRC52 ENSGALG00000003443 20 0.965 - - - 0.965 - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
53. BEST3 ENSGALG00000010029 11 0.955 - - - 0.955 - - - - - - bestrophin 3 [Source:NCBI gene;Acc:417849]
54. STEAP1 ENSGALG00000009006 16 0.955 - - - 0.955 - - - - - - STEAP family member 1
55. TYRO3 ENSGALG00000008631 23 0.923 - - - 0.923 - - - - - - TYRO3 protein tyrosine kinase [Source:NCBI gene;Acc:395336]
56. EVX1 ENSGALG00000037310 1974 0.917 - - - 0.917 - - - - - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
57. OCM2 ENSGALG00000003465 74 0.881 - - - 0.881 - - - - - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
58. DYNC2LI1 ENSGALG00000009954 38 0.853 - - - - - 0.853 - - - - dynein cytoplasmic 2 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:24595]
59. CYP2J19 ENSGALG00000011413 22 0.842 - - - 0.842 - - - - - - cytochrome P450, family 2, subfamily J, polypeptide 19
60. SBDS ENSGALG00000027989 112 0.838 - - - 0.838 - - - - - - SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
61. DOCK11 ENSGALG00000006017 20 0.837 - - - 0.837 - - - - - - dedicator of cytokinesis 11 [Source:HGNC Symbol;Acc:HGNC:23483]
62. MAPK1 ENSGALG00000001501 34 0.831 - - - 0.831 - - - - - - mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
63. GRIA4 ENSGALG00000038995 29 0.825 - - - 0.825 - - - - - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
64. XK ENSGALG00000016262 60 0.822 - - - 0.822 - - - - - - X-linked Kx blood group [Source:NCBI gene;Acc:427991]
65. NCAPH2 228 0.82 - - - 0.820 - - - - - - non-SMC condensin II complex subunit H2, transcript variant X15
66. PDE6H ENSGALG00000025735 37 0.82 - - - 0.820 - - - - - - phosphodiesterase 6H [Source:NCBI gene;Acc:378929]
67. SSPN ENSGALG00000014042 638 0.811 - - - 0.811 - - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
68. HSF3 ENSGALG00000040662 140 0.81 - - - 0.810 - - - - - - Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
69. RANBP17 47 0.802 - - - 0.802 - - - - - - RAN binding protein 17
70. SPHKAP ENSGALG00000002974 80 0.788 - - - 0.788 - - - - - - SPHK1 interactor, AKAP domain containing [Source:NCBI gene;Acc:424789]
71. FRA10AC1 ENSGALG00000006622 286 0.785 - - - - - 0.785 - - - - FRA10A associated CGG repeat 1 [Source:HGNC Symbol;Acc:HGNC:1162]
72. SLC16A9 ENSGALG00000003172 266 0.78 - - - - - 0.780 - - - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
73. EPHX1 ENSGALG00000009291 46 0.78 - - - 0.780 - - - - - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
74. gga-mir-6567 ENSGALG00000028837 210 0.779 - - - 0.779 - - - - - - gga-mir-6567 [Source:miRBase;Acc:MI0022384]
75. TRIM63 ENSGALG00000034107 524 0.778 - - - 0.778 - - - - - - tripartite motif containing 63 [Source:HGNC Symbol;Acc:HGNC:16007]
76. GNAI1 ENSGALG00000008382 195 0.777 - - - - - 0.777 - - - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
77. MRC1 ENSGALG00000008629 259 0.774 - - - 0.774 - - - - - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
78. MSANTD3 ENSGALG00000013403 85 0.769 - - - 0.769 - - - - - - Myb/SANT DNA binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23370]
79. ATP10D ENSGALG00000014192 94 0.768 - - - 0.768 - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
80. ENSGALG00000001754 ENSGALG00000001754 45 0.766 - - - 0.766 - - - - - -
81. SLC16A5 ENSGALG00000007955 25 0.765 - - - 0.765 - - - - - - solute carrier family 16 member 5 [Source:HGNC Symbol;Acc:HGNC:10926]
82. NFATC3 ENSGALG00000003396 40 0.761 - - - 0.761 - - - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
83. OSTF1 ENSGALG00000017447 39 0.759 - - - - - 0.759 - - - - osteoclast stimulating factor 1 [Source:NCBI gene;Acc:427258]
84. ACOT9 ENSGALG00000016351 330 0.755 - - - 0.755 - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
85. DPY19L3 ENSGALG00000004559 40 0.751 - - - 0.751 - - - - - - dpy-19 like C-mannosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:27120]
86. IL2RG ENSGALG00000005638 21 0.75 - - - - - - 0.750 - - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
87. CRHR1 ENSGALG00000000371 94 0.75 - - - 0.750 - - - - - - corticotropin releasing hormone receptor 1 [Source:NCBI gene;Acc:374218]
88. GHSR ENSGALG00000027947 24 0.742 - - - - - 0.742 - - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
89. BEGAIN ENSGALG00000011236 35 0.742 - - - - - 0.742 - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
90. LRRC47 7 0.742 - - - - - 0.742 - - - - leucine rich repeat containing 47
91. ENSGALG00000009227 ENSGALG00000009227 2 0.742 - - - - - 0.742 - - - -
92. SUSD4 ENSGALG00000009388 48 0.742 - - - - - 0.742 - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
93. ENSGALG00000016257 ENSGALG00000016257 4 0.742 - - - - - 0.742 - - - -
94. NLGN3 ENSGALG00000005553 4 0.742 - - - - - 0.742 - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
95. ENSGALG00000020459 ENSGALG00000020459 3 0.742 - - - - - 0.742 - - - -
96. SLC24A1 ENSGALG00000007495 3 0.742 - - - - - 0.742 - - - - solute carrier family 24 member 1 [Source:NCBI gene;Acc:414892]
97. ATP12A ENSGALG00000006469 7 0.742 - - - - - 0.742 - - - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
98. U4atac U4atac 23 0.742 - - - - - 0.742 - - - -
99. GPR6 ENSGALG00000015068 2 0.742 - - - - - 0.742 - - - - G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:HGNC:4515]
100. ENSGALG00000017269 ENSGALG00000017269 13 0.742 - - - - - 0.742 - - - -

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA