Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CLPX

Gene Name Gene ID Reads Annotation
CLPX ENSGALG00000007289 6348 caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]











Genes with expression patterns similar to CLPX

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CLPX ENSGALG00000007289 6348 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
2. SRFBP1 ENSGALG00000005316 6826 1.476 - - - - - - 0.747 0.729 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
3. YOD1 ENSGALG00000037597 2989 1.47 - - - - - - 0.746 0.724 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
4. NXT2 ENSGALG00000008092 2477 1.46 - - - - - - 0.700 - 0.760 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
5. LDLRAP1 ENSGALG00000001051 1657 1.443 - - - - - - 0.716 0.727 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
6. SPRYD7 ENSGALG00000017010 1910 1.441 - - - - - - 0.717 0.724 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
7. LTN1 ENSGALG00000015804 3784 1.435 - - - - - - 0.708 0.727 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
8. AHR ENSGALG00000010836 2276 1.42 - - - - - - 0.704 0.716 - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
9. FAM193A ENSGALG00000015667 3075 0.972 - - - - - - - 0.972 - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
10. GPR125 GPR125 2753 0.97 - - - - - - - 0.970 - -
11. KIAA2026 ENSGALG00000015050 4659 0.965 - - - - - - - 0.965 - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
12. DUSP7 ENSGALG00000041650 1946 0.964 - - - - - - - 0.964 - - Gallus gallus dual specificity phosphatase 7 (DUSP7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318409]
13. YWHAQ ENSGALG00000016433 3450 0.957 - - - - - - - 0.957 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
14. BAIAP2 ENSGALG00000042538 1365 0.948 - - - - - - - 0.948 - - BAI1 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:947]
15. Sep-15 Sep-15 6935 0.935 - - - - - - - 0.935 - -
16. CENPE ENSGALG00000013208 12337 0.934 - - - - - - - 0.934 - - centromere protein E, transcript variant X4
17. CCNG1 ENSGALG00000001718 9873 0.93 - - - - - - - 0.930 - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
18. SNX17 ENSGALG00000032468 13519 0.904 - - - - - - - 0.904 - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
19. GMPS ENSGALG00000010284 8765 0.896 - - - - - - - 0.896 - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
20. MED28 ENSGALG00000007138 7686 0.886 - - - - - - - 0.886 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
21. SLC25A36 ENSGALG00000005283 4221 0.884 - - - - - - 0.884 - - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
22. PRMT3 ENSGALG00000003958 14160 0.884 - - - - - - - 0.884 - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
23. FKBP7 ENSGALG00000009149 6742 0.877 - - - - - - 0.877 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
24. CIB1 ENSGALG00000008302 13946 0.871 - - - - - - 0.871 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
25. RUVBL1 ENSGALG00000005931 9379 0.852 - - - - - - - 0.852 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
26. RBM26 ENSGALG00000016910 13769 0.844 - - - - - - - 0.844 - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
27. RB1CC1 ENSGALG00000015259 4211 0.837 - - - - - - 0.837 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
28. MCAT ENSGALG00000034275 4598 0.835 - - - - - - 0.835 - - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
29. RPAP3 ENSGALG00000009743 3380 0.832 - - - - - - 0.832 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
30. SEC22A ENSGALG00000011697 7981 0.826 - - - - - - 0.826 - - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
31. IMPG2 ENSGALG00000015322 74 0.826 - - - - - - - - 0.826 - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
32. PPIG ENSGALG00000009839 24114 0.825 - - - - - - - 0.825 - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
33. HCCS ENSGALG00000005571 4939 0.823 - - - - - - 0.823 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
34. LCLAT1 ENSGALG00000009056 5207 0.822 - - - - - - 0.822 - - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
35. FARP1 ENSGALG00000016886 13132 0.822 - - - - - - 0.822 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
36. DERL1 ENSGALG00000033950 15074 0.821 - - - - - - 0.821 - - - derlin 1 [Source:NCBI gene;Acc:420350]
37. gga-mir-6587 ENSGALG00000026386 9441 0.818 - - - - - - 0.818 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
38. PPIE ENSGALG00000013383 3923 0.817 - - - - - - 0.817 - - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
39. GPALPP1 ENSGALG00000031567 4221 0.817 - - - - - - 0.817 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
40. TMED7 ENSGALG00000028484 21008 0.814 - - - - - - - 0.814 - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
41. DNAJC11 ENSGALG00000000627 769 0.811 - - - - - - - - 0.811 - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
42. AP2A2 ENSGALG00000006799 13874 0.808 - - - - - - 0.808 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
43. MGAT4B ENSGALG00000005924 2663 0.808 - - - - - - 0.808 - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
44. LRIG3 ENSGALG00000009755 6655 0.806 - - - - - - 0.806 - - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
45. ARHGAP21 ENSGALG00000007721 3961 0.806 - - - - - - 0.806 - - - Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
46. TWISTNB ENSGALG00000010863 7563 0.805 - - - - - - 0.805 - - - TWIST neighbor [Source:NCBI gene;Acc:420603]
47. MICU3 ENSGALG00000013661 1466 0.804 - - - - - - 0.804 - - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
48. RELL1 ENSGALG00000014336 2950 0.801 - - - - - - 0.801 - - - RELT like 1 [Source:NCBI gene;Acc:422795]
49. PDCD7 ENSGALG00000021027 3807 0.801 - - - - - - 0.801 - - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
50. LIMD1 ENSGALG00000035623 7282 0.8 - - - - - - 0.800 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
51. AMACR ENSGALG00000003326 2657 0.799 - - - - - - 0.799 - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
52. MRPL38 ENSGALG00000002194 6648 0.796 - - - - - - 0.796 - - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
53. NSUN2 ENSGALG00000013064 2005 0.796 - - - - - - 0.796 - - - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
54. PMP22 ENSGALG00000031425 5358 0.792 - - - - - - 0.792 - - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
55. MPDZ ENSGALG00000005846 3179 0.789 - - - - - - 0.789 - - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
56. CDC42EP4 ENSGALG00000023364 9240 0.789 - - - - - - 0.789 - - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
57. SLC39A9 ENSGALG00000009438 4838 0.788 - - - - - - 0.788 - - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
58. BCL2L1 ENSGALG00000006211 2490 0.788 - - - - - - 0.788 - - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
59. BRP44 BRP44 17093 0.787 - - - - - - 0.787 - - -
60. ACTN1 ENSGALG00000042458 10477 0.787 - - - - - - 0.787 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
61. BNIP3L ENSGALG00000043405 10316 0.787 - - - - - - 0.787 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
62. PTPRK ENSGALG00000037423 3688 0.787 - - - - - - 0.787 - - - protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
63. CYB5R2 ENSGALG00000032372 7967 0.786 - - - - - - 0.786 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
64. FAM107B ENSGALG00000033226 1539 0.786 - - - - - - 0.786 - - - family with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]
65. TMEM115 ENSGALG00000026965 13050 0.785 - - - - - - 0.785 - - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
66. ENSGALG00000009771 ENSGALG00000009771 10273 0.784 - - - - - - 0.784 - - -
67. CRY2 ENSGALG00000008436 1732 0.783 - - - - - - 0.783 - - - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
68. SURF1 ENSGALG00000033754 2130 0.783 - - - - - - 0.783 - - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
69. HAPLN1 ENSGALG00000015627 14942 0.782 - - - - - - 0.782 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
70. RCSD1 ENSGALG00000040275 6581 0.782 - - - - - - - 0.782 - - RCSD domain containing 1 [Source:NCBI gene;Acc:418443]
71. ENSGALG00000028657 ENSGALG00000028657 1664 0.782 - - - - - - - - 0.782 -
72. BCLAF1 ENSGALG00000013935 7596 0.782 - - - - - - 0.782 - - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
73. UMPS ENSGALG00000011770 11331 0.781 - - - - - - 0.781 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
74. ORC3 ENSGALG00000015800 4316 0.781 - - - - - - 0.781 - - - origin recognition complex subunit 3 [Source:NCBI gene;Acc:421822]
75. RGL1 ENSGALG00000004728 3004 0.78 - - - - - - 0.780 - - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
76. C5orf28 C5orf28 6585 0.779 - - - - - - 0.779 - - -
77. METTL8 ENSGALG00000009564 912 0.778 - - - - - - 0.778 - - - methyltransferase like 8 [Source:HGNC Symbol;Acc:HGNC:25856]
78. CISD2 ENSGALG00000027860 12968 0.776 - - - - - - - 0.776 - - CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]
79. FAM195A 4642 0.776 - - - - - - 0.776 - - - family with sequence similarity 195, member A
80. FAM214A ENSGALG00000042839 3378 0.775 - - - - - - 0.775 - - - family with sequence similarity 214 member A [Source:NCBI gene;Acc:415416]
81. ITGB1 ENSGALG00000007145 19551 0.775 - - - - - - 0.775 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
82. RSRC1 ENSGALG00000009669 5829 0.775 - - - - - - 0.775 - - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
83. SART3 ENSGALG00000039472 4948 0.774 - - - - - - 0.774 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
84. CHD7 ENSGALG00000041080 10201 0.773 - - - - - - - 0.773 - - chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]
85. MBNL3 ENSGALG00000032045 10980 0.772 - - - - - - 0.772 - - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
86. USP15 ENSGALG00000030024 2761 0.772 - - - - - - 0.772 - - - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
87. FIG4 ENSGALG00000015070 3018 0.772 - - - - - - - - 0.772 - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
88. KIF21B ENSGALG00000034347 4144 0.771 - - - - - - 0.771 - - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
89. C5orf22 ENSGALG00000012909 3537 0.771 - - - - - - - - 0.771 - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
90. TBCK ENSGALG00000010564 1546 0.771 - - - - - - 0.771 - - - TBC1 domain containing kinase [Source:NCBI gene;Acc:422534]
91. MED14 ENSGALG00000016238 4685 0.771 - - - - - - 0.771 - - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
92. CPT1A ENSGALG00000007077 3199 0.771 - - - - - - 0.771 - - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
93. MOCS2 ENSGALG00000014906 4974 0.77 - - - - - - 0.770 - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
94. ENSGALG00000001754 ENSGALG00000001754 45 0.77 - - - - - - - - 0.770 -
95. OPA1 ENSGALG00000007150 5488 0.77 - - - - - - 0.770 - - - OPA1, mitochondrial dynamin like GTPase [Source:NCBI gene;Acc:424900]
96. TRAF7 ENSGALG00000005767 4615 0.768 - - - - - - 0.768 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
97. COL18A1 ENSGALG00000038311 11934 0.767 - - - - - - 0.767 - - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
98. SMC4 ENSGALG00000009553 15715 0.767 - - - - - - 0.767 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
99. PTEN ENSGALG00000003634 5048 0.766 - - - - - - 0.766 - - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
100. MAP2K2 ENSGALG00000001267 3857 0.765 - - - - - - 0.765 - - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]

There are 358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA