Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CLK3

Gene Name Gene ID Reads Annotation
CLK3 ENSGALG00000001362 2171 CDC like kinase 3 [Source:NCBI gene;Acc:415295]











Genes with expression patterns similar to CLK3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CLK3 ENSGALG00000001362 2171 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC like kinase 3 [Source:NCBI gene;Acc:415295]
2. GNMT ENSGALG00000043290 3288 1.604 - - - - - - 0.894 0.710 - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
3. DTX2 ENSGALG00000001905 1475 0.991 - - - - - - 0.991 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
4. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.991 - - - - - - 0.991 - - - pseudouridylate synthase-like 1, transcript variant X8
5. LPXN 133 0.99 - - - - - - 0.990 - - - leupaxin, transcript variant X4
6. KLF11 ENSGALG00000016440 65 0.989 - - - - - - 0.989 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
7. ARHGEF3 ENSGALG00000005481 683 0.989 - - - - - - 0.989 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
8. SRA1 ENSGALG00000040453 266 0.989 - - - - - - 0.989 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
9. TP53BP1 ENSGALG00000042201 708 0.989 - - - - - - 0.989 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
10. PIGF ENSGALG00000020057 201 0.989 - - - - - - 0.989 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
11. C7orf63 C7orf63 147 0.987 - - - - - - 0.987 - - -
12. PTDSS2 ENSGALG00000004300 682 0.987 - - - - - - 0.987 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
13. SLC28A3 ENSGALG00000012593 131 0.986 - - - - - - 0.986 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
14. BCAR3 358 0.986 - - - - - - 0.986 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
15. BBS4 ENSGALG00000001798 667 0.985 - - - - - - 0.985 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
16. FXYD6 ENSGALG00000025937 4073 0.985 - - - - - - 0.985 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
17. ASTN2 ENSGALG00000007038 1748 0.984 - - - - - - 0.984 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
18. FDFT1 ENSGALG00000016665 3053 0.984 - - - - - - 0.984 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
19. C11H19ORF12 C11H19ORF12 5149 0.984 - - - - - - 0.984 - - -
20. C7orf55 C7orf55 7083 0.984 - - - - - - 0.984 - - -
21. TNFRSF11B ENSGALG00000043167 911 0.983 - - - - - - 0.983 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
22. YWHAQ ENSGALG00000016433 3450 0.983 - - - - - - 0.983 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
23. HYAL1 ENSGALG00000000785 1778 0.98 - - - - - - 0.980 - - - hyaluronoglucosaminidase 1, transcript variant X3
24. LRR1 ENSGALG00000012230 1062 0.98 - - - - - - 0.980 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
25. IWS1 ENSGALG00000001803 2305 0.978 - - - - - - 0.978 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
26. RFFL ENSGALG00000002225 928 0.978 - - - - - - 0.978 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
27. PIGL ENSGALG00000004492 669 0.978 - - - - - - 0.978 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
28. WHSC1 1712 0.978 - - - - - - 0.978 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
29. CLASP1 ENSGALG00000011645 1378 0.978 - - - - - - 0.978 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
30. ANGPTL2 ENSGALG00000000927 2580 0.977 - - - - - - 0.977 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
31. MYH15 ENSGALG00000015358 6304 0.977 - - - - - - 0.977 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
32. PRDM10 632 0.974 - - - - - - 0.974 - - - PR domain 10, transcript variant X10
33. TUFT1 ENSGALG00000032955 1317 0.974 - - - - - - 0.974 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
34. ESCO1 ENSGALG00000014936 739 0.972 - - - - - - 0.972 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
35. MRM1 ENSGALG00000039523 2009 0.972 - - - - - - 0.972 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
36. TTI1 ENSGALG00000006791 1218 0.969 - - - - - - 0.969 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
37. BTBD7 4136 0.969 - - - - - - 0.969 - - - BTB domain containing 7, transcript variant X2
38. THOC3 ENSGALG00000024172 7617 0.968 - - - - - - 0.968 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
39. EML1 1941 0.964 - - - - - - 0.964 - - - echinoderm microtubule associated protein like 1, transcript variant X11
40. COL17A1 ENSGALG00000029617 167 0.963 - - - - - - 0.963 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
41. ZNF830 ENSGALG00000013156 3896 0.963 - - - - - - 0.963 - - - zinc finger protein 830
42. GADD45 GADD45 8780 0.962 - - - - - - 0.962 - - -
43. AP1S3 ENSGALG00000005171 2981 0.961 - - - - - - 0.961 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
44. LMX1A ENSGALG00000003424 335 0.96 - - - - - - 0.960 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
45. C9orf85 ENSGALG00000026001 4110 0.96 - - - - - - 0.960 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
46. OSBPL1A ENSGALG00000015086 2702 0.959 - - - - - - 0.959 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
47. MITF ENSGALG00000039583 865 0.959 - - - - - - 0.959 - - - melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
48. PYCR1 ENSGALG00000007300 7987 0.959 - - - - - - 0.959 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
49. ACTR10 ENSGALG00000012041 2752 0.958 - - - - - - 0.958 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
50. AP1AR ENSGALG00000028807 2398 0.957 - - - - - - 0.957 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
51. NRCAM ENSGALG00000009514 490 0.957 - - - - - - 0.957 - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
52. SUMF1 ENSGALG00000008286 941 0.956 - - - - - - 0.956 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
53. EFNB1 ENSGALG00000036539 2706 0.956 - - - - - - 0.956 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
54. NUDCD1 ENSGALG00000040879 2965 0.955 - - - - - - 0.955 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
55. C12orf66 ENSGALG00000027682 2110 0.955 - - - - - - 0.955 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
56. APCDD1 ENSGALG00000000894 1482 0.954 - - - - - - 0.954 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
57. LMO4 ENSGALG00000006252 3686 0.954 - - - - - - 0.954 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
58. BEND5 ENSGALG00000010505 3298 0.953 - - - - - - 0.953 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
59. ABHD13 ENSGALG00000016853 4975 0.95 - - - - - - 0.950 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
60. FREM3 ENSGALG00000020561 1824 0.948 - - - - - - 0.948 - - - FRAS1 related extracellular matrix 3
61. CRELD2 ENSGALG00000008551 2084 0.947 - - - - - - 0.947 - - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
62. SDK1 ENSGALG00000004420 571 0.947 - - - - - - 0.947 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
63. NAPEPLD ENSGALG00000008285 1295 0.947 - - - - - - 0.947 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
64. CLN6 ENSGALG00000007981 5656 0.946 - - - - - - 0.946 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
65. COL22A1 ENSGALG00000038022 544 0.946 - - - - - - 0.946 - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
66. SLC25A48 ENSGALG00000006341 2606 0.946 - - - - - - 0.946 - - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
67. SEL1L3 ENSGALG00000039549 1400 0.945 - - - - - - 0.945 - - - SEL1L family member 3 [Source:HGNC Symbol;Acc:HGNC:29108]
68. OSBPL8 ENSGALG00000010246 4565 0.944 - - - - - - 0.944 - - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
69. ANXA11 ENSGALG00000043826 5189 0.944 - - - - - - 0.944 - - - annexin A11 [Source:NCBI gene;Acc:423637]
70. CAPN1 ENSGALG00000041685 4011 0.943 - - - - - - 0.943 - - - calpain 1 [Source:NCBI gene;Acc:693249]
71. DDX42 ENSGALG00000000581 8780 0.939 - - - - - - 0.939 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
72. SLAIN1 ENSGALG00000016913 461 0.938 - - - - - - 0.938 - - - SLAIN motif family member 1 [Source:HGNC Symbol;Acc:HGNC:26387]
73. TAF1B ENSGALG00000016437 2318 0.938 - - - - - - 0.938 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
74. BSDC1 ENSGALG00000003405 3701 0.938 - - - - - - 0.938 - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
75. CCDC137 ENSGALG00000004505 2205 0.937 - - - - - - 0.937 - - - coiled-coil domain containing 137 [Source:HGNC Symbol;Acc:HGNC:33451]
76. RAD51A RAD51A 2132 0.936 - - - - - - 0.936 - - -
77. LYRM4 ENSGALG00000027339 2917 0.936 - - - - - - 0.936 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
78. ARL6IP4 ENSGALG00000003682 2467 0.935 - - - - - - 0.935 - - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
79. UHMK1 ENSGALG00000002734 2308 0.934 - - - - - - 0.934 - - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
80. ZDHHC13 ENSGALG00000004085 1802 0.934 - - - - - - 0.934 - - - zinc finger DHHC-type containing 13 [Source:NCBI gene;Acc:422980]
81. FAM86A FAM86A 1860 0.932 - - - - - - 0.932 - - -
82. MPPE1 ENSGALG00000013794 988 0.93 - - - - - - 0.930 - - - metallophosphoesterase 1 [Source:NCBI gene;Acc:421031]
83. TIRAP ENSGALG00000040224 2578 0.93 - - - - - - 0.930 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
84. SQSTM1 ENSGALG00000035804 2238 0.93 - - - - - - 0.930 - - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
85. ZER1 ENSGALG00000004659 1635 0.93 - - - - - - 0.930 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
86. NARFL ENSGALG00000005365 2668 0.93 - - - - - - 0.930 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
87. C9H21ORF2 C9H21ORF2 3161 0.93 - - - - - - 0.930 - - -
88. TMEM14A ENSGALG00000019894 5279 0.929 - - - - - - 0.929 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
89. ZBTB26 ENSGALG00000042762 1920 0.928 - - - - - - 0.928 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
90. RHOT2 ENSGALG00000002497 1744 0.928 - - - - - - 0.928 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
91. GNE ENSGALG00000015331 1577 0.926 - - - - - - 0.926 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
92. USP25 ENSGALG00000015693 2567 0.926 - - - - - - 0.926 - - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
93. RNF144A ENSGALG00000028709 2855 0.925 - - - - - - 0.925 - - - ring finger protein 144A, transcript variant X1
94. ETV5 ENSGALG00000005768 9679 0.924 - - - - - - 0.924 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
95. RAD17 ENSGALG00000015571 1374 0.923 - - - - - - 0.923 - - - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
96. QRICH1 ENSGALG00000006867 2031 0.923 - - - - - - 0.923 - - - glutamine rich 1 [Source:NCBI gene;Acc:100858758]
97. FAM53A ENSGALG00000015713 3795 0.923 - - - - - - 0.923 - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
98. TAGLN3 ENSGALG00000015379 7865 0.922 - - - - - - 0.922 - - - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
99. EPB41L1 ENSGALG00000034171 3616 0.921 - - - - - - 0.921 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
100. GLTPD1 GLTPD1 2968 0.92 - - - - - - 0.920 - - -

There are 230 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA