Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CLIP4

Gene Name Gene ID Reads Annotation
CLIP4 ENSDARG00000096961 363 CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]










Genes with expression patterns similar to CLIP4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CLIP4 ENSDARG00000096961 363 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
2. lrp12 ENSDARG00000098845 999 1.842 - - 0.997 - - 0.845 - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
3. zgc:113227 ENSDARG00000058874 266 1.758 - - 0.997 - - 0.761 - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
4. inip ENSDARG00000028523 1925 1.753 - - 0.994 - - 0.759 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
5. CU467832.1 CU467832.1 635 1.729 - 0.733 0.996 - - - - - -
6. pdzrn3b ENSDARG00000073869 1566 1.701 - 0.710 0.991 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
7. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.694 - 0.769 0.925 - - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
8. appbp2 ENSDARG00000007566 1961 1.678 - - 0.971 - - 0.707 - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
9. TMEM17 ENSDARG00000116334 218 1.655 - - - - - 0.785 0.870 - - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
10. PMFBP1 ENSDARG00000101917 292 1.474 - - - - - - 0.704 0.770 - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
11. sgce ENSDARG00000012138 912 1.456 0.713 - - - - 0.743 - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
12. commd9 ENSDARG00000094258, ENSDARG00000111031 49 1.449 - 0.741 - - - - 0.708 - - COMM domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070424-139]
13. vipas39 ENSDARG00000103690 280 0.998 - - 0.998 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
14. gata1b ENSDARG00000059130 151 0.998 - - 0.998 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
15. zgc:171673 ENSDARG00000102473 256 0.998 - - 0.998 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
16. mfsd4a mfsd4a 179 0.998 - - 0.998 - - - - - -
17. pld1b ENSDARG00000057125 325 0.998 - - 0.998 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
18. RAB39B RAB39B 482 0.997 - - 0.997 - - - - - -
19. DNAJC16 ENSDARG00000059699 507 0.997 - - 0.997 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
20. SNX19 SNX19 350 0.997 - - 0.997 - - - - - -
21. pycr1 pycr1 1258 0.997 - - 0.997 - - - - - -
22. U1_25 U1_25 283 0.997 - - 0.997 - - - - - -
23. f2rl1.2 ENSDARG00000077540 822 0.997 - - 0.997 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
24. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.996 - - 0.996 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
25. sema3fa ENSDARG00000011163 759 0.996 - - 0.996 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
26. lipt1 ENSDARG00000025233 385 0.996 - - 0.996 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
27. dyrk1ab ENSDARG00000023814 1769 0.996 - - 0.996 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
28. gga3 ENSDARG00000103667 675 0.996 - - 0.996 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
29. si:dkey-176f19.6 si:dkey-176f19.6 373 0.996 - - 0.996 - - - - - -
30. klhl15 ENSDARG00000001930 793 0.996 - - 0.996 - - - - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
31. clybl ENSDARG00000029729 690 0.996 - - 0.996 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
32. nrg1 ENSDARG00000104314 1081 0.996 - - 0.996 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
33. pkib ENSDARG00000053110 527 0.996 - - 0.996 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
34. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.996 - - 0.996 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
35. PPP1R16B ENSDARG00000079860 390 0.996 - - 0.996 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
36. MED8 ENSDARG00000114425 459 0.996 - - 0.996 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
37. fut8 fut8 652 0.996 - - 0.996 - - - - - -
38. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.995 - - 0.995 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
39. lgi1a ENSDARG00000020493 1218 0.995 - - 0.995 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
40. hemk1 ENSDARG00000078894 397 0.995 - - 0.995 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
41. smad4 smad4 2519 0.995 - - 0.995 - - - - - -
42. PATZ1 ENSDARG00000076584 1116 0.994 - - 0.994 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
43. pou6f1 ENSDARG00000011570 1501 0.994 - - 0.994 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
44. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.994 - - 0.994 - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
45. slain2 ENSDARG00000032114 798 0.994 - - 0.994 - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
46. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.994 - - 0.994 - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
47. cln6a ENSDARG00000077584 1090 0.994 - - 0.994 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
48. phf12a ENSDARG00000074303 1025 0.994 - - 0.994 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
49. pank1b ENSDARG00000010098 3202 0.994 - - 0.994 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
50. usp8 ENSDARG00000063719 643 0.994 - - 0.994 - - - - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
51. fignl1 ENSDARG00000016427 636 0.993 - - 0.993 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
52. gins4 ENSDARG00000016044 671 0.993 - - 0.993 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
53. pnn ENSDARG00000015851 1269 0.993 - - 0.993 - - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
54. qki2 ENSDARG00000010018 2230 0.993 - - 0.993 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
55. mrpl22 ENSDARG00000109961 1374 0.993 - - 0.993 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
56. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.993 - - 0.993 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
57. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.993 - - 0.993 - - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
58. setdb1a ENSDARG00000041243 1952 0.993 - - 0.993 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
59. gbas gbas 735 0.992 - - 0.992 - - - - - -
60. PGBD4_3 PGBD4_3 861 0.992 - - 0.992 - - - - - -
61. tmem248 ENSDARG00000018825 1560 0.992 - - 0.992 - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
62. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.992 - - 0.992 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
63. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.992 - - 0.992 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
64. selt1b 1396 0.992 - - 0.992 - - - - - - selenoprotein T, 1b
65. rhogc ENSDARG00000028401 2671 0.992 - - 0.992 - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
66. znf410 ENSDARG00000008218 1807 0.991 - - 0.991 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
67. wdhd1 ENSDARG00000015998 775 0.991 - - 0.991 - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
68. smg5 ENSDARG00000041481 1286 0.99 - - 0.990 - - - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
69. wu:fc26g07 wu:fc26g07 1165 0.99 - - 0.990 - - - - - -
70. NAIF1_1 NAIF1_1 1336 0.99 - - 0.990 - - - - - -
71. actr10 ENSDARG00000038432 1598 0.99 - - 0.990 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
72. mettl3 ENSDARG00000012827 728 0.99 - - 0.990 - - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
73. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.989 - - 0.989 - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
74. phc2b_1 ENSDARG00000013224 1316 0.989 - - 0.989 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
75. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.989 - - 0.989 - - - - - - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
76. si:ch211-114l13.11 si:ch211-114l13.11 4727 0.989 - - 0.989 - - - - - -
77. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.989 - - 0.989 - - - - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
78. olig2 ENSDARG00000040946 1405 0.989 - - 0.989 - - - - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
79. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.989 - - 0.989 - - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
80. eif4e3 ENSDARG00000005078 1624 0.988 - - 0.988 - - - - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
81. CT573103.1 ENSDARG00000097550 950 0.988 - - 0.988 - - - - - -
82. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 0.987 - - 0.987 - - - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
83. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 0.987 - - 0.987 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
84. nploc4 ENSDARG00000100487 1262 0.987 - - 0.987 - - - - - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
85. si:ch211-238e22.1 si:ch211-238e22.1 1032 0.986 - - 0.986 - - - - - -
86. hmgcrb ENSDARG00000105206 2080 0.986 - - 0.986 - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
87. TMEM261 TMEM261 6529 0.986 - - 0.986 - - - - - -
88. arid1b ENSDARG00000092503 1376 0.986 - - 0.986 - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
89. gpatch1 ENSDARG00000033418 1349 0.985 - - 0.985 - - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
90. dtl ENSDARG00000023002 572 0.985 - - 0.985 - - - - - - denticleless E3 ubiquitin protein ligase homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020419-34]
91. crb2a ENSDARG00000060106 1307 0.985 - - 0.985 - - - - - - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
92. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 0.985 - - 0.985 - - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
93. eva1ba ENSDARG00000102701 1480 0.984 - - 0.984 - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
94. flot2a ENSDARG00000004830 5276 0.984 - - 0.984 - - - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
95. rela ENSDARG00000098696 889 0.984 - - 0.984 - - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
96. paxip1 ENSDARG00000005606 1417 0.983 - - 0.983 - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
97. C16H1orf172 C16H1orf172 909 0.983 - - 0.983 - - - - - -
98. si:ch211-125e6.8 ENSDARG00000094518 538 0.982 - - 0.982 - - - - - - si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]
99. fkbp8 ENSDARG00000001734 1709 0.982 - - 0.982 - - - - - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
100. pnkp ENSDARG00000100455, ENSDARG00000114060 1475 0.982 - - 0.982 - - - - - - polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]

There are 789 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA