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Results for CLIP3

Gene Name Gene ID Reads Annotation
CLIP3 ENSDARG00000054456 734 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]










Genes with expression patterns similar to CLIP3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CLIP3 ENSDARG00000054456 734 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
2. st18 663 5.103 - 0.928 - 0.899 - 0.919 0.929 0.709 0.719 suppression of tumorigenicity 18, zinc finger
3. atp1b4 ENSDARG00000053262 1337 4.222 0.741 0.882 - 0.781 - 0.926 0.892 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
4. CABZ01051991.1 CABZ01051991.1 346 4.176 0.814 - - 0.904 - 0.818 0.900 0.740 -
5. adam23a ENSDARG00000062323 580 4.101 0.743 0.846 - 0.906 - 0.710 0.896 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
6. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 4.008 0.739 0.772 - - - 0.894 0.842 0.761 - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
7. amph ENSDARG00000007663 599 3.928 0.797 0.710 - - - 0.816 0.864 0.741 - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
8. add2 ENSDARG00000074581 1402 3.846 0.727 0.712 - - - 0.759 0.928 0.720 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
9. SV2A ENSDARG00000059945 1278 3.803 0.727 - - 0.767 - - 0.801 0.740 0.768 synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
10. BX957337.1 BX957337.1 1685 3.689 0.855 0.988 - - - 0.906 0.940 - -
11. si:ch73-21g5.7 ENSDARG00000093156 9412 3.57 0.886 0.808 - - - 0.941 0.935 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
12. pcsk1nl ENSDARG00000076170 1232 3.568 0.946 0.803 - - - 0.884 0.935 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
13. sox2 ENSDARG00000070913 2763 3.554 0.762 0.922 - - - 0.976 0.894 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
14. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.538 - 0.906 - - - 0.977 0.937 - 0.718 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
15. mir10d-1 mir10d-1 860 3.486 0.862 0.928 - - - 0.829 0.867 - -
16. pcdh1gc5 ENSDARG00000104826 10052 3.476 0.820 0.858 - - - 0.838 0.960 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
17. stmn2a ENSDARG00000033234 2272 3.458 0.846 0.806 - - - 0.911 0.895 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
18. ROBO3_1 ROBO3_1 468 3.453 0.777 0.853 - - - 0.929 0.894 - -
19. C19H7orf41 C19H7orf41 2243 3.412 0.728 - - 0.852 - 0.985 0.847 - -
20. dla ENSDARG00000010791 9281 3.407 0.858 0.876 - - - - 0.935 - 0.738 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
21. myt1b ENSDARG00000102879 5411 3.388 0.833 0.843 - - - 0.774 0.938 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
22. atpv0e2 ENSDARG00000059057 585 3.384 0.833 - - - - 0.968 0.875 0.708 - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
23. dpysl4 ENSDARG00000103490 534 3.378 0.772 - - - - 0.947 0.877 0.782 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
24. cnrip1a ENSDARG00000091683 1491 3.375 0.781 0.702 - - - 0.974 0.918 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
25. bhlhe22 ENSDARG00000058039 1673 3.367 0.906 0.786 - - - - 0.952 0.723 - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
26. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.359 0.847 0.737 - - - 0.907 0.868 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
27. mapk12b ENSDARG00000006409 2246 3.355 - 0.779 - 0.715 - 0.952 0.909 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
28. prrt1 ENSDARG00000062208 368 3.333 0.874 - - - - 0.716 0.957 0.786 - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
29. ttc9b ENSDARG00000068421 251 3.332 0.845 0.808 - - - 0.902 - 0.777 - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
30. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.332 - 0.746 - 0.828 - - 0.951 0.807 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
31. MAP1A MAP1A 847 3.323 0.833 0.808 - - - 0.805 0.877 - -
32. mllt11 ENSDARG00000071026 2518 3.31 0.892 - - - - 0.776 0.932 0.710 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
33. rtn1b ENSDARG00000021143 1682 3.309 0.891 - - 0.729 - 0.831 0.858 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
34. appb ENSDARG00000055543, ENSDARG00000109552 4461 3.303 0.708 - - 0.880 - 0.916 0.799 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
35. her13 ENSDARG00000007097 2000 3.295 - 0.834 - - - - 0.903 0.767 0.791 hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
36. TMEM57 TMEM57 260 3.291 - - - - - 0.965 0.884 0.740 0.702
37. mdkb ENSDARG00000020708 5393 3.29 0.772 - - 0.817 - 0.920 0.781 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
38. tuba1c ENSDARG00000055216 8384 3.288 0.866 - - - - 0.745 0.946 - 0.731 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
39. pax6a ENSDARG00000103379 3061 3.287 0.844 0.821 - - - - 0.839 0.783 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
40. clvs2 ENSDARG00000053122 1390 3.285 0.888 - - 0.709 - - 0.942 0.746 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
41. fez1 ENSDARG00000023174 701 3.282 0.883 - - - - 0.843 0.742 0.814 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
42. tuba2 ENSDARG00000045014 1490 3.272 0.735 - - - - 0.964 0.829 - 0.744 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
43. atp2b3b ENSDARG00000023445 1424 3.271 0.709 0.796 - - - 0.875 0.891 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
44. gpr144 gpr144 479 3.269 0.724 0.747 - - - 0.906 0.892 - -
45. atp1b2a ENSDARG00000099203 4010 3.242 0.833 0.800 - - - - 0.898 - 0.711 ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
46. gap43 ENSDARG00000099744 4114 3.24 0.803 0.707 - - - 0.798 0.932 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
47. slc1a3a ENSDARG00000104431 9888 3.224 0.783 0.723 - - - 0.804 0.914 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
48. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.219 0.891 0.732 - - - - 0.878 0.718 - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
49. atp6v0cb ENSDARG00000036577 3472 3.216 0.799 - - - - 0.743 0.939 - 0.735 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
50. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 3.216 0.720 0.782 - - - 0.838 0.876 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
51. nmnat2 ENSDARG00000004580 370 3.215 0.754 0.753 - - - 0.773 0.935 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
52. SV2B SV2B 208 3.214 0.814 0.710 - - - 0.862 0.828 - -
53. aplp1 ENSDARG00000098368 2317 3.203 0.830 0.701 - - - 0.910 - - 0.762 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
54. ELOVL4 ELOVL4 3026 3.202 0.855 0.763 - - - - 0.804 - 0.780
55. snap25a ENSDARG00000020609 4537 3.201 0.833 0.731 - - - 0.745 0.892 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
56. dpysl5a ENSDARG00000011141 1827 3.192 0.732 - - - - 0.817 0.887 - 0.756 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
57. scrt2 ENSDARG00000056175 4331 3.189 0.809 0.742 - - - 0.813 0.825 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
58. vsnl1a ENSDARG00000023228 1584 3.185 0.717 0.809 - - - 0.864 0.795 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
59. TUSC5 TUSC5 1436 3.175 0.756 0.718 - - - 0.878 0.823 - -
60. elavl4 ENSDARG00000045639 998 3.137 0.753 0.737 - - - - 0.939 - 0.708 ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
61. cadm3 ENSDARG00000057013 1545 3.124 0.722 0.785 - - - 0.783 0.834 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
62. stmn2b ENSDARG00000070537 1586 3.109 0.864 0.728 - - - 0.734 0.783 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
63. hnrnpub ENSDARG00000004735 16496 3.092 0.752 - - - - 0.758 0.854 - 0.728 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
64. tox ENSDARG00000032317 9126 3.068 0.748 - - - - 0.704 0.873 - 0.743 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
65. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.057 0.722 - - - - 0.828 0.807 - 0.700 neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
66. unc13c 197 3.043 0.754 0.784 - - - 0.748 0.757 - - unc-13 homolog C (C. elegans)
67. fam60al 2846 3.027 0.747 - - - - 0.790 0.752 0.738 - family with sequence similarity 60, member A, like
68. celf3a ENSDARG00000034668 2432 2.956 - - - - - 0.752 0.706 0.795 0.703 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
69. her15.2 her15.2 1701 2.868 - 0.937 - - - 0.986 0.945 - -
70. nxph1 ENSDARG00000033447 182 2.815 0.908 - - - - 0.987 0.920 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
71. nadl1.1 1200 2.794 0.969 0.896 - - - - 0.929 - - neural adhesion molecule L1.1, transcript variant X1
72. syt11a ENSDARG00000057913 1145 2.787 0.956 - - - - 0.900 0.931 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
73. st6gal1 ENSDARG00000044514 142 2.729 0.886 - - - - 0.968 0.875 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
74. scn1lab ENSDARG00000062744 155 2.715 - 0.842 - - - 0.949 0.924 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
75. syn2a ENSDARG00000045945 434 2.708 0.841 - - - - 0.972 0.895 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
76. eno2 ENSDARG00000014287 2162 2.693 0.871 - - - - 0.899 0.923 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
77. slc18a3a ENSDARG00000006356 1285 2.688 0.834 0.913 - - - - 0.941 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
78. pknox2 ENSDARG00000055349 784 2.686 - 0.871 - - - 0.933 0.882 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
79. sox19b ENSDARG00000040266 532 2.684 0.903 0.941 - - - - 0.840 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
80. atp6ap1a ENSDARG00000041417 898 2.68 - - - 0.894 - 0.990 0.796 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
81. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.675 0.888 0.856 - - - - 0.931 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
82. adarb1a ENSDARG00000041609 476 2.672 0.793 - - - - 0.982 0.897 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
83. neurog1 ENSDARG00000056130 3924 2.66 0.840 0.903 - - - - 0.917 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
84. C7H4orf48 C7H4orf48 1455 2.657 0.892 - - - - 0.880 0.885 - -
85. plp1a ENSDARG00000103732 3544 2.656 0.827 - - - - 0.908 0.921 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
86. stmn1b ENSDARG00000033655 9491 2.655 0.803 - - - - 0.940 0.912 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
87. sox21b ENSDARG00000008540 1460 2.648 0.820 0.891 - - - - 0.937 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
88. mb21d2a mb21d2a 421 2.643 - 0.895 - 0.897 - - 0.851 - -
89. ppp3ca ENSDARG00000004988 615 2.639 0.858 - - - - 0.920 0.861 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
90. tnika ENSDARG00000056218 728 2.638 - 0.749 - - - 0.988 0.901 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
91. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.637 0.811 - - - - 0.937 0.889 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
92. stxbp1a ENSDARG00000001994 5154 2.629 - 0.849 - - - 0.864 0.916 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
93. C8H1orf106 C8H1orf106 2690 2.627 0.881 - - 0.855 - - 0.891 - -
94. unc119b ENSDARG00000044362 1528 2.619 - - - 0.883 - 0.890 0.846 - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
95. LRRN3 LRRN3 261 2.619 0.874 0.860 - - - - 0.885 - -
96. si:dkey-100n10.2 101 2.602 0.712 - - 0.918 - 0.972 - - - si:dkey-100n10.2
97. dnajc6 ENSDARG00000079891 438 2.601 - - - - - 0.979 0.884 0.738 - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
98. CABZ01111990.1 CABZ01111990.1 4374 2.599 0.850 - - - - - 0.915 0.834 -
99. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.598 - 0.915 - - - 0.821 0.862 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
100. ADAM22 ENSDARG00000060532 2259 2.597 - - - - - 0.954 0.933 0.710 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]

There are 2824 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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