Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CLIC3

Gene Name Gene ID Reads Annotation
CLIC3 ENSGALG00000038789 233 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]











Genes with expression patterns similar to CLIC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CLIC3 ENSGALG00000038789 233 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
2. KCNB1 ENSGALG00000004758 620 1.908 - - - - 0.942 - - - - 0.966 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
3. SPSB3 ENSGALG00000002285 1329 1.745 - - 0.768 - 0.977 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
4. ELOVL1 ENSGALG00000009988 4000 1.734 - - - - 0.861 - - - - 0.873 ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
5. NMB ENSGALG00000043506 1387 1.726 - - - - 0.906 - - - - 0.820 neuromedin B [Source:NCBI gene;Acc:415333]
6. CEP44 ENSGALG00000020201 1060 1.709 - - - - 0.888 - - - - 0.821 centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
7. ZNF385D ENSGALG00000011283 2578 1.689 - - - - 0.875 - - - - 0.814 zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
8. CAMLG ENSGALG00000006411 662 1.687 - - 0.762 - 0.925 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
9. MMP9 ENSGALG00000006992 78 1.678 - - 0.866 - - - - 0.812 - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
10. ROGDI ENSGALG00000001841 313 1.671 - - 0.711 - - - - - - 0.960 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
11. RNF170 ENSGALG00000015386 296 1.627 - - 0.760 - - - - - - 0.867 ring finger protein 170 [Source:NCBI gene;Acc:427296]
12. RICTOR ENSGALG00000003775 247 1.627 - - 0.824 - - 0.803 - - - - RPTOR independent companion of MTOR complex 2 [Source:HGNC Symbol;Acc:HGNC:28611]
13. TTC9 ENSGALG00000017652 16 1.584 - - - - - - 0.804 0.780 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
14. NID1 ENSGALG00000042079 89 1.527 - - - - - - - 0.825 - 0.702 nidogen 1 [Source:HGNC Symbol;Acc:HGNC:7821]
15. UBE3C ENSGALG00000006461 57 1.525 - - 0.766 - - 0.759 - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
16. FRRS1 ENSGALG00000005418 332 1.523 - - - - - 0.788 - 0.735 - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
17. TNN ENSGALG00000004538 21 0.998 - - - - - - - - - 0.998 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
18. TNFAIP3 ENSGALG00000013861 11 0.991 - - - - - - - - - 0.991 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
19. gga-mir-6544 ENSGALG00000027916 19 0.991 - - - - - - - - - 0.991 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
20. NMBR ENSGALG00000013813 15 0.99 - - - - - - - - - 0.990 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
21. C3orf58 ENSGALG00000002347 27 0.99 - - - - - - - - - 0.990 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
22. BOK ENSGALG00000005772 117 0.989 - - - - - - - - - 0.989 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
23. TMEM200B ENSGALG00000024318 117 0.989 - - - - - - - - - 0.989 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
24. TRAK2 ENSGALG00000008370 46 0.987 - - - - - - - - - 0.987 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
25. PAQR8 ENSGALG00000016675 85 0.987 - - - - 0.987 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
26. STON2 ENSGALG00000010579 76 0.986 - - - - 0.986 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
27. KAT6B ENSGALG00000005035 301 0.985 - - - - - - - - - 0.985 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
28. AKAP11 ENSGALG00000022739 82 0.984 - - - - - - - - - 0.984 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
29. ZMYND10 ENSGALG00000035883 58 0.983 - - - - - - - - - 0.983 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
30. CCDC6 ENSGALG00000003165 93 0.982 - - - - 0.982 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
31. TRMT61A ENSGALG00000011522 14 0.982 - - - - - - - - - 0.982 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
32. TBX5 ENSGALG00000008253 820 0.981 - - - - - - - - - 0.981 T-box 5 [Source:NCBI gene;Acc:373988]
33. ASTE1 ENSGALG00000036171 155 0.98 - - - - 0.980 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
34. SLC7A2 ENSGALG00000013627 58 0.979 - - - - - - - - - 0.979 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
35. CECR1 336 0.979 - - - - 0.979 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
36. INADL INADL 51 0.976 - - - - - - - - - 0.976
37. PHF11 ENSGALG00000019094 770 0.976 - - - - - - - - - 0.976 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
38. SULT2B1L1 ENSGALG00000023472 569 0.976 - - - - - - - 0.976 - - sulfotransferase family cytosolic 2B member 1-like 1
39. TNFAIP2 ENSGALG00000011446 32 0.975 - - - - - - - - - 0.975 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
40. ZEB2 ENSGALG00000040465 315 0.974 - - - - - - - - - 0.974 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
41. CMTM3 ENSGALG00000000424 393 0.974 - - - - 0.974 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
42. KCNC4 ENSGALG00000000400 129 0.974 - - - - 0.974 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
43. PKD2 ENSGALG00000010921 55 0.973 - - - - - - - - - 0.973 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
44. ING5 ENSGALG00000006317 149 0.973 - - - - - - - - - 0.973 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
45. SENP7 ENSGALG00000044642 48 0.972 - - - - - - - - - 0.972 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
46. KLC4 ENSGALG00000030384 154 0.972 - - - - - - 0.972 - - - kinesin light chain 4, transcript variant X5
47. CSPP1 1756 0.971 - - - - 0.971 - - - - - centrosome and spindle pole associated protein 1
48. FAM154B FAM154B 175 0.969 - - - - - - - - - 0.969
49. SLC20A1 ENSGALG00000013740 40 0.969 - - - - - - - - - 0.969 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
50. SRSF4 1200 0.969 - - - - 0.969 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
51. FAM171B ENSGALG00000002646 837 0.968 - - - - 0.968 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
52. SMEK1 SMEK1 95 0.964 - - - - - - - - - 0.964
53. GSS ENSGALG00000003281 57 0.964 - - - - - - - - - 0.964 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
54. TRAF-5 TRAF-5 102 0.963 - - - - - - - - - 0.963
55. PPTC7 ENSGALG00000004550 154 0.962 - - - - 0.962 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
56. ERRFI1 ENSGALG00000000535 83 0.961 - - - - - - - - - 0.961 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
57. BMP2K ENSGALG00000010885 37 0.96 - - - - - - - - - 0.960 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
58. PDE3A ENSGALG00000013143 28 0.96 - - - - - - - - - 0.960 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
59. MOCS3 ENSGALG00000007986 308 0.958 - - - - 0.958 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
60. ZNF385B ENSGALG00000009012 290 0.958 - - - - - - - - - 0.958 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
61. OSBPL2 ENSGALG00000005195 94 0.958 - - - - - - - - - 0.958 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
62. PXK ENSGALG00000007052 121 0.957 - - - - - - - - - 0.957 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
63. BBX ENSGALG00000015353 1281 0.957 - - - - 0.957 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
64. LMBR1 ENSGALG00000030379 29 0.957 - - - - - - - - - 0.957 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
65. TM6SF1 ENSGALG00000006027 20 0.955 - - - - - - - - - 0.955 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
66. CANT1 ENSGALG00000011822 2218 0.954 - - - - 0.954 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
67. GGA.10540 GGA.10540 3324 0.953 - - - - 0.953 - - - - -
68. DUS2 856 0.952 - - - - 0.952 - - - - - dihydrouridine synthase 2, transcript variant X2
69. ABCD2 ENSGALG00000042554 1607 0.95 - - - - 0.950 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
70. TGFBRAP1 ENSGALG00000016795 81 0.949 - - - - - - - - - 0.949 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
71. ENSGALG00000022967 ENSGALG00000022967 240 0.948 - - - - 0.948 - - - - -
72. SLC30A9 ENSGALG00000031415 36 0.947 - - - - - - - - - 0.947 solute carrier family 30 member 9
73. KIF24 ENSGALG00000005806 124 0.945 - - - - - - - - - 0.945 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
74. TEF ENSGALG00000011958 375 0.945 - - - - 0.945 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
75. DPP7 ENSGALG00000038145 4888 0.945 - - - - 0.945 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
76. SMOC2 ENSGALG00000011205 340 0.945 - - - - - - - - - 0.945 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
77. SCAF4 ENSGALG00000033965 2027 0.945 - - - - 0.945 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
78. MYCN ENSGALG00000016462 1930 0.945 - - - - - - - - - 0.945 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
79. MYH11 ENSGALG00000006520 166 0.944 - - - - - - - - - 0.944 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
80. B3GAT2 ENSGALG00000031590 615 0.944 - - - - 0.944 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
81. TAC1 ENSGALG00000009737 2211 0.944 - - - - 0.944 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
82. GPR158 ENSGALG00000007667 111 0.942 - - - - 0.942 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
83. ENSGALG00000006865 ENSGALG00000006865 307 0.941 - - - - 0.941 - - - - -
84. SRR ENSGALG00000003155 93 0.941 - - - - - - - - - 0.941 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
85. ITM2B ENSGALG00000016996 1112 0.941 - - - - - - - - - 0.941 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
86. SERAC1 ENSGALG00000013732 24 0.94 - - - - - - - - - 0.940 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
87. CREB5 ENSGALG00000038265 92 0.94 - - - - - - - - - 0.940 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
88. PLEKHB1 ENSGALG00000017321 443 0.938 - - - - 0.938 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
89. NME6 ENSGALG00000038044 1231 0.938 - - - - - - - - - 0.938 NME/NM23 nucleoside diphosphate kinase 6
90. SRRD ENSGALG00000005614 234 0.937 - - - - - - - - - 0.937 SRR1 domain containing [Source:NCBI gene;Acc:416908]
91. CADM3 ENSGALG00000036925 1753 0.934 - - - - 0.934 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
92. ATF2 ENSGALG00000009287 73 0.934 - - - - - - - - - 0.934 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
93. GKAP1 ENSGALG00000012586 2908 0.932 - - - - 0.932 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
94. GLT8D1 ENSGALG00000001642 4232 0.931 - - - - 0.931 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
95. GRIK2 ENSGALG00000015434 5 0.931 - - - - - - - 0.931 - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
96. ENSGALG00000026897 ENSGALG00000026897 6 0.931 - - - - - - - 0.931 - -
97. FAM183A 242 0.93 - - - - 0.930 - - - - - family with sequence similarity 183 member A, transcript variant 2
98. HS1BP3 ENSGALG00000016486 380 0.93 - - - - - - - - - 0.930 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
99. C1orf50 ENSGALG00000004800 4894 0.93 - - - - 0.930 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
100. GALNT16 ENSGALG00000009452 675 0.929 - - - - 0.929 - - - - - polypeptide N-acetylgalactosaminyltransferase 16 [Source:HGNC Symbol;Acc:HGNC:23233]

There are 578 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA