Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CLDN1

Gene Name Gene ID Reads Annotation
CLDN1 ENSGALG00000026862 28 claudin 1 [Source:NCBI gene;Acc:424910]











Genes with expression patterns similar to CLDN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CLDN1 ENSGALG00000026862 28 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 claudin 1 [Source:NCBI gene;Acc:424910]
2. PCID2 ENSGALG00000016831 57 1.905 - - - - - 0.905 1.000 - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
3. VIT ENSGALG00000010583 16 1.762 - - - - 1.000 - - - - 0.762 vitrin [Source:NCBI gene;Acc:421471]
4. HINFP ENSGALG00000006806 15 1.705 - - - - - 0.943 - - - 0.762 histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
5. CCDC148 ENSGALG00000012555 22 1.703 - - - - - - 1.000 - - 0.703 coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
6. CYP2H1 CYP2H1 363 1.661 - - 0.718 - - 0.943 - - - -
7. SLCO2A1 ENSGALG00000006471 18 1.437 - - 0.729 - 0.708 - - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
8. PET112 PET112 38 1 - - - - 1.000 - - - - -
9. FTO ENSGALG00000041036 11 1 - - - - 1.000 - - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
10. CD72 ENSGALG00000005194 1 1 - - - - - - 1.000 - - - CD72 molecule [Source:NCBI gene;Acc:395923]
11. ENSGALG00000028038 ENSGALG00000028038 9 1 - - - - - - 1.000 - - -
12. CEP85 ENSGALG00000042624 59 1 - - - - - - 1.000 - - - centrosomal protein 85 [Source:HGNC Symbol;Acc:HGNC:25309]
13. DMP1 ENSGALG00000010927 5 1 - - - - - - 1.000 - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
14. VSNL1 ENSGALG00000016464 19 1 - - - - - - 1.000 - - - visinin like 1 [Source:NCBI gene;Acc:396189]
15. SRD5A2 ENSGALG00000010625 23 1 - - - - - - 1.000 - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
16. MPPED2 ENSGALG00000012136 7 1 - - - - - - 1.000 - - - metallophosphoesterase domain containing 2 [Source:NCBI gene;Acc:421604]
17. C3orf58 ENSGALG00000002347 27 1 - - - - 1.000 - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
18. TGIF2 ENSGALG00000024081 21 1 - - - - - - 1.000 - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
19. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 1 - - - - - - 1.000 - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
20. CTNND1 ENSGALG00000007330 53 1 - - - - - - 1.000 - - - catenin delta 1 [Source:HGNC Symbol;Acc:HGNC:2515]
21. TEX33 ENSGALG00000012490 11 1 - - - - 1.000 - - - - - testis expressed 33, transcript variant X2
22. C21orf62 ENSGALG00000040059 5 1 - - - - - - 1.000 - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
23. ENSGALG00000000346 ENSGALG00000000346 130 1 - - - - - - 1.000 - - -
24. ZDHHC18 ENSGALG00000034910 16 1 - - - - - - 1.000 - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
25. SBSPONL ENSGALG00000005862 129 1 - - - - - - 1.000 - - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
26. VSX2 ENSGALG00000033517 30 1 - - - - - - 1.000 - - - visual system homeobox 2 [Source:NCBI gene;Acc:395536]
27. TM6SF2 ENSGALG00000029015 109 1 - - - - - - 1.000 - - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
28. RGR ENSGALG00000002299 17 1 - - - - - - 1.000 - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
29. ENSGALG00000019156 ENSGALG00000019156 1 1 - - - - - - 1.000 - - -
30. CYP17A1 ENSGALG00000008121 227 1 - - - - - - 1.000 - - - cytochrome P450 family 17 subfamily A member 1 [Source:NCBI gene;Acc:425056]
31. CACNG3 ENSGALG00000038087 12 1 - - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
32. ENSGALG00000001478 ENSGALG00000001478 23 1 - - - - - - 1.000 - - -
33. BRPF3 8 1 - - - - - - 1.000 - - - bromodomain and PHD finger containing, 3, transcript variant X2
34. GLYCTK ENSGALG00000004018 5 1 - - - - 1.000 - - - - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
35. TAT ENSGALG00000000893 11 1 - - - - - - 1.000 - - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
36. CTNNAL1 ENSGALG00000013207 44 1 - - - - - - 1.000 - - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
37. PACSIN1 ENSGALG00000002802 6 1 - - - - - - 1.000 - - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
38. GPR103 GPR103 18 1 - - - - 1.000 - - - - -
39. PIK3CG ENSGALG00000008081 5 1 - - - - - - 1.000 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
40. TMCC1 ENSGALG00000008487 65 1 - - - - - - 1.000 - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
41. PLCL1 ENSGALG00000008113 23 1 - - - - - - 1.000 - - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
42. U4atac U4atac 23 1 - - - - 1.000 - - - - -
43. MATN3 ENSGALG00000016478 10 1 - - - - - - 1.000 - - - matrilin 3 [Source:NCBI gene;Acc:395954]
44. MCMBP ENSGALG00000009455 90 1 - - - - - - 1.000 - - - minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
45. SMTNL1 12 1 - - - - - - 1.000 - - - smoothelin like 1
46. ENSGALG00000019221 ENSGALG00000019221 9 1 - - - - - - 1.000 - - -
47. SELP 28 1 - - - - - - 1.000 - - - selectin P, transcript variant X9
48. VEPH1 ENSGALG00000009682 51 1 - - - - - - 1.000 - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
49. MSL2 ENSGALG00000039294 55 1 - - - - - - 1.000 - - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
50. CUBN ENSGALG00000008704 21 1 - - - - - - 1.000 - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
51. gga-mir-6558 ENSGALG00000032123 13 1 - - - - - - 1.000 - - - gga-mir-6558 [Source:miRBase;Acc:MI0022376]
52. SYPL1 ENSGALG00000029006 126 1 - - - - - - 1.000 - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
53. CFAP74 ENSGALG00000001288 54 1 - - - - - - 1.000 - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
54. FAM240B ENSGALG00000021163 6 1 - - - - - - 1.000 - - - family with sequence similarity 240 member B [Source:NCBI gene;Acc:427470]
55. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - 1.000 - - -
56. WNT3 ENSGALG00000001079 8 0.997 - - - - 0.997 - - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
57. DAZL ENSGALG00000011243 34 0.987 - - - - 0.987 - - - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
58. ENSGALG00000028652 ENSGALG00000028652 65 0.979 - - - - 0.979 - - - - -
59. PLXNC1 ENSGALG00000011309 69 0.968 - - - - 0.968 - - - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
60. ZP2 ENSGALG00000002428 10 0.966 - - - - 0.966 - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
61. FRRS1 ENSGALG00000005418 332 0.953 - - - - - 0.953 - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
62. NIPAL4 ENSGALG00000039687 29 0.951 - - - - 0.951 - - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
63. ANGPTL3 ENSGALG00000010978 335 0.943 - - - - - 0.943 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
64. SERPINA12 SERPINA12 3 0.943 - - - - - 0.943 - - - -
65. GLOD5 ENSGALG00000025991 17 0.943 - - - - - 0.943 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
66. GPR88 ENSGALG00000005252 4 0.943 - - - - - 0.943 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
67. ENSGALG00000028413 ENSGALG00000028413 551 0.943 - - - - - 0.943 - - - -
68. HMGCS2 ENSGALG00000002960 54 0.942 - - - - - 0.942 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
69. TRPM6 3 0.941 - - - 0.941 - - - - - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
70. CHRNA3 ENSGALG00000003014 6 0.941 - - - 0.941 - - - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
71. LRRN2 ENSGALG00000000639 73 0.941 - - - 0.941 - - - - - - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
72. FAM198A ENSGALG00000037533 7 0.941 - - - 0.941 - - - - - - family with sequence similarity 198 member A [Source:HGNC Symbol;Acc:HGNC:24485]
73. NFKB2 ENSGALG00000005653 39 0.941 - - - 0.941 - - - - - - nuclear factor kappa B subunit 2 [Source:NCBI gene;Acc:386574]
74. ENSGALG00000029149 ENSGALG00000029149 7 0.941 - - - - - 0.941 - - - -
75. ENSGALG00000000307 ENSGALG00000000307 29 0.941 - - - 0.941 - - - - - -
76. PTCHD3 ENSGALG00000023347 5 0.941 - - - 0.941 - - - - - - patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
77. HTR1A ENSGALG00000014742 2 0.941 - - - 0.941 - - - - - - 5-hydroxytryptamine receptor 1A [Source:NCBI gene;Acc:431581]
78. C3H6ORF138 C3H6ORF138 2 0.941 - - - 0.941 - - - - - -
79. SNORA62 SNORA62 11 0.941 - - - 0.941 - - - - - -
80. RPL3L ENSGALG00000005458 9 0.941 - - - - - 0.941 - - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
81. ARMC3 ENSGALG00000007864 6 0.941 - - - 0.941 - - - - - - armadillo repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:30964]
82. DDX43 ENSGALG00000015928 6 0.941 - - - 0.941 - - - - - - DEAD-box helicase 43
83. MBLAC2 ENSGALG00000014649 16 0.941 - - - 0.941 - - - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
84. DOLK ENSGALG00000026007 6 0.941 - - - 0.941 - - - - - - dolichol kinase [Source:NCBI gene;Acc:417199]
85. CKV6.3 CKV6.3 13 0.941 - - - 0.941 - - - - - -
86. RREB1 ENSGALG00000012799 125 0.937 - - - - 0.937 - - - - - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
87. PALM2 ENSGALG00000015655 20 0.937 - - - - - 0.937 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
88. GPR85 ENSGALG00000009439 23 0.934 - - - - 0.934 - - - - - G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
89. TIMD4 ENSGALG00000003876 61 0.932 - - - - 0.932 - - - - - T-cell immunoglobulin and mucin domain containing 4 [Source:NCBI gene;Acc:416250]
90. SCNN1B ENSGALG00000006202 87 0.931 - - - - - - 0.931 - - - sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
91. P2RY1 ENSGALG00000010357 11 0.931 - - - - - 0.931 - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
92. CPA6 ENSGALG00000041918 54 0.929 - - - - - 0.929 - - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
93. CRYBA2 ENSGALG00000011354 14 0.923 - - - - - 0.923 - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
94. TTLL7 ENSGALG00000008850 49 0.923 - - - - - 0.923 - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
95. RAD54L2 ENSGALG00000003243 187 0.922 - - - - - 0.922 - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
96. ENSGALG00000019430 ENSGALG00000019430 32 0.919 - - - - 0.919 - - - - -
97. CARD8 ENSGALG00000007698 45 0.918 - - - - - - 0.918 - - - caspase recruitment domain family, member 8
98. UBE3C ENSGALG00000006461 57 0.917 - - - - - 0.917 - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
99. gga-mir-6703 ENSGALG00000029026 124 0.917 - - - - - 0.917 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
100. EVC2 ENSGALG00000015029 51 0.916 - - - - 0.916 - - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]

There are 225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA