Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CKAP4

Gene Name Gene ID Reads Annotation
CKAP4 ENSGALG00000012659 36398 cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]











Genes with expression patterns similar to CKAP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CKAP4 ENSGALG00000012659 36398 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
2. ACTR6 ENSGALG00000040976 31271 1.763 - - - - - - 0.822 0.941 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
3. C9orf89 C9orf89 3056 1.646 - - - - - - - 0.870 - 0.776
4. CWC22 ENSGALG00000009001 5984 1.63 - - - - - - - 0.886 - 0.744 CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
5. HSPA12A ENSGALG00000009248 7783 1.617 - - - - - - - 0.859 - 0.758 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
6. MYBL2 ENSGALG00000003503 15875 1.616 - - - - - - 0.808 0.808 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
7. ABRACL ENSGALG00000013826 19445 1.592 - - - - - - 0.850 - - 0.742 ABRA C-terminal like [Source:NCBI gene;Acc:770205]
8. UPF2 ENSGALG00000033772 9548 1.587 - - - - - - - - 0.803 0.784 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
9. SPATA20 ENSGALG00000006857 3506 1.582 - - - - - - - 0.812 - 0.770 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
10. ST13 ENSGALG00000012007 25670 0.968 - - - - - - 0.968 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
11. SEC61G ENSGALG00000037863 83362 0.941 - - - - - - 0.941 - - - Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
12. BRIX1 ENSGALG00000003373 27878 0.936 - - - - - - 0.936 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
13. UBE2N ENSGALG00000030515 32059 0.935 - - - - - - 0.935 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
14. HDLBP ENSGALG00000005823 24636 0.932 - - - - - - 0.932 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
15. WDFY3 10775 0.927 - - - - - - - 0.927 - - WD repeat and FYVE domain containing 3, transcript variant X7
16. HNRNPU ENSGALG00000010671 56560 0.927 - - - - - - 0.927 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
17. LAPTM4A ENSGALG00000016479 15973 0.925 - - - - - - - 0.925 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
18. RPL7L1 ENSGALG00000011974 20292 0.917 - - - - - - - 0.917 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
19. PDCD6 ENSGALG00000013400 7611 0.908 - - - - - - - 0.908 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
20. MGST1 ENSGALG00000013098 17632 0.904 - - - - - - - 0.904 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
21. ENSGALG00000000360 ENSGALG00000000360 15320 0.903 - - - - - - 0.903 - - -
22. TBL1X ENSGALG00000040006 28597 0.899 - - - - - - 0.899 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
23. NDUFA11 ENSGALG00000021692 75804 0.898 - - - - - - 0.898 - - - NADH:ubiquinone oxidoreductase subunit A11
24. FAT1 ENSGALG00000013579 6030 0.897 - - - - - - - 0.897 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
25. PRDX1 ENSGALG00000010243 151918 0.895 - - - - - - 0.895 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
26. ARGLU1 ENSGALG00000016855 25633 0.894 - - - - - - 0.894 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
27. INTS2 ENSGALG00000005269 6966 0.892 - - - - - - - 0.892 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
28. RPS25 ENSGALG00000007699 156127 0.89 - - - - - - 0.890 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
29. PTK7 ENSGALG00000008609 8081 0.889 - - - - - - - 0.889 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
30. LMO7 ENSGALG00000016920 3809 0.889 - - - - - - - 0.889 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
31. KLHDC2 ENSGALG00000012244 12903 0.888 - - - - - - - 0.888 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
32. PELI1 ENSGALG00000008837 11561 0.888 - - - - - - 0.888 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
33. ADAR ENSGALG00000021475 6004 0.885 - - - - - - - 0.885 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
34. PPAT ENSGALG00000013728 7563 0.884 - - - - - - - 0.884 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
35. VPS36 ENSGALG00000017026 3658 0.883 - - - - - - - 0.883 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
36. PHAX ENSGALG00000014691 8114 0.883 - - - - - - - 0.883 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
37. LAMTOR2 ENSGALG00000029881 35356 0.882 - - - - - - - 0.882 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
38. ZNF462 ENSGALG00000015451 12653 0.88 - - - - - - - 0.880 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
39. SLC52A3 ENSGALG00000006194 3952 0.879 - - - - - - - 0.879 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
40. SLBP ENSGALG00000015712 5586 0.879 - - - - - - - 0.879 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
41. RPL29 ENSGALG00000026978 271790 0.879 - - - - - - 0.879 - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
42. GLO1 ENSGALG00000010127 31662 0.878 - - - - - - - 0.878 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
43. CTU2 4818 0.877 - - - - - - - 0.877 - - cytosolic thiouridylase subunit 2, transcript variant X3
44. CCT5 ENSGALG00000013041 56190 0.875 - - - - - - 0.875 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
45. MAN1A2 451 0.873 - - - - - - - - - 0.873 mannosidase alpha class 1A member 2
46. BMP4 ENSGALG00000012429 4306 0.873 - - - - - - - 0.873 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
47. RRBP1 ENSGALG00000008676 5376 0.873 - - - - - - - 0.873 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
48. VEGFC ENSGALG00000010847 2197 0.871 - - - - - - - 0.871 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
49. TNFRSF21 ENSGALG00000016719 2762 0.871 - - - - - - - 0.871 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
50. CREB1 ENSGALG00000008494 2219 0.87 - - - - - - - 0.870 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
51. MAP4K3 ENSGALG00000039720 5124 0.869 - - - - - - - 0.869 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
52. USP24 ENSGALG00000010805 576 0.869 - - - - - - - - - 0.869 ubiquitin specific peptidase 24 [Source:HGNC Symbol;Acc:HGNC:12623]
53. NAP1L1 ENSGALG00000010238 14506 0.869 - - - - - - - - - 0.869 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
54. USP30 ENSGALG00000040265 2000 0.868 - - - - - - - 0.868 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
55. GPX8 ENSGALG00000026704 4497 0.868 - - - - - - - - - 0.868 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
56. COL5A2 ENSGALG00000031112 18358 0.868 - - - - - - - - - 0.868 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
57. ZDHHC6 ENSGALG00000008870 16575 0.868 - - - - - - 0.868 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
58. SIN3A ENSGALG00000001644 1141 0.868 - - - - - - - 0.868 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
59. SNRPB2 28675 0.866 - - - - - - 0.866 - - - small nuclear ribonucleoprotein polypeptide B2
60. PRRX2 ENSGALG00000028236 1990 0.865 - - - - - - - 0.865 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
61. USP42 ENSGALG00000003378 1392 0.865 - - - - - - - 0.865 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
62. RPF1 ENSGALG00000008796 9809 0.864 - - - - - - 0.864 - - - ribosome production factor 1 homolog
63. STAMBP ENSGALG00000042555 1362 0.864 - - - - - - - 0.864 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
64. GNA12 ENSGALG00000004368 692 0.864 - - - - - - - 0.864 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
65. PDCL3 ENSGALG00000016772 14897 0.864 - - - - - - - 0.864 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
66. TLL1 ENSGALG00000009567 1821 0.864 - - - - - - - - - 0.864 tolloid like 1 [Source:NCBI gene;Acc:395441]
67. CETN1 ENSGALG00000026741 7243 0.864 - - - - - - - - - 0.864 centrin 1 [Source:NCBI gene;Acc:422668]
68. GYG1 ENSGALG00000035535 6311 0.863 - - - - - - - 0.863 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
69. TMEM69 ENSGALG00000010279 716 0.862 - - - - - - - 0.862 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
70. BUB3 ENSGALG00000009681 36055 0.862 - - - - - - 0.862 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
71. ENSGALG00000028413 ENSGALG00000028413 551 0.862 - - - - - - - 0.862 - -
72. TDRD1 ENSGALG00000046180 612 0.862 - - - - - - - 0.862 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
73. THRAP3 ENSGALG00000002144 21958 0.862 - - - - - - - 0.862 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
74. PDE3B ENSGALG00000006035 3732 0.862 - - - - - - - - - 0.862 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
75. CP ENSGALG00000030773 119 0.861 - - - - - - - - - 0.861 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
76. MRPS26 ENSGALG00000014118 27422 0.86 - - - - - - 0.860 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
77. RSPO2 ENSGALG00000030030 1271 0.858 - - - - - - - - - 0.858 R-spondin 2 [Source:NCBI gene;Acc:420271]
78. CSNK2A1 ENSGALG00000006197 41409 0.855 - - - - - - - 0.855 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
79. N4BP2 ENSGALG00000014281 3144 0.855 - - - - - - - - - 0.855 NEDD4 binding protein 2, transcript variant X6
80. RPL22 ENSGALG00000000719 74238 0.854 - - - - - - - - - 0.854 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
81. ALMS1 ENSGALG00000044620 570 0.853 - - - - - - - - - 0.853 ALMS1, centrosome and basal body associated protein, transcript variant X1
82. TRA2A ENSGALG00000010973 37101 0.853 - - - - - - 0.853 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
83. CLSPN ENSGALG00000002346 2590 0.851 - - - - - - - - - 0.851 claspin [Source:NCBI gene;Acc:428223]
84. CDC5L ENSGALG00000016704 22893 0.85 - - - - - - 0.850 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
85. ENSGALG00000013825 ENSGALG00000013825 16473 0.85 - - - - - - 0.850 - - -
86. 5 5 4209 0.85 - - - - - - - - - 0.850
87. FARP1 ENSGALG00000016886 13132 0.849 - - - - - - - 0.849 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
88. STRADA ENSGALG00000000550 6912 0.848 - - - - - - - - - 0.848 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
89. SLK ENSGALG00000008318 2220 0.848 - - - - - - - - - 0.848 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
90. MOB4 ENSGALG00000008128 10322 0.848 - - - - - - 0.848 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
91. SVIL ENSGALG00000007331 12032 0.848 - - - - - - - - - 0.848 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
92. PRDM4 ENSGALG00000012619 876 0.847 - - - - - - - - - 0.847 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
93. HOTAIRM1 HOTAIRM1 4335 0.846 - - - - - - - - - 0.846
94. QKI ENSGALG00000011555 1275 0.844 - - - - - - - - - 0.844 QKI, KH domain containing RNA binding [Source:NCBI gene;Acc:374204]
95. PLA2G15 ENSGALG00000041787 762 0.843 - - - - - - - - - 0.843 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
96. TXNDC11 ENSGALG00000003154 2224 0.843 - - - - - - - - - 0.843 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
97. MAN2A1 ENSGALG00000000255 4543 0.843 - - - - - - - - - 0.843 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
98. RHOT1 ENSGALG00000003397 5149 0.841 - - - - - - - - - 0.841 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
99. PDPN ENSGALG00000030096 647 0.84 - - - - - - - - - 0.840 podoplanin, transcript variant X4
100. APBA3 ENSGALG00000000740 1249 0.84 - - - - - - - - - 0.840 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]

There are 439 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA