Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CIT_1

Gene Name Gene ID Reads Annotation
CIT_1 CIT_1 6










Genes with expression patterns similar to CIT_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CIT_1 CIT_1 6 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. PPAPDC3 PPAPDC3 14 2.817 - - - 0.952 0.865 1.000 - - -
3. FBXL21 FBXL21 6 2.779 1.000 1.000 - - 0.779 - - - -
4. nr4a2a ENSDARG00000017007 140 2.486 - 0.714 - - 0.772 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
5. C6H22orf23 C6H22orf23 15 2 1.000 - - - - - 1.000 - -
6. zgc:113516 20 2 - 1.000 - - - 1.000 - - - zgc:113516
7. BX640518.1 BX640518.1 24 2 - 1.000 - - - 1.000 - - -
8. si:dkey-258f14.3 ENSDARG00000075974 9 2 1.000 - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
9. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 2 - - - - - 1.000 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
10. ifitm5 ENSDARG00000105153 132 2 1.000 1.000 - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
11. CU468142.1 CU468142.1 6 2 - - - - - 1.000 1.000 - -
12. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 2 1.000 1.000 - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
13. MYO9B ENSDARG00000078313 97 2 - - - - - 1.000 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
14. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 2 - - - - - 1.000 1.000 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
15. xrra1 ENSDARG00000089578 18 2 1.000 - - - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
16. CABZ01015475.1 ENSDARG00000104841 6 2 - - - - - 1.000 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
17. CU457819.2 ENSDARG00000105374 8 2 - 1.000 - - 1.000 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
18. CNTNAP3 ENSDARG00000067824 25 2 - 1.000 - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
19. PSTPIP2 ENSDARG00000089569 1 2 - 1.000 - - 1.000 - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
20. pole2 ENSDARG00000100028 42 2 - 1.000 - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
21. hs6st3b ENSDARG00000069500 5 2 - 1.000 - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
22. mettl8 ENSDARG00000017359 36 2 - 1.000 - - - 1.000 - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
23. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 2 - 1.000 - - - 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
24. si:dkey-24c2.6 si:dkey-24c2.6 1 2 - 1.000 - - - 1.000 - - -
25. cbln4 ENSDARG00000061240 67 2 1.000 1.000 - - - - - - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
26. si:ch211-12e1.5 si:ch211-12e1.5 14 2 - - - - 1.000 1.000 - - -
27. PROC PROC 11 2 1.000 1.000 - - - - - - -
28. fam228a ENSDARG00000042936, ENSDARG00000114092 30 2 - 1.000 - - - - 1.000 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
29. DMXL2 ENSDARG00000091293 3 2 - 1.000 - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
30. cdc42ep2 ENSDARG00000053959 32 2 - 1.000 - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
31. CU896645.1 CU896645.1 10 2 - 1.000 - - - 1.000 - - -
32. ZC3H12A ENSDARG00000005271 5 2 - 1.000 - - 1.000 - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
33. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 2 - 1.000 - - - 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
34. SLCO5A1 SLCO5A1 6 2 - 1.000 - - 1.000 - - - -
35. si:dkey-9a20.8 si:dkey-9a20.8 8 2 - 1.000 - - 1.000 - - - -
36. CR788320.1 CR788320.1 1 2 - 1.000 - - - 1.000 - - -
37. ZP2_1 ZP2_1 7 1.99 - - - 0.990 - - 1.000 - -
38. ccbl2 4 1.99 - - - 0.990 1.000 - - - - cysteine conjugate-beta lyase 2, transcript variant X4
39. wdr65 wdr65 251 1.972 - - - 0.972 - 1.000 - - -
40. ptx3b ENSDARG00000079515 10 1.939 0.939 1.000 - - - - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
41. IGFN1_2 IGFN1_2 3 1.936 - - - - 0.936 1.000 - - -
42. si:dkey-233h12.4 si:dkey-233h12.4 2 1.926 1.000 - - - - - - - 0.926
43. si:ch211-221e5.1 si:ch211-221e5.1 2 1.926 - 1.000 - - - - - - 0.926
44. si:dkey-222f2.7 ENSDARG00000071667 1 1.926 - - - - - 1.000 - - 0.926 si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
45. C14orf80 C14orf80 20 1.91 - - - - - 1.000 - - 0.910
46. CR339051.1 CR339051.1 9 1.881 - - - - 0.881 1.000 - - -
47. DLGAP2 DLGAP2 36 1.864 - 1.000 - - - - 0.864 - -
48. SYNPR ENSDARG00000037587 20 1.864 - - - - - 0.864 1.000 - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
49. NETO2 121 1.864 - 1.000 - - - 0.864 - - - neuropilin and tolloid like 2, transcript variant X2
50. drd2a ENSDARG00000056926 40 1.851 - - - - - 0.851 1.000 - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
51. nab1a ENSDARG00000042940 26 1.85 - 1.000 - - - 0.850 - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
52. cnrip1b ENSDARG00000037337 39 1.845 - - - - - 0.845 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
53. CR538726.1 ENSDARG00000097179 321 1.844 - 1.000 - - - - 0.844 - -
54. ZSWIM2 ENSDARG00000075700 8 1.842 1.000 - - 0.842 - - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
55. SLITRK4 ENSDARG00000079781 54 1.841 - 1.000 - - - - 0.841 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
56. lgi3 ENSDARG00000041358 46 1.841 - 1.000 - - - - 0.841 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
57. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 1.835 - 1.000 - 0.835 - - - - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
58. SNORD14 SNORD14 31 1.827 - - - 0.827 - - 1.000 - -
59. AL935272.2 AL935272.2 37 1.826 - 1.000 - - - 0.826 - - -
60. diras1a ENSDARG00000028066 126 1.82 - - - - 0.944 - 0.876 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
61. CR759920.3 CR759920.3 8 1.817 - 1.000 - 0.817 - - - - -
62. CU633740.2 CU633740.2 16 1.817 - - - - - 1.000 0.817 - -
63. alkbh7 ENSDARG00000037906 9 1.813 - - - - 1.000 - - - 0.813 alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
64. si:ch211-3o3.8 si:ch211-3o3.8 2 1.803 - - - - 0.803 1.000 - - -
65. zgc:173716 9 1.803 - 1.000 - 0.803 - - - - - zgc:173716
66. TTBK1_1 TTBK1_1 132 1.794 - 0.903 - - - - 0.891 - -
67. ahdc1 ENSDARG00000093453 233 1.794 1.000 0.794 - - - - - - - AT hook, DNA binding motif, containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-584]
68. plekho1b ENSDARG00000077499 21 1.792 - 1.000 - - - 0.792 - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
69. nsdhl ENSDARG00000099315 63 1.786 0.786 1.000 - - - - - - - NAD(P) dependent steroid dehydrogenase-like [Source:ZFIN;Acc:ZDB-GENE-050417-163]
70. zgc:92249 14 1.782 - 1.000 0.782 - - - - - - zgc:92249
71. CST7 CST7 22 1.782 - 1.000 0.782 - - - - - -
72. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.779 - 1.000 - - - - 0.779 - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
73. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1.779 - - - - - 1.000 0.779 - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
74. zgc:113295_2 ENSDARG00000074768, ENSDARG00000103947 4 1.777 1.000 - - - 0.777 - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
75. slc25a15a ENSDARG00000063539 50 1.775 0.775 - - - 1.000 - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
76. kcnj1b ENSDARG00000002666 87 1.772 - - - - - 0.820 0.952 - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
77. mfsd2b ENSDARG00000030263 12 1.771 - - - - - 0.771 1.000 - - major facilitator superfamily domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041210-308]
78. pou3f2a ENSDARG00000070220 817 1.767 - 1.000 - - - 0.767 - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
79. sept5b ENSDARG00000036031 188 1.764 - 1.000 - - - - 0.764 - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
80. ccdc147 ccdc147 39 1.758 0.758 1.000 - - - - - - -
81. ATP6AP1L ATP6AP1L 164 1.754 - 1.000 - - - - 0.754 - -
82. MYCT1 MYCT1 64 1.753 0.753 1.000 - - - - - - -
83. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.751 1.000 - - - - - - - 0.751 general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
84. CR388231.2 ENSDARG00000105547 25 1.749 - 1.000 - - - 0.749 - - - uncharacterized LOC101883418 [Source:NCBI gene;Acc:101883418]
85. sorcs3b ENSDARG00000077349 72 1.747 1.000 - - - - - 0.747 - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
86. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.746 - 1.000 - 0.746 - - - - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
87. kin ENSDARG00000045515 109 1.746 - - - - - 0.864 0.882 - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
88. si:ch73-36i7.2 si:ch73-36i7.2 5 1.737 - - - - 0.737 1.000 - - -
89. gfi1b ENSDARG00000079947 3 1.735 - 0.809 - - - - - - 0.926 growth factor independent 1B transcription repressor [Source:ZFIN;Acc:ZDB-GENE-091118-129]
90. CABZ01027547.1 CABZ01027547.1 128 1.735 - 1.000 - - - 0.735 - - -
91. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1.734 - - - 0.734 - - 1.000 - -
92. DEPDC4 DEPDC4 1 1.722 - - 0.722 - 1.000 - - - -
93. slc6a6b ENSDARG00000098438 7 1.714 - 0.714 - - 1.000 - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
94. zgc:174688 zgc:174688 170 1.704 - 1.000 - 0.704 - - - - -
95. CABZ01087025.1 ENSDARG00000117232 10 1.703 - - - - 0.777 - - - 0.926
96. ANO8 ANO8 380 1.693 - - - - - 0.797 0.896 - -
97. npsn ENSDARG00000010423 768 1.671 0.786 0.885 - - - - - - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
98. SMARCA4 ENSDARG00000104339 48 1.659 0.942 - - - - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
99. ZNF337_16 ZNF337_16 22 1.652 0.865 - - - - - - - 0.787
100. ANKRD52 ANKRD52 78 1.651 0.939 0.712 - - - - - - -

There are 1638 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA