Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CIT

Gene Name Gene ID Reads Annotation
CIT CIT 212










Genes with expression patterns similar to CIT

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CIT CIT 212 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. mir130b 180 1.763 - 0.774 - - - - - 0.989 - microRNA 130b
3. setx ENSDARG00000022996 385 1.722 - - - - - 0.771 - 0.951 - senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]
4. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.715 - - - - - - 0.736 0.979 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
5. pex16 ENSDARG00000058202 486 1.685 - - - - - - 0.742 0.943 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
6. si:dkey-253d23.2 ENSDARG00000071589 143 1.68 - - - - - - 0.710 0.970 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
7. nrbf2 nrbf2 604 1.663 0.812 - - - - - - 0.851 -
8. mcmbp ENSDARG00000055314 731 1.64 - - - - - - 0.753 0.887 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
9. CU571169.1 ENSDARG00000100253 575 1.593 - 0.778 - - - - - 0.815 -
10. atp6ap1a ENSDARG00000041417 898 1.586 - 0.815 - - - - - 0.771 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
11. tefb ENSDARG00000098103 370 1.569 0.780 0.789 - - - - - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
12. ralgps2 ENSDARG00000026519 1610 1.566 - 0.767 - - - - - 0.799 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
13. cdc23 ENSDARG00000044484 767 1.559 - - - - - - 0.755 0.804 - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
14. rab35 rab35 1287 1.552 - - - - - - 0.711 0.841 -
15. nedd1 ENSDARG00000013472 209 1.549 0.770 0.779 - - - - - - - neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]
16. si:dkeyp-117h8.4 ENSDARG00000043004 457 1.528 - 0.720 - - - 0.808 - - - si:dkeyp-117h8.4 [Source:ZFIN;Acc:ZDB-GENE-030804-4]
17. zgc:162358 zgc:162358 104 1.518 - - - - 0.751 - 0.767 - -
18. CSMD3 CSMD3 0 1.509 - 0.772 - - - 0.737 - - -
19. si:ch73-96b22.1 si:ch73-96b22.1 393 1.506 - 0.760 - - - - 0.746 - -
20. ube2t ENSDARG00000063285 716 1.502 - 0.752 - - - - 0.750 - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
21. zgc:109986 ENSDARG00000102608 348 1.495 - - - - - - 0.740 0.755 - zgc:109986 [Source:ZFIN;Acc:ZDB-GENE-050522-136]
22. ism2 ism2 153 1.472 - 0.717 - - - - 0.755 - -
23. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.468 - - - - - - 0.722 0.746 - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
24. dmtn ENSDARG00000013110 791 1.465 - - - - - - 0.714 0.751 - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
25. wu:fj30f06 480 1.459 - 0.708 - - - - - 0.751 - wu:fj30f06, transcript variant X1
26. snn ENSDARG00000099888 399 1.45 0.720 - - - - - 0.730 - - stannin [Source:ZFIN;Acc:ZDB-GENE-040426-1987]
27. ubxn7 ENSDARG00000009436 652 1.431 - 0.703 - - - - 0.728 - - UBX domain protein 7 [Source:ZFIN;Acc:ZDB-GENE-040704-8]
28. pde6b ENSDARG00000011671 44 0.99 - - - - - - - 0.990 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
29. GDPD4_1 GDPD4_1 190 0.99 - - - - - - - 0.990 -
30. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.99 - - - - - - - 0.990 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
31. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.99 - - - - - - - 0.990 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
32. jam3a ENSDARG00000114589 630 0.99 - - - - - - - 0.990 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
33. si:ch73-167f18.3 si:ch73-167f18.3 78 0.99 - - - - - - - 0.990 -
34. si:dkey-100h21.2 si:dkey-100h21.2 30 0.99 - - - - - - - 0.990 -
35. IKZF4 ENSDARG00000037068 36 0.99 - - - - - - - 0.990 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
36. si:dkey-17e6.2 si:dkey-17e6.2 72 0.989 - - - - - - - 0.989 -
37. adcyap1a ENSDARG00000004015 67 0.989 - - - - - - - 0.989 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
38. VDAC3 ENSDARG00000003695 34 0.988 - - - - - - - 0.988 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
39. spef2 ENSDARG00000098330 59 0.988 - - - - - - - 0.988 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
40. ankdd1b ENSDARG00000025866 51 0.988 - - - - - - - 0.988 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
41. pus7 ENSDARG00000031774 195 0.988 - - - - - - - 0.988 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
42. SHANK1 ENSDARG00000060539 102 0.987 - - - - - - - 0.987 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
43. MAP7 MAP7 98 0.987 - - - - - - - 0.987 -
44. hoxa4a 37 0.987 - - - - - - - 0.987 - homeobox A4a, transcript variant X4
45. si:dkey-157e10.7 si:dkey-157e10.7 105 0.986 - - - - - - - 0.986 -
46. TTF1_4 TTF1_4 504 0.986 - - - - - - - 0.986 -
47. pard3 pard3 161 0.985 - - - - - - - 0.985 -
48. nrxn2b ENSDARG00000063150 343 0.985 - - - - - - - 0.985 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
49. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.984 - - - - - - - 0.984 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
50. rpgra ENSDARG00000056617 77 0.983 - - - - - - - 0.983 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
51. hn1a hn1a 115 0.983 - - - - - - - 0.983 -
52. ly75 ENSDARG00000053113 196 0.983 - - - - - - - 0.983 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
53. prkag3b ENSDARG00000000369 1945 0.982 - - - - - - - 0.982 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
54. BX005410.2 BX005410.2 44 0.982 - - - - - - - 0.982 -
55. mea1 ENSDARG00000039820 589 0.982 - - - - - - - 0.982 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
56. KBTBD13_1 KBTBD13_1 116 0.982 - - - - - - - 0.982 -
57. rwdd2b ENSDARG00000055426 294 0.98 - - - - - - - 0.980 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
58. zgc:174877 ENSDARG00000079278 143 0.98 - - - - - - - 0.980 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
59. tarsl2 ENSDARG00000092774 505 0.98 - - - - - - - 0.980 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
60. slc6a6a ENSDARG00000012534 183 0.98 - - - - - - - 0.980 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
61. zgc:174688 zgc:174688 170 0.979 - - - - - - - 0.979 -
62. b3galtla b3galtla 111 0.978 - - - - - - - 0.978 -
63. aatkb ENSDARG00000104442 392 0.977 - - - - - - - 0.977 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
64. CABZ01045230.1 CABZ01045230.1 158 0.976 - - - - - - - 0.976 -
65. camk2d1 ENSDARG00000043010 669 0.975 - - - - - - - 0.975 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
66. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.975 - - - - - - - 0.975 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
67. enosf1 ENSDARG00000038359 209 0.975 - - - - - - - 0.975 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
68. p2rx3b ENSDARG00000029718 105 0.975 - - - - - - - 0.975 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
69. BX511021.1 ENSDARG00000073936 647 0.975 - - - - - - - 0.975 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
70. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.974 - - - - - - - 0.974 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
71. commd1 ENSDARG00000031203 340 0.974 - - - - - - - 0.974 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
72. nrp2b ENSDARG00000038446 783 0.974 - - - - - - - 0.974 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
73. smarcd2 ENSDARG00000088877 416 0.973 - - - - - - - 0.973 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
74. pdxka ENSDARG00000088959 217 0.972 - - - - - - - 0.972 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
75. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.972 - - - - - - - 0.972 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
76. reep1 ENSDARG00000014854 915 0.971 - - - - - - - 0.971 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
77. fgf12a ENSDARG00000027957 143 0.969 - - - - - - - 0.969 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
78. dclk1a ENSDARG00000018856 177 0.969 - - - - - - - 0.969 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
79. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.968 - - - - - - - 0.968 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
80. ANGPT4 ENSDARG00000076787 140 0.968 - - - - - - - 0.968 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
81. usp4 ENSDARG00000014770 1684 0.968 - - - - - - - 0.968 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
82. ALPK1 195 0.967 - - - - - - - 0.967 - alpha-kinase 1
83. CR381544.1 ENSDARG00000088187 821 0.967 - - - - - - - 0.967 -
84. ncoa6 ENSDARG00000071272 759 0.967 - - - - - - - 0.967 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
85. CABZ01080599.2 CABZ01080599.2 192 0.965 - - - - - - - 0.965 -
86. NHSL2 ENSDARG00000089066 374 0.964 - - - - - - - 0.964 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
87. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.964 - - - - - - - 0.964 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
88. timm10 ENSDARG00000069116 4459 0.963 - - - - - - - 0.963 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
89. si:dkey-8k3.2 ENSDARG00000038424 285 0.963 - - - - - - - 0.963 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
90. zgc:122979 ENSDARG00000004187 61 0.963 - - - - - - - 0.963 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
91. HYKK HYKK 261 0.963 - - - - - - - 0.963 -
92. adora1 adora1 149 0.963 - - - - - - - 0.963 -
93. TCAIM ENSDARG00000079881 424 0.962 - - - - - - - 0.962 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
94. CR790363.1 ENSDARG00000097364 145 0.96 - - - - - - - 0.960 -
95. per3 ENSDARG00000010519 331 0.957 - - - - - - - 0.957 - period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]
96. si:dkey-169l5.3 si:dkey-169l5.3 239 0.956 - - - - - - - 0.956 -
97. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.955 - - - - - - - 0.955 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
98. ENSDARG00000029117 ENSDARG00000029117 80 0.954 - - - - - - - 0.954 -
99. C20H1orf112 C20H1orf112 316 0.954 - - - - - - - 0.954 -
100. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.953 - - - - - - - 0.953 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]

There are 873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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