Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CIRH1A

Gene Name Gene ID Reads Annotation
CIRH1A CIRH1A 6975











Genes with expression patterns similar to CIRH1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CIRH1A CIRH1A 6975 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. HERC2 ENSGALG00000016739 9900 1.518 - - - - - - 0.757 0.761 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
3. SOD1 ENSGALG00000015844 35836 1.501 - - - - - - 0.738 0.763 - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
4. PPIF ENSGALG00000004809 5586 1.419 - - 0.701 - - - - 0.718 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
5. PRR5 ENSGALG00000014213 3408 0.944 - - - - - - - 0.944 - - proline rich 5 [Source:NCBI gene;Acc:418237]
6. NT5C3A ENSGALG00000031397 6667 0.932 - - - - - - - 0.932 - - 5'-nucleotidase, cytosolic IIIA [Source:NCBI gene;Acc:395080]
7. TM9SF2 ENSGALG00000016878 11548 0.882 - - - - - - - 0.882 - - transmembrane 9 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11865]
8. GTF2F2 ENSGALG00000016974 7524 0.859 - - - - - - - 0.859 - - general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
9. gga-mir-6599 ENSGALG00000028121 4746 0.824 - - - - - - 0.824 - - - gga-mir-6599 [Source:miRBase;Acc:MI0022544]
10. INCENP ENSGALG00000007537 16617 0.822 - - - - - - 0.822 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
11. CRLS1 ENSGALG00000009214 8652 0.817 - - - - - - 0.817 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
12. TPRG1L ENSGALG00000001024 9809 0.813 - - - - - - 0.813 - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
13. HSD17B11 ENSGALG00000010979 3104 0.811 - - - - - - 0.811 - - - hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]
14. SLC27A4 ENSGALG00000004965 3278 0.81 - - - - - - - 0.810 - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
15. CCDC93 ENSGALG00000012129 2405 0.809 - - - - - - - 0.809 - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
16. EXOSC10 ENSGALG00000003086 3223 0.805 - - - - - - 0.805 - - - exosome component 10 [Source:NCBI gene;Acc:419454]
17. RFC5 ENSGALG00000026517 26113 0.805 - - - - - - 0.805 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
18. RABIF ENSGALG00000000436 6449 0.802 - - - - - - 0.802 - - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
19. UAP1 ENSGALG00000002725 3016 0.801 - - - - - - - - 0.801 - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12457]
20. C11H16ORF80 C11H16ORF80 18673 0.798 - - - - - - 0.798 - - -
21. GPR162 ENSGALG00000022926 7181 0.797 - - - - - - 0.797 - - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
22. PLRG1 ENSGALG00000009257 8613 0.795 - - - - - - 0.795 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
23. SRP68 ENSGALG00000002062 7370 0.793 - - - - - - 0.793 - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
24. AZI1 AZI1 6732 0.793 - - - - - - 0.793 - - -
25. DYM ENSGALG00000037426 1513 0.791 - - - - - - 0.791 - - - dymeclin [Source:NCBI gene;Acc:426843]
26. STRBP ENSGALG00000029927 3516 0.79 - - - - - - 0.790 - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
27. NID2 ENSGALG00000012394 6717 0.79 - - - - - - 0.790 - - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
28. MRPS18A ENSGALG00000010296 11039 0.79 - - - - - - - - 0.790 - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
29. TXNDC17 ENSGALG00000027950 45004 0.789 - - - - - - 0.789 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
30. THG1L ENSGALG00000003722 7497 0.788 - - - - - - - 0.788 - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
31. WDFY2 ENSGALG00000017019 2384 0.788 - - - - - - 0.788 - - - WD repeat and FYVE domain containing 2 [Source:NCBI gene;Acc:770107]
32. WDFY1 ENSGALG00000005158 2512 0.787 - - - - - - - - 0.787 - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
33. NCAPD2 ENSGALG00000039448 8658 0.786 - - - - - - 0.786 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
34. UCHL3 ENSGALG00000016921 16208 0.786 - - - - - - 0.786 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
35. BNIP3L ENSGALG00000043405 10316 0.785 - - - - - - 0.785 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
36. MFAP1 ENSGALG00000028295 6043 0.784 - - - - - - 0.784 - - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
37. UTP11L UTP11L 11927 0.784 - - - - - - 0.784 - - -
38. RBP5 ENSGALG00000014662 31268 0.782 - - - - - - 0.782 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
39. PFKL ENSGALG00000006543 4361 0.78 - - - - - - 0.780 - - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
40. MRPL54 ENSGALG00000027611 39450 0.779 - - - - - - 0.779 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
41. CLK1 ENSGALG00000028438 3550 0.778 - - - - - - 0.778 - - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
42. DHX37 ENSGALG00000002964 3497 0.778 - - - - - - 0.778 - - - DEAH-box helicase 37 [Source:HGNC Symbol;Acc:HGNC:17210]
43. ENSGALG00000002903 ENSGALG00000002903 18304 0.776 - - - - - - 0.776 - - -
44. NEK1 ENSGALG00000009683 4305 0.775 - - - - - - 0.775 - - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
45. PMPCA ENSGALG00000001950 6766 0.775 - - - - - - 0.775 - - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
46. FBLN1 ENSGALG00000014233 5062 0.775 - - - - - - 0.775 - - - fibulin 1 [Source:NCBI gene;Acc:373979]
47. PIK3IP1 ENSGALG00000006942 8388 0.774 - - - - - - 0.774 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
48. ASH2L ENSGALG00000003233 4814 0.773 - - - - - - 0.773 - - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
49. C16orf93 C16orf93 3351 0.773 - - - - - - - - 0.773 -
50. TPM4 ENSGALG00000002563 15621 0.772 - - - - - - 0.772 - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
51. HMGCS1 ENSGALG00000014862 2846 0.772 - - - - - - 0.772 - - - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
52. UBIAD1 ENSGALG00000003358 4675 0.772 - - - - - - 0.772 - - - UbiA prenyltransferase domain containing 1 [Source:NCBI gene;Acc:419456]
53. MAN2B2 ENSGALG00000015537 2267 0.771 - - - - - - 0.771 - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
54. RRP36 ENSGALG00000028056 7560 0.771 - - - - - - 0.771 - - - ribosomal RNA processing 36
55. DDX19B ENSGALG00000039967 49600 0.77 - - - - - - 0.770 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
56. IPO8 ENSGALG00000012953 499 0.77 - - - - - - - - 0.770 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
57. SNRNP40 ENSGALG00000000615 32298 0.77 - - - - - - 0.770 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
58. gga-mir-1778 ENSGALG00000025181 8765 0.769 - - - - - - 0.769 - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
59. BMS1 ENSGALG00000002624 8339 0.768 - - - - - - 0.768 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
60. GPR107 ENSGALG00000004052 3392 0.768 - - - - - - 0.768 - - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
61. NDUFC2 ENSGALG00000029172 26136 0.768 - - - - - - 0.768 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
62. NDUFA7 ENSGALG00000000629 14046 0.767 - - - - - - 0.767 - - - NADH:ubiquinone oxidoreductase subunit A7
63. VBP1 VBP1 14482 0.767 - - - - - - 0.767 - - -
64. TFB2M ENSGALG00000010651 4374 0.766 - - - - - - 0.766 - - - transcription factor B2, mitochondrial
65. NDUFAF7 ENSGALG00000010609 2765 0.766 - - - - - - 0.766 - - - NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]
66. CTNNBIP1 ENSGALG00000026306 8049 0.763 - - - - - - 0.763 - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
67. TMEM167A ENSGALG00000027332 13862 0.761 - - - - - - 0.761 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
68. SCML2 ENSGALG00000016537 9348 0.761 - - - - - - 0.761 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
69. AP1B1 ENSGALG00000042213 4828 0.76 - - - - - - 0.760 - - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
70. DYNLT3 ENSGALG00000016259 340 0.76 - - - - - - - - 0.760 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
71. ELMO2 ENSGALG00000007246 4569 0.759 - - - - - - - - 0.759 - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
72. CDON ENSGALG00000035419 2240 0.758 - - - - - - 0.758 - - - cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17104]
73. TRIP13 ENSGALG00000033834 6590 0.757 - - - - - - 0.757 - - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
74. BRP44 BRP44 17093 0.757 - - - - - - 0.757 - - -
75. R3HDM1 ENSGALG00000012246 6580 0.757 - - - - - - 0.757 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
76. MED19 ENSGALG00000007341 4913 0.757 - - - - - - 0.757 - - - mediator complex subunit 19 [Source:HGNC Symbol;Acc:HGNC:29600]
77. C15orf40 C15orf40 3212 0.756 - - - - - - 0.756 - - -
78. C2CD5 ENSGALG00000013210 3060 0.755 - - - - - - 0.755 - - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
79. NENF ENSGALG00000009821 4826 0.755 - - - - - - 0.755 - - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
80. CLSPN ENSGALG00000002346 2590 0.755 - - - - - - 0.755 - - - claspin [Source:NCBI gene;Acc:428223]
81. XRN2 ENSGALG00000008372 22164 0.755 - - - - - - 0.755 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
82. AN1ZNF5L ENSGALG00000014589 21148 0.754 - - - - - - 0.754 - - - AN1-type zinc finger protein 5-like, transcript variant X2
83. PMS1 ENSGALG00000034011 2031 0.754 - - - - - - 0.754 - - - PMS1 homolog 1, mismatch repair system component [Source:NCBI gene;Acc:423980]
84. TCEB1 TCEB1 17818 0.753 - - - - - - - 0.753 - -
85. MCTS1 ENSGALG00000008517 27514 0.753 - - - - - - 0.753 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
86. NUP54 ENSGALG00000011506 4945 0.752 - - - - - - 0.752 - - - nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]
87. H1F0 ENSGALG00000044240 1206 0.752 - - - - - - - 0.752 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
88. MAMLD1 ENSGALG00000009098 1231 0.752 - - - - - - - 0.752 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
89. MYL2 ENSGALG00000004582 2245 0.752 - - - - - - - 0.752 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
90. RNF19A ENSGALG00000038772 380 0.752 - - - - - - - 0.752 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
91. SMARCD2 ENSGALG00000029304 11867 0.751 - - - - - - - - 0.751 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
92. SMC4 ENSGALG00000009553 15715 0.751 - - - - - - 0.751 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
93. OGG1 ENSGALG00000006651 1320 0.751 - - - - - - - 0.751 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
94. SORD ENSGALG00000031408 2119 0.751 - - - - - - - 0.751 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
95. CDC26 ENSGALG00000026095 3491 0.751 - - - - - - - 0.751 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
96. GPR180 ENSGALG00000016897 1545 0.751 - - - - - - - 0.751 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
97. SEC63 ENSGALG00000015308 11596 0.75 - - - - - - 0.750 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
98. RAD18 ENSGALG00000008368 7214 0.75 - - - - - - - 0.750 - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
99. ATP6AP1 ENSGALG00000008836 4343 0.75 - - - - - - 0.750 - - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
100. ENSGALG00000023314 ENSGALG00000023314 6331 0.75 - - - - - - - 0.750 - -

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA