Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CIR1

Gene Name Gene ID Reads Annotation
CIR1 ENSGALG00000014276 7189 corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]











Genes with expression patterns similar to CIR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CIR1 ENSGALG00000014276 7189 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
2. SIVA1 ENSGALG00000011619 15130 1.656 - - - - - - 0.737 0.919 - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
3. NCDN ENSGALG00000002408 6180 1.59 - - - - - - 0.708 0.882 - - neurochondrin [Source:NCBI gene;Acc:419633]
4. LOC776067 ENSGALG00000016808 9164 1.565 - - - - - - 0.763 0.802 - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
5. IBA57 ENSGALG00000005328 4362 1.563 - - - - - - 0.716 0.847 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
6. RFC5 ENSGALG00000026517 26113 1.526 - - - - - - 0.728 0.798 - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
7. FNBP1L ENSGALG00000005850 9219 1.509 - - - - - - 0.730 0.779 - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
8. GOT1 ENSGALG00000007484 21664 1.491 - - - - - - 0.732 0.759 - - glutamic-oxaloacetic transaminase 1 [Source:NCBI gene;Acc:396261]
9. RANGAP1 ENSGALG00000011966 20170 1.491 - - - - - - 0.712 0.779 - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
10. VBP1 VBP1 14482 1.485 - - - - - - 0.771 0.714 - -
11. ARMC1 ENSGALG00000036567 5476 0.94 - - - - - - - 0.940 - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
12. DPM2 ENSGALG00000005066 9121 0.925 - - - - - - - 0.925 - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
13. MPDZ ENSGALG00000005846 3179 0.904 - - - - - - - 0.904 - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
14. MRPL23 ENSGALG00000006561 13737 0.904 - - - - - - - 0.904 - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
15. CDA ENSGALG00000007382 1544 0.893 - - - - - - - 0.893 - - cytidine deaminase [Source:NCBI gene;Acc:771849]
16. CYB5R3 ENSGALG00000014122 7664 0.892 - - - - - - - 0.892 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
17. THNSL2 ENSGALG00000015939 2184 0.892 - - - - - - - 0.892 - - threonine synthase like 2 [Source:HGNC Symbol;Acc:HGNC:25602]
18. PAXBP1 ENSGALG00000036833 5573 0.886 - - - - - - - 0.886 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
19. EFR3A ENSGALG00000039533 3826 0.884 - - - - - - - 0.884 - - EFR3 homolog A [Source:HGNC Symbol;Acc:HGNC:28970]
20. ICT1 ICT1 11725 0.884 - - - - - - - 0.884 - -
21. UBA3 ENSGALG00000013410 6923 0.88 - - - - - - - 0.880 - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
22. TSPAN5 ENSGALG00000012227 8703 0.879 - - - - - - - 0.879 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
23. CCDC75 CCDC75 4865 0.878 - - - - - - - 0.878 - -
24. NKRF ENSGALG00000008645 3531 0.878 - - - - - - - 0.878 - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
25. AP1G1 12403 0.877 - - - - - - - 0.877 - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
26. CNOT2 ENSGALG00000010042 7612 0.873 - - - - - - - 0.873 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
27. SURF2 ENSGALG00000003181 3500 0.871 - - - - - - - 0.871 - - surfeit 2 [Source:NCBI gene;Acc:417156]
28. POLR1E ENSGALG00000005395 8953 0.871 - - - - - - - 0.871 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
29. C1H21ORF33 ENSGALG00000019171 8910 0.869 - - - - - - - 0.869 - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
30. GTSE1 ENSGALG00000004897 2865 0.868 - - - - - - - 0.868 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
31. ACTR3B ENSGALG00000006292 2235 0.868 - - - - - - - 0.868 - - ARP3 actin related protein 3 homolog B, transcript variant X1
32. SMN ENSGALG00000002430 7515 0.868 - - - - - - - 0.868 - - survival of motor neuron [Source:NCBI gene;Acc:374025]
33. LOC427439 ENSGALG00000003605 9312 0.867 - - - - - - - 0.867 - - Nipped-B homolog-like, transcript variant X1
34. CLIC4 ENSGALG00000001262 11497 0.866 - - - - - - - 0.866 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
35. AGFG1 ENSGALG00000003052 4766 0.865 - - - - - - 0.865 - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
36. SUPT4H1 ENSGALG00000000944 8675 0.865 - - - - - - - 0.865 - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
37. SEMA3C ENSGALG00000040444 5404 0.865 - - - - - - - 0.865 - - semaphorin 3C [Source:NCBI gene;Acc:374090]
38. ENSGALG00000005785 ENSGALG00000005785 1570 0.864 - - - - - - - 0.864 - -
39. KIAA1551 ENSGALG00000045168 3435 0.864 - - - - - - - 0.864 - - KIAA1551, transcript variant X1
40. SECISBP2 ENSGALG00000010694 6990 0.864 - - - - - - - 0.864 - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
41. PNPLA8 ENSGALG00000009505 2910 0.863 - - - - - - - 0.863 - - patatin like phospholipase domain containing 8 [Source:NCBI gene;Acc:417785]
42. NRD1 NRD1 10827 0.863 - - - - - - - 0.863 - -
43. SLC35F6 ENSGALG00000016589 5172 0.862 - - - - - - - 0.862 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
44. CAMK2G ENSGALG00000005088 5037 0.862 - - - - - - - 0.862 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
45. RBM34 ENSGALG00000029915 5618 0.861 - - - - - - - 0.861 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
46. SLC37A4 ENSGALG00000007716 2263 0.858 - - - - - - - 0.858 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
47. FAM160B1 ENSGALG00000031404 3153 0.858 - - - - - - - 0.858 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
48. PNPT1 ENSGALG00000043545 1306 0.857 - - - - - - - 0.857 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
49. POLDIP3 ENSGALG00000011863 6424 0.856 - - - - - - - 0.856 - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
50. DIABLO ENSGALG00000004412 9499 0.856 - - - - - - - 0.856 - - diablo IAP-binding mitochondrial protein, transcript variant X3
51. MED20 ENSGALG00000003474 4583 0.856 - - - - - - - 0.856 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
52. BOC ENSGALG00000015152 4868 0.855 - - - - - - - 0.855 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
53. MRTO4 ENSGALG00000003991 13642 0.855 - - - - - - - 0.855 - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
54. WBP4 ENSGALG00000016949 5858 0.855 - - - - - - - 0.855 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
55. COQ5 ENSGALG00000007185 5614 0.855 - - - - - - - 0.855 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
56. BRF1 ENSGALG00000011705 3406 0.854 - - - - - - - 0.854 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
57. PDCD7 ENSGALG00000021027 3807 0.854 - - - - - - - 0.854 - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
58. MOB2 ENSGALG00000030499 3658 0.853 - - - - - - - 0.853 - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
59. ABTB1 ENSGALG00000005999 2446 0.853 - - - - - - - 0.853 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
60. C5H15ORF57 C5H15ORF57 4113 0.853 - - - - - - - 0.853 - -
61. FBXL7 ENSGALG00000031947 2480 0.853 - - - - - - - 0.853 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
62. ASAP2 ENSGALG00000016419 1393 0.853 - - - - - - - 0.853 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
63. MED14 ENSGALG00000016238 4685 0.852 - - - - - - - 0.852 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
64. CCNI ENSGALG00000011457 3203 0.852 - - - - - - - 0.852 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
65. ST14 ENSGALG00000001331 1655 0.852 - - - - - - - 0.852 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
66. SIAH2 ENSGALG00000010395 2126 0.851 - - - - - - - 0.851 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
67. NCBP1 ENSGALG00000002087 8907 0.851 - - - - - - - 0.851 - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
68. CLASP2 ENSGALG00000032647 1821 0.849 - - - - - - - 0.849 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
69. TADA1L TADA1L 6659 0.849 - - - - - - - 0.849 - -
70. GPR155 ENSGALG00000014209 1281 0.848 - - - - - - - 0.848 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
71. RUVBL1 ENSGALG00000005931 9379 0.847 - - - - - - 0.847 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
72. KIF3B ENSGALG00000006604 2968 0.847 - - - - - - - 0.847 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
73. C7H2ORF76 ENSGALG00000012113 1947 0.847 - - - - - - - 0.847 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
74. MAN1A1 ENSGALG00000014878 1061 0.846 - - - - - - - 0.846 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
75. SLC4A3 ENSGALG00000011224 2161 0.846 - - - - - - - 0.846 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
76. MMP17 3885 0.846 - - - - - - - 0.846 - - matrix metallopeptidase 17
77. ATP6V0E2 ENSGALG00000020754 2648 0.846 - - - - - - - 0.846 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
78. NEK6 ENSGALG00000001118 20333 0.845 - - - - - - 0.845 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
79. CDC37L1 ENSGALG00000014448 2283 0.845 - - - - - - - 0.845 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
80. LMO4 ENSGALG00000006252 3686 0.844 - - - - - - - 0.844 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
81. TRAPPC12 ENSGALG00000016387 2593 0.842 - - - - - - - 0.842 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
82. PDHX ENSGALG00000033753 2799 0.842 - - - - - - - 0.842 - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
83. TBC1D19 ENSGALG00000029673 1868 0.841 - - - - - - - 0.841 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
84. WDR45B ENSGALG00000001563 5870 0.84 - - - - - - 0.840 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
85. VDAC2 ENSGALG00000005002 12592 0.84 - - - - - - - 0.840 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
86. ALDH6 ALDH6 771 0.839 - - - - - - - 0.839 - -
87. ZC3H11A ENSGALG00000000541 2712 0.838 - - - - - - - 0.838 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
88. TM4SF18 4553 0.838 - - - - - - 0.838 - - - transmembrane 4 L six family member 18, transcript variant X2
89. THAP4 ENSGALG00000006283 1707 0.838 - - - - - - - 0.838 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
90. ECHDC3 ENSGALG00000006690 1299 0.837 - - - - - - - 0.837 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
91. NGFR ENSGALG00000035950 13452 0.836 - - - - - - - 0.836 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
92. SENP2 ENSGALG00000031128 1162 0.835 - - - - - - - 0.835 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
93. TBC1D16 ENSGALG00000007054 2324 0.834 - - - - - - - 0.834 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
94. IDS ENSGALG00000009154 1177 0.834 - - - - - - - 0.834 - - iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
95. C16orf93 C16orf93 3351 0.833 - - - - - - - 0.833 - -
96. RNPS1 ENSGALG00000009288 13588 0.833 - - - - - - 0.833 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
97. N4BP2L1 ENSGALG00000017072 1371 0.832 - - - - - - - 0.832 - - NEDD4 binding protein 2 like 1, transcript variant X2
98. ENSGALG00000026309 ENSGALG00000026309 360 0.831 - - - - - - - 0.831 - -
99. GMFB ENSGALG00000012208 894 0.831 - - - - - - - 0.831 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
100. xcc-b100_1894L ENSGALG00000007564 462 0.831 - - - - - - - 0.831 - - UPF0061 protein xcc-b100_1894-like

There are 443 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA