Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CIR1

Gene Name Gene ID Reads Annotation
CIR1 ENSDARG00000099733 66 corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]










Genes with expression patterns similar to CIR1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CIR1 ENSDARG00000099733 66 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
2. slc22a7a ENSDARG00000056028 2426 2.455 0.818 0.890 - - - 0.747 - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
3. sez6l ENSDARG00000100594 35 2 1.000 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
4. si:ch211-152l15.4 si:ch211-152l15.4 13 2 1.000 1.000 - - - - - - -
5. figf 48 2 1.000 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
6. nmrk1 ENSDARG00000037913 18 2 1.000 1.000 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
7. MLLT4 MLLT4 67 2 1.000 1.000 - - - - - - -
8. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 2 1.000 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
9. SMARCA4 ENSDARG00000104339 48 1.954 - 1.000 - 0.954 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
10. dclre1a ENSDARG00000091768 94 1.946 0.946 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
11. rassf4 ENSDARG00000012460 43 1.941 - 1.000 - 0.941 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
12. supt3h ENSDARG00000098141 18 1.913 0.913 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
13. rhoab ENSDARG00000094673 26 1.904 0.905 - - - - 0.999 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
14. htra1b ENSDARG00000014907 146 1.888 1.000 - - 0.888 - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
15. sdccag3 239 1.887 1.000 - - - - 0.887 - - - serologically defined colon cancer antigen 3, transcript variant X2
16. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.884 - 1.000 - 0.884 - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
17. vcam1 vcam1 243 1.871 0.871 1.000 - - - - - - -
18. pcgf5b ENSDARG00000052388 163 1.87 0.871 - - - - 0.999 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
19. sc:d0139 sc:d0139 233 1.853 - - - 0.858 - 0.995 - - -
20. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.836 1.000 - - 0.836 - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
21. dhrs13a.2 ENSDARG00000111240 491 1.823 - - - 0.839 - 0.984 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
22. KIF2A_1 ENSDARG00000043571 189 1.805 - 1.000 - - 0.805 - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
23. tmem178 ENSDARG00000020758 77 1.802 - 1.000 - - 0.802 - - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
24. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.799 - - - - 0.802 0.997 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
25. UBASH3B_1 UBASH3B_1 28 1.792 - 0.961 - - 0.831 - - - -
26. si:ch73-173m3.3 si:ch73-173m3.3 425 1.784 - 0.872 - - - 0.912 - - -
27. si:dkey-9i23.6 ENSDARG00000094678 58 1.782 1.000 - - - 0.782 - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
28. aatkb ENSDARG00000104442 392 1.778 0.778 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
29. ccdc80l2 ENSDARG00000044695 150 1.77 - - - 0.799 - 0.971 - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
30. EXD1 ENSDARG00000098669 27 1.764 0.823 0.941 - - - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
31. FNBP1 FNBP1 441 1.752 0.868 - - - - 0.884 - - -
32. rab3da ENSDARG00000018107 28 1.75 1.000 - - - 0.750 - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
33. DOCK4 DOCK4 78 1.741 0.741 1.000 - - - - - - -
34. CABZ01057013.1 CABZ01057013.1 1308 1.741 - - - 0.841 - 0.900 - - -
35. C17H15orf41 C17H15orf41 313 1.74 - 0.843 - 0.897 - - - - -
36. CU694319.1 CU694319.1 72 1.737 1.000 - - - 0.737 - - - -
37. wdr17 ENSDARG00000075098 83 1.733 0.733 1.000 - - - - - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
38. dapk3 ENSDARG00000074447 12 1.732 1.000 0.732 - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
39. GRIN2B GRIN2B 140 1.723 0.723 1.000 - - - - - - -
40. dennd1b ENSDARG00000101868 328 1.714 - - - 0.754 - 0.960 - - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
41. gbas gbas 735 1.711 - - - 0.801 - 0.910 - - -
42. MYOF ENSDARG00000006112 436 1.707 0.729 - - - - 0.978 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
43. FAM117B FAM117B 225 1.707 - 1.000 - 0.707 - - - - -
44. phactr3a ENSDARG00000058243 150 1.683 0.871 - - 0.812 - - - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
45. setd2 ENSDARG00000062244 808 1.681 - - - 0.730 - 0.951 - - - SET domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2140]
46. gpr143 ENSDARG00000034572 559 1.68 0.770 - - - - 0.910 - - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
47. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.665 - - - 0.736 - 0.929 - - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
48. CORIN ENSDARG00000101281 654 1.657 - - - 0.847 - 0.810 - - - corin, serine peptidase [Source:ZFIN;Acc:ZDB-GENE-060224-3]
49. nlgn3a ENSDARG00000104786 91 1.653 - 0.740 - 0.913 - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
50. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 1.65 - - - 0.828 0.822 - - - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
51. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.615 0.735 0.880 - - - - - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
52. si:dkey-157e10.7 si:dkey-157e10.7 105 1.595 - - - 0.890 0.705 - - - -
53. ARMCX3 ARMCX3 328 1.537 - - - 0.729 0.808 - - - -
54. gnai2b ENSDARG00000017294 686 1.516 0.750 - - - - 0.766 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
55. ing1 ENSDARG00000019116 394 1.508 0.723 0.785 - - - - - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
56. si:dkey-251i10.2 ENSDARG00000093957 4424 1.495 0.763 0.732 - - - - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
57. aaas ENSDARG00000102274 1192 1.492 0.720 - - - 0.772 - - - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
58. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.471 - - - 0.740 - 0.731 - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
59. pde12 ENSDARG00000030964 615 1.467 - - - 0.749 0.718 - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
60. cebpg ENSDARG00000036073 3791 1.44 - - - 0.728 - 0.712 - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
61. st6gal1 ENSDARG00000044514 142 1 - 1.000 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
62. CABZ01007222.1 CABZ01007222.1 78 1 - 1.000 - - - - - - -
63. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - 1.000 - - - - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
64. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
65. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
66. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
67. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - 1.000 - - - - - - -
68. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - 1.000 - - - - - - -
69. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
70. si:ch211-198c19.2 si:ch211-198c19.2 165 1 - 1.000 - - - - - - -
71. mcm5_1 ENSDARG00000019507 10 1 - 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
72. ftr42 4 1 1.000 - - - - - - - - finTRIM family, member 42
73. RPS11 ENSDARG00000053058 32 1 1.000 - - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
74. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1 - 1.000 - - - - - - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
75. si:ch211-237l4.6 ENSDARG00000056915 49 1 - 1.000 - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
76. slc6a19b ENSDARG00000056719 140 1 - - - - - 1.000 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
77. C24H11orf65 C24H11orf65 1 1 - 1.000 - - - - - - -
78. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
79. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
80. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
81. CABZ01081748.1 ENSDARG00000102139 31 1 1.000 - - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
82. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
83. BX928744.1 BX928744.1 15 1 1.000 - - - - - - - -
84. si:ch211-63o20.7 ENSDARG00000042000 93 1 1.000 - - - - - - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
85. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
86. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
87. ARSI_1 ARSI_1 38 1 1.000 - - - - - - - -
88. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
89. GAS2 18 1 - 1.000 - - - - - - - growth arrest specific 2, transcript variant X1
90. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
91. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
92. SDSL ENSDARG00000074698 34 1 - 1.000 - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
93. LRG1 LRG1 304 1 - 1.000 - - - - - - -
94. mlc1 ENSDARG00000063026 29 1 1.000 - - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
95. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
96. CABZ01064968.2 CABZ01064968.2 20 1 1.000 - - - - - - - -
97. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
98. CR759816.1 ENSDARG00000098977 27 1 - - - - - 1.000 - - -
99. fez1 ENSDARG00000023174 701 1 - 1.000 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
100. SNORA38 SNORA38 574 1 1.000 - - - - - - - -

There are 1581 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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