Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CIB1

Gene Name Gene ID Reads Annotation
CIB1 ENSGALG00000008302 13946 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]











Genes with expression patterns similar to CIB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CIB1 ENSGALG00000008302 13946 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
2. COMMD7 ENSGALG00000006630 11491 1.704 - - - - - - - 0.822 - 0.882 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
3. SMC4 ENSGALG00000009553 15715 1.683 - - - - - - 0.830 - - 0.853 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
4. PPFIA1 ENSGALG00000035774 5258 1.633 - - - - - - 0.745 - - 0.888 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
5. HAPLN1 ENSGALG00000015627 14942 1.632 - - - - - - 0.798 0.834 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
6. TMLHE ENSGALG00000007443 3619 1.628 - - - - - - 0.759 - - 0.869 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
7. ARHGAP21 ENSGALG00000007721 3961 1.619 - - - - - - 0.746 - - 0.873 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
8. WTAP ENSGALG00000011660 10811 1.615 - - - - - - 0.712 0.903 - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
9. PPP1R2 ENSGALG00000029789 11594 1.612 - - - - - - 0.738 0.874 - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
10. MRPL50 ENSGALG00000015543 11649 1.605 - - - - - - 0.722 - - 0.883 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
11. DCAF7 ENSGALG00000000510 8681 1.604 - - - - - - 0.790 0.814 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
12. PTX3 ENSGALG00000028284 2984 1.601 - - - - - - 0.747 - - 0.854 pentraxin 3 [Source:NCBI gene;Acc:548626]
13. CUTC ENSGALG00000037283 2530 1.599 - - - - - - 0.779 0.820 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
14. MED9 ENSGALG00000031214 10779 1.598 - - - - - - 0.707 0.891 - - mediator complex subunit 9 [Source:NCBI gene;Acc:416506]
15. SNAI1 ENSGALG00000008018 3930 1.591 - - - - - - - 0.814 - 0.777 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
16. COL5A2 ENSGALG00000031112 18358 1.589 - - - - - - 0.778 - - 0.811 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
17. RAB10 ENSGALG00000016535 5272 1.586 - - - - - - 0.788 - - 0.798 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
18. MB21D1 2460 1.585 - - - - - - 0.709 - - 0.876 Mab-21 domain containing 1
19. SPTSSA ENSGALG00000025755 3361 1.578 - - - - - - 0.729 - - 0.849 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
20. RGL1 ENSGALG00000004728 3004 1.574 - - - - - - 0.770 0.804 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
21. MICU3 ENSGALG00000013661 1466 1.573 - - - - - - 0.743 0.830 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
22. FANCL ENSGALG00000030022 7423 1.572 - - - - - - 0.732 - - 0.840 FA complementation group L [Source:NCBI gene;Acc:421202]
23. ERCC6 ENSGALG00000006254 3452 1.568 - - - - - - 0.724 - - 0.844 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
24. NEO1 ENSGALG00000001774 10165 1.568 - - - - - - 0.745 - - 0.823 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
25. GORASP1 ENSGALG00000006033 4033 1.567 - - - - - - 0.739 - - 0.828 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
26. CLIC4 ENSGALG00000001262 11497 1.565 - - - - - - 0.721 - - 0.844 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
27. NABP1 ENSGALG00000025884 4195 1.561 - - - - - - 0.738 0.823 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
28. GGA.31975 GGA.31975 8825 1.556 - - - - - - 0.742 - - 0.814
29. RAD18 ENSGALG00000008368 7214 1.552 - - - - - - 0.764 - - 0.788 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
30. UCHL3 ENSGALG00000016921 16208 1.551 - - - - - - 0.709 - - 0.842 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
31. PCNP ENSGALG00000015330 15750 1.55 - - - - - - 0.707 - - 0.843 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
32. COX17 ENSGALG00000014981 5646 1.545 - - - - - - 0.763 - - 0.782 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
33. FYTTD1 ENSGALG00000007581 9341 1.544 - - - - - - 0.816 - - 0.728 forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
34. QDPR ENSGALG00000030070 6953 1.544 - - - - - - 0.742 - - 0.802 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
35. HSPA4 ENSGALG00000040882 20966 1.544 - - - - - - 0.841 - - 0.703 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
36. DGCR2 ENSGALG00000005891 8405 1.541 - - - - - - 0.758 - - 0.783 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
37. FNBP1L ENSGALG00000005850 9219 1.538 - - - - - - 0.784 - - 0.754 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
38. SNRNP40 ENSGALG00000000615 32298 1.532 - - - - - - 0.828 - - 0.704 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
39. ODF2 ENSGALG00000004767 3972 1.524 - - - - - - 0.724 - - 0.800 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
40. TMED7 ENSGALG00000028484 21008 1.524 - - - - - - 0.705 - - 0.819 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
41. SYNE2 ENSGALG00000011811 5542 1.523 - - - - - - 0.701 0.822 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
42. NAA30 ENSGALG00000012098 4681 1.508 - - - - - - 0.750 - - 0.758 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
43. POLR2B ENSGALG00000011387 4864 1.495 - - - - - - 0.768 - - 0.727 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
44. SRF ENSGALG00000032029 6983 1.485 - - - - - - 0.724 - - 0.761 serum response factor [Source:NCBI gene;Acc:396103]
45. TMEM115 ENSGALG00000026965 13050 1.47 - - - - - - 0.734 - - 0.736 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
46. LIMS1 ENSGALG00000029970 7244 1.455 - - - - - - 0.721 - - 0.734 LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
47. CAMSAP1 ENSGALG00000001692 2617 1.452 - - - - - - 0.731 - - 0.721 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
48. EGLN1 ENSGALG00000041422 11032 1.452 - - - - - - 0.743 0.709 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
49. MRPL24 ENSGALG00000030994 24264 1.443 - - - - - - 0.707 0.736 - - mitochondrial ribosomal protein L24 [Source:HGNC Symbol;Acc:HGNC:14037]
50. ZDHHC14 ENSGALG00000013695 2648 1.438 - - - - - - 0.724 - - 0.714 zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
51. ZRANB1 ENSGALG00000031474 3909 1.435 - - - - - - 0.727 - - 0.708 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
52. FGFR2 ENSGALG00000009495 15391 1.429 - - - - - - 0.704 0.725 - - fibroblast growth factor receptor 2 [Source:NCBI gene;Acc:396259]
53. EBNA1BP2 ENSGALG00000009045 17453 1.407 - - - - - - 0.706 - - 0.701 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
54. UBR5 ENSGALG00000031282 12143 0.942 - - - - - - - 0.942 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
55. HN1 HN1 34386 0.931 - - - - - - - 0.931 - -
56. ODZ3 ODZ3 2213 0.919 - - - - - - - - - 0.919
57. RWDD2B ENSGALG00000015807 3601 0.911 - - - - - - - - - 0.911 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
58. MIER1 ENSGALG00000011118 1418 0.91 - - - - - - - - - 0.910 MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
59. POLR1B ENSGALG00000032273 3845 0.909 - - - - - - - - - 0.909 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
60. CCDC88A ENSGALG00000043587 2208 0.908 - - - - - - - - - 0.908 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
61. KCNMA1 ENSGALG00000004980 261 0.905 - - - - - - - - - 0.905 potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
62. SNRNP48 ENSGALG00000013005 1468 0.905 - - - - - - - - - 0.905 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
63. GSTAL2 ENSGALG00000028551 4899 0.904 - - - - - - - - - 0.904 glutathione S-transferase alpha-like 2, transcript variant X4
64. AGGF1 ENSGALG00000004311 3011 0.903 - - - - - - - - - 0.903 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
65. ACADL ENSGALG00000002891 8058 0.902 - - - - - - - - - 0.902 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
66. TMEM165 ENSGALG00000027886 5468 0.898 - - - - - - - - - 0.898 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
67. ETFDH ENSGALG00000009442 7671 0.898 - - - - - - - - - 0.898 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
68. LAMP2 ENSGALG00000008572 198 0.893 - - - - - - - - - 0.893 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
69. DIAPH3 ENSGALG00000016937 1069 0.892 - - - - - - - - - 0.892 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
70. SMC5 ENSGALG00000015118 1799 0.89 - - - - - - - - - 0.890 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
71. MYOCD ENSGALG00000001021 351 0.889 - - - - - - - - - 0.889 myocardin [Source:NCBI gene;Acc:427790]
72. QSER1 ENSGALG00000012030 4490 0.889 - - - - - - - - - 0.889 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
73. PRR14L ENSGALG00000028473 439 0.889 - - - - - - - - - 0.889 proline rich 14-like, transcript variant X5
74. TRPC4AP ENSGALG00000003147 3967 0.887 - - - - - - - - - 0.887 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
75. ENSGALG00000003515 ENSGALG00000003515 1003 0.887 - - - - - - - - - 0.887
76. MTSS1 ENSGALG00000041969 1312 0.887 - - - - - - - - - 0.887 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
77. FBXO25 ENSGALG00000016359 1547 0.884 - - - - - - - - - 0.884 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
78. PDPN ENSGALG00000030096 647 0.884 - - - - - - - - - 0.884 podoplanin, transcript variant X4
79. SPC25 ENSGALG00000010900 14238 0.883 - - - - - - - - - 0.883 SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
80. ATP5C1 53961 0.882 - - - - - - - - - 0.882 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
81. ENSGALG00000005389 ENSGALG00000005389 553 0.881 - - - - - - - - - 0.881
82. SMC6 ENSGALG00000016467 3321 0.881 - - - - - - - - - 0.881 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
83. PLA2G15 ENSGALG00000041787 762 0.881 - - - - - - - - - 0.881 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
84. CKAP2 ENSGALG00000017025 25020 0.881 - - - - - - - - - 0.881 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
85. FZD6 ENSGALG00000030626 3336 0.879 - - - - - - - - - 0.879 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
86. MPP5 ENSGALG00000009581 724 0.879 - - - - - - - - - 0.879 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
87. KMT2C 6306 0.879 - - - - - - - - - 0.879 lysine methyltransferase 2C, transcript variant X14
88. PROM1 ENSGALG00000014496 2494 0.879 - - - - - - - - - 0.879 prominin 1 [Source:NCBI gene;Acc:422825]
89. SSR2 ENSGALG00000000764 32190 0.879 - - - - - - - - - 0.879 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
90. CCND1 ENSGALG00000007555 6715 0.879 - - - - - - - - - 0.879 cyclin D1 [Source:NCBI gene;Acc:396341]
91. MRPS31 ENSGALG00000017033 9287 0.879 - - - - - - - - - 0.879 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
92. DAP3 ENSGALG00000019796 13278 0.878 - - - - - - - - - 0.878 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
93. GRK4 ENSGALG00000015645 1065 0.878 - - - - - - - - - 0.878 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
94. HDHD1 HDHD1 2928 0.875 - - - - - - - - - 0.875
95. COG5 ENSGALG00000042764 4205 0.875 - - - - - - - - - 0.875 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
96. ZNF395 ENSGALG00000034140 1868 0.873 - - - - - - - - - 0.873 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
97. HYAL3 ENSGALG00000029000 712 0.873 - - - - - - - - - 0.873 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
98. WDSUB1 ENSGALG00000012574 2038 0.872 - - - - - - - - - 0.872 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
99. PM20D2 ENSGALG00000015779 1301 0.872 - - - - - - - - - 0.872 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
100. ASB3 ENSGALG00000008176 5422 0.872 - - - - - - - - - 0.872 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]

There are 887 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA