Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CHRNB4

Gene Name Gene ID Reads Annotation
CHRNB4 ENSDARG00000101677 128 cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]










Genes with expression patterns similar to CHRNB4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CHRNB4 ENSDARG00000101677 128 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
2. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.165 0.744 0.839 - - - 0.781 0.801 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
3. slc8a2b ENSDARG00000100592 598 3.083 0.712 0.721 - - - 0.749 0.901 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
4. foxb1a ENSDARG00000089042 101 2.724 0.916 0.885 - - - - 0.923 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
5. RBPMS ENSDARG00000099396 61 2.714 0.865 0.888 - - - - 0.961 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
6. GJD2_1 GJD2_1 3045 2.663 - 0.946 - - - 0.737 0.980 - -
7. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.646 0.833 0.946 - - - - 0.867 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
8. neurod neurod 1189 2.586 0.966 0.905 - - - - 0.715 - -
9. tmie ENSDARG00000069423 305 2.561 0.793 - - - - 0.814 0.954 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
10. rbfox3 rbfox3 1443 2.55 - 0.885 - - - 0.732 0.933 - -
11. gng3 ENSDARG00000009553 2530 2.529 - 0.964 - - - 0.753 0.812 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
12. calca ENSDARG00000056590 150 2.518 0.923 - - - - 0.748 0.847 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
13. cacng3b ENSDARG00000076401 91 2.511 - 0.946 - - - 0.788 0.777 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
14. neflb ENSDARG00000012426 298 2.511 - 0.946 - - - 0.749 0.816 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
15. scn2b ENSDARG00000101713 796 2.495 - 0.959 - - - 0.723 0.813 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
16. PPP2R5B ENSDARG00000054931 213 2.489 0.775 - - - - 0.809 0.905 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
17. dbx2 2971 2.489 - 0.807 - - - 0.819 0.863 - - developing brain homeobox 2
18. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.489 0.852 - - - - 0.706 0.931 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
19. si:ch73-21g5.7 ENSDARG00000093156 9412 2.484 0.784 0.808 - - - - 0.892 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
20. lingo1a ENSDARG00000034165 179 2.482 0.778 0.946 - - - - 0.758 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
21. nes ENSDARG00000088805 2710 2.479 0.815 0.842 - - - - 0.822 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
22. nova2 ENSDARG00000017673 7685 2.467 0.760 0.829 - - - - 0.878 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
23. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 2.445 0.718 0.946 - - - 0.781 - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
24. syt12 ENSDARG00000101776 215 2.445 0.720 - - - - 0.817 0.908 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
25. chga ENSDARG00000008829 1086 2.434 0.919 - - - - 0.725 0.790 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
26. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 2.434 0.842 - - - - 0.744 0.848 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
27. neurog1 ENSDARG00000056130 3924 2.424 0.771 - - - - 0.756 0.897 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
28. nhlh2 ENSDARG00000025495 1860 2.424 0.841 - - - - 0.764 0.819 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
29. nell2b ENSDARG00000062797 854 2.399 0.749 - - - - 0.764 0.886 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
30. SNAP91 ENSDARG00000098809 556 2.398 0.792 0.756 - - - - 0.850 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
31. CABZ01029738.1 CABZ01029738.1 327 2.395 0.770 0.750 - - - - 0.875 - -
32. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.385 0.796 0.746 - - - - 0.843 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
33. dbx1a ENSDARG00000086393 3161 2.383 0.856 - - - - 0.706 0.821 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
34. syngr3a ENSDARG00000014871 405 2.372 - 0.754 - - - 0.727 0.891 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
35. sox2 ENSDARG00000070913 2763 2.37 0.753 0.776 - - - - 0.841 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
36. GLRA3 ENSDARG00000011066 242 2.369 0.725 0.764 - - - - 0.880 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
37. si:ch211-247j9.1 ENSDARG00000079283 217 2.367 0.708 - - - - 0.736 0.923 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
38. porcn ENSDARG00000052558, ENSDARG00000111556 110 2.359 0.708 0.946 - - - 0.705 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
39. clstn1 ENSDARG00000031720 5286 2.358 0.784 - - - - 0.778 0.796 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
40. grin1a ENSDARG00000027828 1327 2.353 0.736 - - - - 0.748 0.869 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
41. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.352 0.799 - - - - 0.779 0.774 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
42. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 2.346 0.747 - - - - 0.720 0.879 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
43. fyna ENSDARG00000011370 1679 2.346 0.724 - - - - 0.747 0.875 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
44. slc18a3a ENSDARG00000006356 1285 2.343 0.760 0.716 - - - - 0.867 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
45. draxin ENSDARG00000058256, ENSDARG00000111676 266 2.289 - 0.800 - - - 0.748 0.741 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
46. cadpsb ENSDARG00000070567 458 2.288 0.766 - - - - 0.721 0.801 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
47. vim ENSDARG00000010008 3551 2.278 0.784 - - - - 0.700 0.794 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
48. nadl1.1 1200 2.277 - 0.769 - - - 0.717 0.791 - - neural adhesion molecule L1.1, transcript variant X1
49. slc35g2b ENSDARG00000045447 378 2.266 0.810 - - - - 0.710 0.746 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
50. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.158 0.735 0.712 - - - 0.711 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
51. si:ch211-152f6.6 si:ch211-152f6.6 278 1.949 - 1.000 - - - - 0.949 - -
52. tmem91 ENSDARG00000068456 81 1.907 - 0.946 - - - - 0.961 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
53. cacna1ab ENSDARG00000006923 12 1.889 - 0.946 - - - - 0.943 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
54. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.884 - 0.945 - - - - 0.939 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
55. amph ENSDARG00000007663 599 1.88 - 0.959 - - - - 0.921 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
56. slc17a6a ENSDARG00000001127 337 1.875 - 0.946 - - - - 0.929 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
57. slc17a6b ENSDARG00000041150 823 1.872 - 0.946 - - - - 0.926 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
58. KCNAB2 KCNAB2 129 1.845 - 0.946 - - - - 0.899 - -
59. scrt2 ENSDARG00000056175 4331 1.831 - 0.901 - - - - 0.930 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
60. scn8aa ENSDARG00000005775 792 1.822 - 0.867 - - - - 0.955 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
61. NTRK3 NTRK3 163 1.811 - 0.946 - - - - 0.865 - -
62. calb1 ENSDARG00000031598 252 1.81 - 0.946 - - - - 0.864 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
63. tmem179 ENSDARG00000013292 343 1.808 - 1.000 - - - 0.808 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
64. prdm12b ENSDARG00000007430 914 1.805 0.940 - - - - - 0.865 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
65. fam219ab ENSDARG00000013813 591 1.805 - 0.946 - - - - 0.859 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
66. gbx1 ENSDARG00000071418 871 1.801 - 0.959 - - - - 0.842 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
67. C21H5orf24 C21H5orf24 333 1.799 - - - - - 0.906 0.893 - -
68. CHL1 CHL1 1553 1.792 - 0.842 - - - - 0.950 - -
69. chat chat 463 1.791 0.880 - - - - - 0.911 - -
70. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1.79 - 0.946 - - - 0.844 - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
71. DKK3 DKK3 12 1.788 0.842 0.946 - - - - - - -
72. stx1b ENSDARG00000000503 2724 1.781 - 0.901 - - - - 0.880 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
73. sv2bb ENSDARG00000060711 196 1.771 - 0.912 - - - - 0.859 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
74. slc32a1 ENSDARG00000059775 1092 1.77 - 0.875 - - - - 0.895 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
75. slc1a2b ENSDARG00000102453 3136 1.758 - 0.821 - - - - 0.937 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
76. KCNS3 KCNS3 82 1.758 - 0.946 - - - - 0.812 - -
77. syt11a ENSDARG00000057913 1145 1.757 - 0.958 - - - - 0.799 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
78. si:ch211-138k19.2 si:ch211-138k19.2 398 1.747 - 0.946 - - - - 0.801 - -
79. CU928222.1 ENSDARG00000097436 1662 1.747 0.903 - - - - - 0.844 - -
80. TUSC5 TUSC5 1436 1.743 - 0.837 - - - - 0.906 - -
81. MAP6 MAP6 643 1.742 - 0.979 - - - - 0.763 - -
82. SEZ6 SEZ6 262 1.738 0.841 - - - - - 0.897 - -
83. cobl ENSDARG00000091006 4 1.734 - 0.946 - - 0.788 - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
84. pou3f2a ENSDARG00000070220 817 1.727 - - - - - 0.800 0.927 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
85. PRKAR2B ENSDARG00000036446 812 1.726 0.731 - - - - - 0.995 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
86. jag1a ENSDARG00000030289 1275 1.724 - 0.881 - - - - 0.843 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
87. fam43b ENSDARG00000070222 92 1.722 - - - - - 0.779 0.943 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
88. CU914780.1 ENSDARG00000114023 105 1.722 - 0.946 - - - - 0.776 - -
89. MAP1A MAP1A 847 1.722 - 0.854 - - - - 0.868 - -
90. snap25a ENSDARG00000020609 4537 1.721 - 0.899 - - - - 0.822 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
91. pdzrn4 ENSDARG00000045687 362 1.718 0.850 - - - - - 0.868 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
92. SV2B SV2B 208 1.717 - 0.959 - - - - 0.758 - -
93. SH2B2 ENSDARG00000090421 245 1.716 0.783 - - - - - 0.933 - - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
94. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.715 - 0.946 - - - 0.769 - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
95. pcp4a ENSDARG00000053130 1024 1.712 0.793 - - - - - 0.919 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
96. rnft2 ENSDARG00000053019 270 1.709 - 0.962 - - - - 0.747 - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
97. lrrc4.1 ENSDARG00000069402 323 1.704 - 0.885 - - - - 0.819 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
98. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.704 - 0.845 - - - - 0.859 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
99. PBRM1 ENSDARG00000003877 225 1.703 0.735 - - - - - 0.968 - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
100. nrarpb ENSDARG00000018958 6225 1.702 0.837 - - - - - 0.865 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]

There are 1831 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA