Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHRNB3

Gene Name Gene ID Reads Annotation
CHRNB3 ENSGALG00000015384 9 cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]











Genes with expression patterns similar to CHRNB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHRNB3 ENSGALG00000015384 9 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
2. CNIH3 ENSGALG00000009308 2 1.69 - - - - 0.913 - - - - 0.777 cornichon family AMPA receptor auxiliary protein 3 [Source:HGNC Symbol;Acc:HGNC:26802]
3. LOC100857745 ENSGALG00000027114 118 1 - - - 1.000 - - - - - - collagen alpha-1(I) chain-like
4. CD8B ENSGALG00000015902 3 1 - - - 1.000 - - - - - - CD8b molecule [Source:NCBI gene;Acc:396175]
5. RNF44 ENSGALG00000026443 3 1 - - - 1.000 - - - - - - ring finger protein 44 [Source:HGNC Symbol;Acc:HGNC:19180]
6. ENSGALG00000022792 ENSGALG00000022792 2 1 - - - 1.000 - - - - - -
7. TMC5 ENSGALG00000006911 12 1 - - - 1.000 - - - - - - transmembrane channel like 5 [Source:HGNC Symbol;Acc:HGNC:22999]
8. ENSGALG00000024369 ENSGALG00000024369 4 1 - - - 1.000 - - - - - -
9. LCT ENSGALG00000012260 21 1 - - - - - 1.000 - - - - lactase [Source:NCBI gene;Acc:424294]
10. TRIM41 ENSGALG00000030569 5 1 - - - 1.000 - - - - - - tripartite motif containing 41 [Source:NCBI gene;Acc:417043]
11. ENSGALG00000005578 ENSGALG00000005578 16 1 - - - 1.000 - - - - - -
12. REM1 ENSGALG00000045602 4 1 - - - - - 1.000 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
13. C15orf60 C15orf60 16 1 - - - - - 1.000 - - - -
14. TRMT61A ENSGALG00000011522 14 1 - - - 1.000 - - - - - - tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
15. ASB15 ENSGALG00000008814 7 1 - - - - - 1.000 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
16. FSCN2 ENSGALG00000023354 13 1 - - - 1.000 - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
17. TRPV6 ENSGALG00000014746 3 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
18. ENSGALG00000026609 ENSGALG00000026609 0 1 - - - 1.000 - - - - - -
19. CTBS ENSGALG00000008780 26 1 - - - 1.000 - - - - - - chitobiase [Source:HGNC Symbol;Acc:HGNC:2496]
20. NPDC1 ENSGALG00000042635 12 1 - - - 1.000 - - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
21. JADE2 ENSGALG00000006424 4 1 - - - 1.000 - - - - - - jade family PHD finger 2 [Source:HGNC Symbol;Acc:HGNC:22984]
22. ENSGALG00000020349 ENSGALG00000020349 10 1 - - - 1.000 - - - - - -
23. PIKFYVE ENSGALG00000008842 3 1 - - - 1.000 - - - - - - phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
24. SNORA63 SNORA63 2 1 - - - 1.000 - - - - - -
25. ENSGALG00000023475 ENSGALG00000023475 19 1 - - - 1.000 - - - - - -
26. SLC51A ENSGALG00000007478 6 1 - - - - - 1.000 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
27. LOC396365 ENSGALG00000027219 7 1 - - - - - 1.000 - - - - preprogastrin
28. CPSF4L ENSGALG00000004441 4 1 - - - - - 1.000 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
29. DFNB31 DFNB31 20 1 - - - 1.000 - - - - - -
30. ENSGALG00000028957 ENSGALG00000028957 7 1 - - - 1.000 - - - - - -
31. CNOT6L ENSGALG00000010333 13 1 - - - 1.000 - - - - - - CCR4-NOT transcription complex subunit 6 like [Source:HGNC Symbol;Acc:HGNC:18042]
32. CSNK1G2 ENSGALG00000027540 30 1 - - - 1.000 - - - - - - casein kinase 1 gamma 2 [Source:HGNC Symbol;Acc:HGNC:2455]
33. EGR4 ENSGALG00000016086 4 1 - - - 1.000 - - - - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
34. SCRG1 ENSGALG00000010755 4 1 - - - 1.000 - - - - - - stimulator of chondrogenesis 1 [Source:NCBI gene;Acc:422563]
35. HSD11B1b ENSGALG00000001369 1 1 - - - - - 1.000 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
36. MYO18B ENSGALG00000045218 7 1 - - - - 1.000 - - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
37. SLC41A2 ENSGALG00000012697 13 1 - - - 1.000 - - - - - - solute carrier family 41 member 2 [Source:NCBI gene;Acc:427913]
38. FAM102B ENSGALG00000001951 0 1 - - - 1.000 - - - - - - family with sequence similarity 102 member B, transcript variant X3
39. TMEM56 ENSGALG00000005580 10 1 - - - - - 1.000 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
40. ENSGALG00000016499 ENSGALG00000016499 4 1 - - - - - 1.000 - - - -
41. C1QTNF4 ENSGALG00000008080 3 1 - - - - - 1.000 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
42. CGA ENSGALG00000015824 1 1 - - - 1.000 - - - - - - glycoprotein hormones, alpha polypeptide [Source:NCBI gene;Acc:421829]
43. MRAP2 ENSGALG00000015838 7 1 - - - - - 1.000 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
44. UNC45A ENSGALG00000029714 158 1 - - - 1.000 - - - - - - unc-45 myosin chaperone A [Source:HGNC Symbol;Acc:HGNC:30594]
45. NFATC2 ENSGALG00000007963 15 1 - - - 1.000 - - - - - - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
46. ENSGALG00000008309 ENSGALG00000008309 7 1 - - - - - 1.000 - - - -
47. TGIF2 ENSGALG00000024081 21 0.996 - - - - - 0.996 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
48. LUZP2 ENSGALG00000030151 585 0.991 - - - - - 0.991 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
49. C14orf159 C14orf159 7 0.986 - - - - - 0.986 - - - -
50. IKBIP ENSGALG00000026284 31 0.985 - - - - - 0.985 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
51. IL1RAP ENSGALG00000007253 6 0.983 - - - - - 0.983 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
52. ENSGALG00000010218 ENSGALG00000010218 12 0.983 - - - - - 0.983 - - - -
53. ENSGALG00000027143 ENSGALG00000027143 23 0.983 - - - - - 0.983 - - - -
54. CD200R1A CD200R1A 105 0.976 - - - - - 0.976 - - - -
55. PPARG ENSGALG00000004974 62 0.973 - - - - - 0.973 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
56. FIBCD1 ENSGALG00000003866 2 0.969 - - - - - 0.969 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
57. NIPAL3 ENSGALG00000004268 37 0.968 - - - - - 0.968 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
58. GHR ENSGALG00000014855 131 0.964 - - - - - 0.964 - - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
59. C20orf96 C20orf96 10 0.964 - - - - - 0.964 - - - -
60. SGK196 SGK196 83 0.963 - - - - - 0.963 - - - -
61. RUNX3 ENSGALG00000043372 43 0.949 - - - - - 0.949 - - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
62. ETAA1 ENSGALG00000027922 1684 0.947 - - - - - 0.947 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
63. CCNJL ENSGALG00000040152 4 0.94 - - - - - 0.940 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
64. CHIC2 ENSGALG00000013931 21 0.938 - - - - - 0.938 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
65. SUFU ENSGALG00000008096 307 0.936 - - - - - 0.936 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
66. CASP7 ENSGALG00000008933 506 0.929 - - - - - 0.929 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
67. MAP3K8 ENSGALG00000007356 188 0.928 - - - - - 0.928 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
68. C15orf26 C15orf26 21 0.925 - - - - - 0.925 - - - -
69. FASTKD1 ENSGALG00000009841 45 0.922 - - - - - 0.922 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
70. PSMD4 ENSGALG00000028505 16 0.917 - - - - - 0.917 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
71. FAM65C 36 0.916 - - - - - 0.916 - - - - family with sequence similarity 65 member C, transcript variant X29
72. S100A9 ENSGALG00000024272 103 0.915 - - - - - 0.915 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
73. ENSGALG00000012332 ENSGALG00000012332 71 0.913 - - - - 0.913 - - - - -
74. COMMD6 ENSGALG00000016922 24 0.913 - - - - 0.913 - - - - - COMM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24015]
75. ANKMY1 ENSGALG00000033920 12 0.913 - - - - 0.913 - - - - - ankyrin repeat and MYND domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20987]
76. PCDH7 ENSGALG00000033883 6 0.913 - - - - - 0.913 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
77. MAPK11 ENSGALG00000040023 15 0.913 - - - - 0.913 - - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
78. LRRTM3 ENSGALG00000002864 29 0.913 - - - - 0.913 - - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
79. MAPK10 ENSGALG00000011109 16 0.913 - - - - 0.913 - - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
80. GLTSCR1L 18 0.913 - - - - 0.913 - - - - - GLTSCR1 like, transcript variant X4
81. TNIP2 ENSGALG00000015666 28 0.913 - - - - 0.913 - - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
82. ERC2 ENSGALG00000005419 24 0.913 - - - - 0.913 - - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
83. DGKI ENSGALG00000012890 3 0.913 - - - - 0.913 - - - - - diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
84. ENSGALG00000007003 ENSGALG00000007003 2 0.913 - - - - 0.913 - - - - -
85. SRD5A2 ENSGALG00000010625 23 0.91 - - - - - 0.910 - - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
86. F8 ENSGALG00000005077 56 0.909 - - - - - 0.909 - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
87. CACNA2D3 ENSGALG00000005400 66 0.904 - - - - - 0.904 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:HGNC Symbol;Acc:HGNC:15460]
88. SCARB1 ENSGALG00000046226 428 0.903 - - - - - 0.903 - - - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
89. UBE2E1 ENSGALG00000011286 5483 0.903 - - - - - 0.903 - - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
90. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.9 - - - - - 0.900 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
91. ARF1 ENSGALG00000005393 364 0.899 - - - - - 0.899 - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
92. RFX3 ENSGALG00000010179 305 0.899 - - - - - 0.899 - - - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
93. TDRD1 ENSGALG00000046180 612 0.898 - - - - - 0.898 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
94. VPS37A ENSGALG00000013646 55 0.895 - - - - 0.895 - - - - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
95. CA8 ENSGALG00000039145 109 0.892 - - - - - 0.892 - - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
96. GDA ENSGALG00000015141 21 0.891 - - - 0.891 - - - - - - guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
97. KIF6 ENSGALG00000010057 84 0.884 - - 0.884 - - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
98. TRPM8 ENSGALG00000004116 2 0.884 - - 0.884 - - - - - - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
99. CD200L ENSGALG00000015395 14 0.884 - - 0.884 - - - - - - - CD200 molecule-like [Source:NCBI gene;Acc:418424]
100. GALK2 ENSGALG00000036201 1016 0.883 - - - - - 0.883 - - - - galactokinase 2 [Source:NCBI gene;Acc:415596]

There are 133 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA