Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHRNA5

Gene Name Gene ID Reads Annotation
CHRNA5 ENSGALG00000003021 83 cholinergic receptor nicotinic alpha 5 subunit [Source:NCBI gene;Acc:386577]











Genes with expression patterns similar to CHRNA5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHRNA5 ENSGALG00000003021 83 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 cholinergic receptor nicotinic alpha 5 subunit [Source:NCBI gene;Acc:386577]
2. NRP2 ENSGALG00000008621 29 1.688 - - - - 0.714 - - 0.974 - - neuropilin 2 [Source:NCBI gene;Acc:374157]
3. SYCP3 ENSGALG00000012766 70 0.947 - - - - - - - 0.947 - - synaptonemal complex protein 3, transcript variant X2
4. EPHB6 ENSGALG00000014749 30 0.903 - - - - - - - 0.903 - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
5. GRIK3 ENSGALG00000002098 111 0.901 - - - - - - - 0.901 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
6. CX3CR1 ENSGALG00000038000 48 0.893 - - - - - - - 0.893 - - C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
7. DNASE1L3 386 0.892 - - - - - - - 0.892 - - deoxyribonuclease 1 like 3
8. EP4 EP4 486 0.89 - - - - - - - 0.890 - -
9. KCTD14 ENSGALG00000017266 31 0.876 - - - - - - - 0.876 - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
10. SGK196 SGK196 83 0.87 - - - - - - - 0.870 - -
11. SH3RF3 ENSGALG00000016810 2169 0.853 - - - - - - - 0.853 - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
12. COL12A1 ENSGALG00000015908 1300 0.847 - - - - - - - 0.847 - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
13. REEP2 ENSGALG00000017365 338 0.835 - - - - - - - 0.835 - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
14. GJC1 ENSGALG00000000997 2279 0.832 - - - - - - - 0.832 - - gap junction protein gamma 1 [Source:NCBI gene;Acc:396501]
15. BEND6 ENSGALG00000016283 319 0.824 - - - - - - - 0.824 - - BEN domain containing 6 [Source:HGNC Symbol;Acc:HGNC:20871]
16. CYP46A1 ENSGALG00000011162 519 0.811 - - - - - - - 0.811 - - cytochrome P450 family 46 subfamily A member 1 [Source:NCBI gene;Acc:423450]
17. PHOSPHO1 ENSGALG00000033683 22 0.811 - - - - - - - - - 0.811 phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
18. SEC24D ENSGALG00000011998 68 0.807 - - - - - - - 0.807 - - SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
19. FAM83B ENSGALG00000016299 17 0.806 - - - - - - - - - 0.806 family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
20. ENSGALG00000026135 ENSGALG00000026135 16 0.805 - - - - - - - - - 0.805
21. IL8 ENSGALG00000026098 16 0.805 - - - - - - - - - 0.805 interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
22. VSTM2A ENSGALG00000041764 2 0.805 - - - - - - - - - 0.805 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
23. LY96 ENSGALG00000032701 18 0.805 - - - - - - - - - 0.805 lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
24. ENSGALG00000014502 ENSGALG00000014502 2 0.805 - - - - - - - - - 0.805
25. GTSF1 ENSGALG00000001109 15 0.805 - - - - - - - - - 0.805 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
26. SLC4A5 ENSGALG00000032146 3 0.805 - - - - - - - - - 0.805 solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
27. NMU ENSGALG00000020151 29 0.805 - - - - - - - - - 0.805 neuromedin U [Source:NCBI gene;Acc:422748]
28. HAAO ENSGALG00000009926 6 0.805 - - - - - - - - - 0.805 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
29. SLC2A1 ENSGALG00000004889 10 0.805 - - - - - - - - - 0.805 solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
30. ENSGALG00000008598 ENSGALG00000008598 2 0.805 - - - - - - - - - 0.805
31. AHR2 ENSGALG00000023742 21 0.805 - - - - - - - - - 0.805 Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
32. KLHL35 ENSGALG00000017332 1 0.805 - - - - - - - - - 0.805 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
33. RHOC ENSGALG00000001569 53 0.805 - - - - - - - - - 0.805 ras homolog family member C [Source:NCBI gene;Acc:395869]
34. CCDC178 6 0.805 - - - - - - - - - 0.805 coiled-coil domain containing 178, transcript variant X3
35. ENSGALG00000026169 ENSGALG00000026169 30 0.805 - - - - - - - - - 0.805
36. CD38 ENSGALG00000014508 3 0.805 - - - - - - - - - 0.805 CD38 molecule [Source:NCBI gene;Acc:422827]
37. GPR83 ENSGALG00000017212 6 0.805 - - - - - - - - - 0.805 G protein-coupled receptor 83 [Source:NCBI gene;Acc:428093]
38. TLR7 ENSGALG00000016590 6 0.805 - - - - - - - - - 0.805 toll like receptor 7 [Source:NCBI gene;Acc:418638]
39. ANKS3 ENSGALG00000000643 2 0.805 - - - - - - - - - 0.805 ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
40. ENSGALG00000019640 ENSGALG00000019640 2 0.805 - - - - - - - - - 0.805
41. MMP23B ENSGALG00000001392 53 0.802 - - - - - - - - - 0.802 matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
42. TRMT6 ENSGALG00000009169 1431 0.798 - - - - - - - 0.798 - - tRNA methyltransferase 6 [Source:NCBI gene;Acc:421313]
43. CACNA2D2 ENSGALG00000038242 2078 0.796 - - - - - - - 0.796 - - calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
44. DMRT1 ENSGALG00000010160 425 0.794 - - - - - - - - - 0.794 doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
45. KRT15 ENSGALG00000019718 64 0.79 - - - - - - - 0.790 - - keratin 15 [Source:NCBI gene;Acc:408040]
46. SLIT3 ENSGALG00000001916 738 0.79 - - - - - - - 0.790 - - slit guidance ligand 3 [Source:NCBI gene;Acc:374173]
47. DCAF10 ENSGALG00000005390 214 0.788 - - - - - - - 0.788 - - DDB1 and CUL4 associated factor 10 [Source:HGNC Symbol;Acc:HGNC:23686]
48. LIMS2 ENSGALG00000001995 41 0.786 - - - - - - - - - 0.786 LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]
49. CHL1 ENSGALG00000037856 1565 0.785 - - - - - - - 0.785 - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
50. SEMA4D ENSGALG00000010697 10 0.781 - - - - - - - - - 0.781 semaphorin 4D [Source:NCBI gene;Acc:396331]
51. GMPR ENSGALG00000012705 30 0.776 - - - - 0.776 - - - - - guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
52. TOR4A ENSGALG00000008623 1364 0.769 - - - - - - - 0.769 - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
53. SYT8 ENSGALG00000006602 369 0.763 - - - - 0.763 - - - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
54. NPRL2 ENSGALG00000002131 7 0.762 - - 0.762 - - - - - - - NPR2-like, GATOR1 complex subunit [Source:NCBI gene;Acc:425132]
55. KIAA1841 ENSGALG00000007825 22 0.76 - - - - - - - - - 0.760 KIAA1841 [Source:NCBI gene;Acc:421196]
56. UCP3 ENSGALG00000017316 30 0.759 - - - - - - - - - 0.759 uncoupling protein 3 [Source:NCBI gene;Acc:373896]
57. ENSGALG00000010911 ENSGALG00000010911 469 0.758 - - - - - - - 0.758 - -
58. SCEL ENSGALG00000027514 313 0.757 - - - - - - - - - 0.757 sciellin, transcript variant X5
59. TMEM170B ENSGALG00000012744 24 0.751 - - - - - - - - - 0.751 transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
60. IRF-4 IRF-4 19 0.749 - - - - - - - 0.749 - -
61. HTR2A ENSGALG00000016992 73 0.748 - - 0.748 - - - - - - - Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
62. ENSGALG00000018499 ENSGALG00000018499 100 0.747 - - - - - - - 0.747 - -
63. CPB1 ENSGALG00000006834 25 0.746 - - - - - - - 0.746 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
64. DHX58 ENSGALG00000023821 15 0.746 - - - - - - - 0.746 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
65. TAGAP ENSGALG00000013747 34 0.746 - - - - - - - 0.746 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
66. UBE3C ENSGALG00000006461 57 0.746 - - - - - - - 0.746 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
67. HMGXB3 ENSGALG00000005770 119 0.746 - - - - - - - 0.746 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
68. KLF11 ENSGALG00000016440 65 0.746 - - - - - - - 0.746 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
69. PIK3C2A ENSGALG00000006121 60 0.744 - - - - 0.744 - - - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha [Source:HGNC Symbol;Acc:HGNC:8971]
70. NDUFV1 ENSGALG00000042809 6222 0.743 - - - - - - - 0.743 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
71. FBXO22 ENSGALG00000039897 377 0.742 - - - - - - - 0.742 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
72. gga-mir-454 ENSGALG00000033526 22 0.741 - - - - - - - 0.741 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
73. PVALB1 PVALB1 267 0.74 - - - - - - - 0.740 - -
74. MASP1 ENSGALG00000007419 141 0.74 - - - - - - - 0.740 - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
75. GIPC3 ENSGALG00000028029 2 0.739 - - - - - - - - - 0.739 GIPC PDZ domain containing family member 3 [Source:HGNC Symbol;Acc:HGNC:18183]
76. HAGH ENSGALG00000005398 168 0.739 - - - - - - - 0.739 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
77. LHX1 ENSGALG00000005409 1 0.739 - - - - - - - - - 0.739 LIM homeobox 1 [Source:NCBI gene;Acc:396381]
78. ENSGALG00000025736 ENSGALG00000025736 3 0.739 - - - - - - - - - 0.739
79. GNG11 ENSGALG00000029899 327 0.738 - - - - - - - 0.738 - - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
80. ENSGALG00000003618 ENSGALG00000003618 12 0.735 - - 0.735 - - - - - - -
81. ENSGALG00000024395 ENSGALG00000024395 1855 0.734 - - - - - - - 0.734 - -
82. BTK ENSGALG00000004958 272 0.734 - - - - - - - 0.734 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
83. BFIV21 BFIV21 30 0.733 - - - - - - - - - 0.733
84. gga-mir-6579-2 ENSGALG00000035346 7 0.733 - - 0.733 - - - - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
85. SH3GL1 ENSGALG00000001121 159 0.733 - - - - - - - 0.733 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
86. ZDHHC20 ENSGALG00000017126 58 0.733 - - - - - - - 0.733 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
87. PSTPIP2 ENSGALG00000040136 37 0.732 - - - - - - - 0.732 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
88. ETNK1 ENSGALG00000013205 18 0.732 - - - - - - - - - 0.732 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
89. SENP7 ENSGALG00000044642 48 0.73 - - - - - - - 0.730 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
90. ENSGALG00000027602 ENSGALG00000027602 20 0.728 - - - - - - - - - 0.728
91. PABPN1L ENSGALG00000006242 3 0.728 - - 0.728 - - - - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
92. RNF17 ENSGALG00000045414 2 0.728 - - - - - - - - - 0.728 ring finger protein 17, transcript variant X2
93. ASMT ENSGALG00000016685 3 0.728 - - 0.728 - - - - - - - acetylserotonin O-methyltransferase [Source:NCBI gene;Acc:396286]
94. AGPAT2 ENSGALG00000023517 21 0.726 - - 0.726 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
95. ENSGALG00000020380 ENSGALG00000020380 31 0.724 - - - - - - 0.724 - - -
96. ENSGALG00000028962 ENSGALG00000028962 7 0.724 - - - - - - - - - 0.724
97. HAND1 ENSGALG00000035104 2351 0.723 - - 0.723 - - - - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
98. ZBTB33 ENSGALG00000008611 15 0.723 - - - - - - - - - 0.723 zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
99. PPP2CA_1 ENSGALG00000006462 3170 0.723 - - - - - - - 0.723 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
100. VIP ENSGALG00000013604 153 0.722 - - - - - - - 0.722 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]

There are 52 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA