Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHRNA3

Gene Name Gene ID Reads Annotation
CHRNA3 ENSGALG00000003014 6 cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]











Genes with expression patterns similar to CHRNA3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHRNA3 ENSGALG00000003014 6 5 - - - 1.000 1.000 1.000 1.000 - - 1.000 cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
2. C3H6ORF138 C3H6ORF138 2 1.931 - - - 1.000 - - - - - 0.931
3. SNORA62 SNORA62 11 1.801 - - - 1.000 - 0.801 - - - -
4. GOLPH3L ENSGALG00000014640 272 1.788 - - - - 0.788 - 1.000 - - - golgi phosphoprotein 3 like, transcript variant X2
5. GLT8D2 ENSGALG00000034078 11 1.509 - - - 0.765 - - - - - 0.744 glycosyltransferase 8 domain containing 2 [Source:NCBI gene;Acc:418085]
6. TPP1 52 1 - - - - - - 1.000 - - - tripeptidyl peptidase 1
7. LRRN2 ENSGALG00000000639 73 1 - - - 1.000 - - - - - - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
8. C1orf172 C1orf172 1 1 - - - - - - 1.000 - - -
9. TRPM6 3 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
10. ABCC8 ENSGALG00000006172 41 1 - - - - - - 1.000 - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
11. SPAG8 2 1 - - - - - - 1.000 - - - sperm associated antigen 8, transcript variant X3
12. ENSGALG00000020719 ENSGALG00000020719 25 1 - - - - - - 1.000 - - -
13. APOAIV APOAIV 5 1 - - - - - - 1.000 - - -
14. NEDD9 ENSGALG00000012747 30 1 - - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
15. KMO ENSGALG00000007503 7 1 - - - - - - 1.000 - - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
16. CLDN16 ENSGALG00000025821 14 1 - - - - 1.000 - - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
17. ENSGALG00000020781 ENSGALG00000020781 5 1 - - - - - - 1.000 - - -
18. IGHMBP2 ENSGALG00000004328 118 1 - - - - 1.000 - - - - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
19. CCDC96 9 1 - - - - - - 1.000 - - - coiled-coil domain containing 96
20. GAL2 GAL2 32 1 - - - - - - 1.000 - - -
21. ZC2HC1A ENSGALG00000035932 17 1 - - - - - - 1.000 - - - zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
22. PTPRS ENSGALG00000004048 70 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type S [Source:NCBI gene;Acc:396375]
23. MMP23B ENSGALG00000001392 53 1 - - - - - - 1.000 - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
24. NFKB2 ENSGALG00000005653 39 1 - - - 1.000 - - - - - - nuclear factor kappa B subunit 2 [Source:NCBI gene;Acc:386574]
25. MC4R ENSGALG00000012907 1 1 - - - - 1.000 - - - - - melanocortin 4 receptor [Source:NCBI gene;Acc:428485]
26. CCNA1 ENSGALG00000017052 23 1 - - - - - - 1.000 - - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
27. ENSGALG00000023265 ENSGALG00000023265 4 1 - - - - - - 1.000 - - -
28. PDE1A ENSGALG00000008885 4 1 - - - - 1.000 - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
29. FAM198A ENSGALG00000037533 7 1 - - - 1.000 - - - - - - family with sequence similarity 198 member A [Source:HGNC Symbol;Acc:HGNC:24485]
30. SUSD1 ENSGALG00000015677 12 1 - - - - - - 1.000 - - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
31. FARP2 ENSGALG00000005788 6 1 - - - - 1.000 - - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
32. TRMT13 ENSGALG00000005290 95 1 - - - - - - 1.000 - - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
33. TRPM3 ENSGALG00000015126 2 1 - - - - 1.000 - - - - - transient receptor potential cation channel subfamily M member 3 [Source:HGNC Symbol;Acc:HGNC:17992]
34. C4A ENSGALG00000017040 5 1 - - - - - - 1.000 - - - complement C4A (Rodgers blood group), transcript variant X2
35. FOXN3 ENSGALG00000010665 18 1 - - - - - - 1.000 - - - forkhead box N3 [Source:HGNC Symbol;Acc:HGNC:1928]
36. AREG ENSGALG00000010866 16 1 - - - - - - 1.000 - - - amphiregulin [Source:NCBI gene;Acc:428752]
37. ENSGALG00000002522 ENSGALG00000002522 21 1 - - - - - - 1.000 - - -
38. NUDT2 ENSGALG00000027295 15 1 - - - - - 1.000 - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
39. CSF1R ENSGALG00000005725 5 1 - - - - - - 1.000 - - - Gallus gallus colony stimulating factor 1 receptor (CSF1R), mRNA. [Source:RefSeq mRNA;Acc:NM_001321517]
40. PPIL3 ENSGALG00000008228 150 1 - - - - - - 1.000 - - - peptidylprolyl isomerase like 3 [Source:NCBI gene;Acc:424075]
41. CAD ENSGALG00000016524 94 1 - - - - - - 1.000 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, transcript variant X2
42. ZFYVE21 ENSGALG00000011534 7 1 - - - - - - 1.000 - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
43. KLRD1 ENSGALG00000014722 27 1 - - - - 1.000 - - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
44. TMEM132D ENSGALG00000002671 12 1 - - - - - - 1.000 - - - transmembrane protein 132D, transcript variant X6
45. ARMC3 ENSGALG00000007864 6 1 - - - 1.000 - - - - - - armadillo repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:30964]
46. MEGF9 3 1 - - - - - - 1.000 - - - multiple EGF-like-domains 9
47. SLC51A ENSGALG00000007478 6 1 - - - - 1.000 - - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
48. VTG1 ENSGALG00000039354 17 1 - - - - 1.000 - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
49. ENSGALG00000000307 ENSGALG00000000307 29 1 - - - 1.000 - - - - - -
50. PTCHD3 ENSGALG00000023347 5 1 - - - 1.000 - - - - - - patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
51. FAM73B FAM73B 2 1 - - - - - - - - - 1.000
52. HTR1A ENSGALG00000014742 2 1 - - - 1.000 - - - - - - 5-hydroxytryptamine receptor 1A [Source:NCBI gene;Acc:431581]
53. MCF2L2 ENSGALG00000008744 8 1 - - - - 1.000 - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
54. KDSR ENSGALG00000012882 57 1 - - - - - - 1.000 - - - 3-ketodihydrosphingosine reductase [Source:NCBI gene;Acc:420902]
55. EFCAB4A EFCAB4A 12 1 - - - - - - 1.000 - - -
56. CKV6.3 CKV6.3 13 1 - - - 1.000 - - - - - -
57. TMEM170B ENSGALG00000012744 24 1 - - - - - - 1.000 - - - transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
58. COL19A1 ENSGALG00000043584 38 1 - - - - 1.000 - - - - - collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
59. P2RY12 ENSGALG00000036470 20 1 - - - - - - 1.000 - - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
60. CRTAC1 ENSGALG00000017378 15 1 - - - - 1.000 - - - - - cartilage acidic protein 1 [Source:NCBI gene;Acc:425346]
61. GCNT7 ENSGALG00000007717 11 1 - - - - - - 1.000 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
62. ANKEF1 ENSGALG00000008996 12 1 - - - - 1.000 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
63. KBTBD8 ENSGALG00000007569 20 1 - - - - - - 1.000 - - - kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
64. MYCT1 ENSGALG00000013603 44 1 - - - - - - 1.000 - - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
65. MBLAC2 ENSGALG00000014649 16 1 - - - 1.000 - - - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
66. DOLK ENSGALG00000026007 6 1 - - - 1.000 - - - - - - dolichol kinase [Source:NCBI gene;Acc:417199]
67. TMEM240 ENSGALG00000035387 14 1 - - - - - - 1.000 - - - transmembrane protein 240 [Source:HGNC Symbol;Acc:HGNC:25186]
68. TDRD1 ENSGALG00000046180 612 1 - - - - - - - - - 1.000 tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
69. LRRC19 ENSGALG00000045028 2 1 - - - - 1.000 - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
70. DDX43 ENSGALG00000015928 6 1 - - - 1.000 - - - - - - DEAD-box helicase 43
71. CEP350 ENSGALG00000003955 184 1 - - - - - - 1.000 - - - centrosomal protein 350 [Source:HGNC Symbol;Acc:HGNC:24238]
72. SUSD4 ENSGALG00000009388 48 0.972 - - - - - 0.972 - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
73. LRRC47 7 0.972 - - - - - 0.972 - - - - leucine rich repeat containing 47
74. ENSGALG00000009227 ENSGALG00000009227 2 0.972 - - - - - 0.972 - - - -
75. GHSR ENSGALG00000027947 24 0.972 - - - - - 0.972 - - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
76. BEGAIN ENSGALG00000011236 35 0.972 - - - - - 0.972 - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
77. OVCH2 ENSGALG00000005318 8 0.972 - - - - - 0.972 - - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
78. ENSGALG00000025883 ENSGALG00000025883 6 0.972 - - - - - 0.972 - - - -
79. C16orf11 C16orf11 2 0.972 - - - - - 0.972 - - - -
80. OCM ENSGALG00000003462 6 0.972 - - - - - 0.972 - - - - oncomodulin [Source:NCBI gene;Acc:386586]
81. ENSGALG00000017269 ENSGALG00000017269 13 0.972 - - - - - 0.972 - - - -
82. POMT1 ENSGALG00000003757 38 0.972 - - - - - 0.972 - - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
83. GPR6 ENSGALG00000015068 2 0.972 - - - - - 0.972 - - - - G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:HGNC:4515]
84. ENSGALG00000016257 ENSGALG00000016257 4 0.972 - - - - - 0.972 - - - -
85. SLC24A1 ENSGALG00000007495 3 0.972 - - - - - 0.972 - - - - solute carrier family 24 member 1 [Source:NCBI gene;Acc:414892]
86. ENSGALG00000020459 ENSGALG00000020459 3 0.972 - - - - - 0.972 - - - -
87. NLGN3 ENSGALG00000005553 4 0.972 - - - - - 0.972 - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
88. ATP12A ENSGALG00000006469 7 0.972 - - - - - 0.972 - - - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
89. U4atac U4atac 23 0.972 - - - - - 0.972 - - - -
90. CRYBG3 7 0.971 - - - - - - - - - 0.971 crystallin beta-gamma domain containing 3, transcript variant X2
91. NIPA1 ENSGALG00000039811 20 0.97 - - - - - 0.970 - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
92. OR14I1 OR14I1 14 0.97 - - - - - 0.970 - - - -
93. CAPN6 ENSGALG00000008006 16 0.969 - - - - - 0.969 - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
94. PROSER1 ENSGALG00000017038 8 0.963 - - - 0.963 - - - - - - proline and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:20291]
95. ZNF22 ZNF22 25 0.962 - - - - - 0.962 - - - -
96. ENSGALG00000023463 ENSGALG00000023463 2 0.96 - - - - - 0.960 - - - -
97. OSTF1 ENSGALG00000017447 39 0.958 - - - - - 0.958 - - - - osteoclast stimulating factor 1 [Source:NCBI gene;Acc:427258]
98. ENSGALG00000018621 ENSGALG00000018621 8 0.957 - - - - - 0.957 - - - -
99. IL20RA ENSGALG00000013869 15 0.957 - - - - - 0.957 - - - - interleukin 20 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6003]
100. SLC20A1 ENSGALG00000013740 40 0.95 - - - - - 0.950 - - - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA