Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHRNA1

Gene Name Gene ID Reads Annotation
CHRNA1 ENSGALG00000009301 2 cholinergic receptor nicotinic alpha 1 subunit [Source:NCBI gene;Acc:395608]











Genes with expression patterns similar to CHRNA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KCNT2 ENSGALG00000041680 36 2 - - - - - - 1.000 - - 1.000 potassium sodium-activated channel subfamily T member 2 [Source:HGNC Symbol;Acc:HGNC:18866]
2. CHRNA1 ENSGALG00000009301 2 2 - - - - - - 1.000 - - 1.000 cholinergic receptor nicotinic alpha 1 subunit [Source:NCBI gene;Acc:395608]
3. WASF3 ENSGALG00000017103 50 1 - - - - - - 1.000 - - - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
4. ADAM20 ENSGALG00000013838, ENSGALG00000021341 5 1 - - - - - - - - - 1.000 ADAM metallopeptidase domain 20 [Source:HGNC Symbol;Acc:HGNC:199]
5. DENND2A ENSGALG00000012857 350 1 - - - - - - 1.000 - - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
6. KCNA2 ENSGALG00000000442 1 1 - - - - - - 1.000 - - - potassium voltage-gated channel subfamily A member 2 [Source:NCBI gene;Acc:395117]
7. ENSGALG00000007855 ENSGALG00000007855 7 1 - - - - - - - - - 1.000
8. CBX2 ENSGALG00000023338 10 1 - - - - - - 1.000 - - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
9. GFAP ENSGALG00000000909 21 1 - - - - - - 1.000 - - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
10. ENSGALG00000019053 ENSGALG00000019053 8 1 - - - - - - 1.000 - - -
11. ABTB2 ENSGALG00000031889 9 1 - - - - - - - - - 1.000 ankyrin repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23842]
12. FLVCR1 ENSGALG00000009807 21 1 - - - - - - 1.000 - - - feline leukemia virus subgroup C cellular receptor 1 [Source:HGNC Symbol;Acc:HGNC:24682]
13. STAT4 ENSGALG00000033087 7 1 - - - - - - - - - 1.000 signal transducer and activator of transcription 4 [Source:NCBI gene;Acc:768406]
14. SLC12A1 ENSGALG00000004945 18 1 - - - - - - - - - 1.000 solute carrier family 12 member 1 [Source:HGNC Symbol;Acc:HGNC:10910]
15. SYT12 ENSGALG00000004306 2 1 - - - - - - - - - 1.000 synaptotagmin 12 [Source:NCBI gene;Acc:422998]
16. ENSGALG00000017322 ENSGALG00000017322 1 1 - - - - - - 1.000 - - -
17. ZHX2 ENSGALG00000043827 13 1 - - - - - - 1.000 - - - zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
18. ENSGALG00000023846 ENSGALG00000023846 3 1 - - - - - - 1.000 - - -
19. TDP1 ENSGALG00000010669 57 1 - - - - - - 1.000 - - - tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:18884]
20. PPEF1 ENSGALG00000016522 3 1 - - - - - - - - - 1.000 protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]
21. STEAP2 ENSGALG00000009017 10 1 - - - - - - - - - 1.000 STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
22. CFUC-TIX CFUC-TIX 1 1 - - - - - - - - - 1.000
23. ENSGALG00000003611 ENSGALG00000003611 22 1 - - - - - - 1.000 - - -
24. ENSGALG00000004511 ENSGALG00000004511 2 1 - - - - - - - - - 1.000
25. ENSGALG00000026112 ENSGALG00000026112 13 1 - - - - - - 1.000 - - -
26. VPREB3 ENSGALG00000021136 1 1 - - - - - - - - - 1.000 V-set pre-B cell surrogate light chain 3 [Source:HGNC Symbol;Acc:HGNC:12710]
27. snoZ39 snoZ39 2 1 - - - - - - - - - 1.000
28. PGAP1 ENSGALG00000030789 3 1 - - - - - - - - - 1.000 post-GPI attachment to proteins 1, transcript variant X3
29. CGA ENSGALG00000015824 1 1 - - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:NCBI gene;Acc:421829]
30. PRUNE2 ENSGALG00000015167 37 1 - - - - - - 1.000 - - - prune homolog 2, transcript variant X5
31. LOC418298 ENSGALG00000014680 23 1 - - - - - - 1.000 - - - solute carrier family 25 member 33-like
32. ATP11C ENSGALG00000006623 163 1 - - - - - - 1.000 - - - ATPase phospholipid transporting 11C [Source:HGNC Symbol;Acc:HGNC:13554]
33. CREB3L3 ENSGALG00000001252 1 1 - - - - - - 1.000 - - - cAMP responsive element binding protein 3 like 3 [Source:HGNC Symbol;Acc:HGNC:18855]
34. HECW2 ENSGALG00000007944 143 1 - - - - - - 1.000 - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:29853]
35. ACPP ENSGALG00000043415 4 1 - - - - - - 1.000 - - - acid phosphatase, prostate, transcript variant X2
36. AMER3 ENSGALG00000041501 5 1 - - - - - - - - - 1.000 APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
37. KCNJ16 ENSGALG00000004373 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
38. MIP-3ALPHA MIP-3ALPHA 14 1 - - - - - - - - - 1.000
39. ENSGALG00000025801 ENSGALG00000025801 5 1 - - - - - - - - - 1.000
40. RAB3C ENSGALG00000014726 10 1 - - - - - - 1.000 - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
41. RYR2 ENSGALG00000010812 95 1 - - - - - - - - - 1.000 ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
42. FSIP1 ENSGALG00000009624 40 1 - - - - - - 1.000 - - - fibrous sheath interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:21674]
43. SLC38A4 ENSGALG00000009730 15 1 - - - - - - 1.000 - - - solute carrier family 38 member 4 [Source:NCBI gene;Acc:417809]
44. GRIN2A ENSGALG00000007278 17 1 - - - - - - 1.000 - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
45. SLC25A25 ENSGALG00000005095 4 1 - - - - - - 1.000 - - - solute carrier family 25 member 25 [Source:HGNC Symbol;Acc:HGNC:20663]
46. FADS1L2 ENSGALG00000020486 1 1 - - - - - - 1.000 - - - fatty acid desaturase 1-like 2, transcript variant X2
47. STEAP1 ENSGALG00000009006 16 1 - - - - - - - - - 1.000 STEAP family member 1
48. STAT1 ENSGALG00000007651 24 1 - - - - - - 1.000 - - - signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:424044]
49. WNT3 ENSGALG00000001079 8 1 - - - - - - - - - 1.000 Wnt family member 3 [Source:NCBI gene;Acc:374142]
50. RPP14 570 1 - - - - - - 1.000 - - - ribonuclease P/MRP subunit p14
51. CD180 ENSGALG00000023411 14 1 - - - - - - 1.000 - - - CD180 molecule [Source:HGNC Symbol;Acc:HGNC:6726]
52. C16orf52 C16orf52 1 1 - - - - - - - - - 1.000
53. ENSGALG00000027059 ENSGALG00000027059 7 1 - - - - - - 1.000 - - -
54. PIWIL1 ENSGALG00000002645 23 1 - - - - - - - - - 1.000 piwi like RNA-mediated gene silencing 1 [Source:NCBI gene;Acc:416804]
55. ENSGALG00000019640 ENSGALG00000019640 2 1 - - - - - - 1.000 - - -
56. CDH7 ENSGALG00000013782 11 0.983 - - - - - - - - - 0.983 cadherin 7 [Source:NCBI gene;Acc:374007]
57. SLC35A3 12 0.936 - - - - - - - - - 0.936 solute carrier family 35 member A3, transcript variant X7
58. ENSGALG00000026913 ENSGALG00000026913 12 0.928 - - - - - - - - - 0.928
59. GNPNAT1 ENSGALG00000012414 32 0.907 - - - - - - 0.907 - - - glucosamine-phosphate N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:19980]
60. CCM2L ENSGALG00000006479 344 0.905 - - - - - - - - - 0.905 CCM2 like scaffold protein [Source:HGNC Symbol;Acc:HGNC:16153]
61. RASD1 ENSGALG00000004860 133 0.892 - - - - - - 0.892 - - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
62. GLRB ENSGALG00000009395 9 0.881 - - - - - - 0.881 - - - glycine receptor beta [Source:HGNC Symbol;Acc:HGNC:4329]
63. ENSGALG00000005227 ENSGALG00000005227 2 0.873 - - - - - - - - - 0.873
64. FAM105B 56 0.873 - - - - - - 0.873 - - - family with sequence similarity 105, member B, transcript variant X18
65. SLC7A10 ENSGALG00000004729 13 0.873 - - - - - - - - - 0.873 solute carrier family 7 member 10 [Source:HGNC Symbol;Acc:HGNC:11058]
66. ENSGALG00000003618 ENSGALG00000003618 12 0.872 - - - - - - - - - 0.872
67. CMYA5 16 0.87 - - - - - - - - - 0.870 cardiomyopathy associated 5
68. PLAGL2 ENSGALG00000006586 3 0.868 - - - - - - - - - 0.868 PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
69. CLDN12 ENSGALG00000009038 16 0.868 - - - - - - - - - 0.868 claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
70. ADAMTS7 7 0.868 - - - - - - - - - 0.868 ADAM metallopeptidase with thrombospondin type 1 motif 7
71. CRB2 ENSGALG00000001169 23 0.851 - - - - - - - - - 0.851 crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
72. ABLIM2 ENSGALG00000043448 48 0.849 - - - - - - 0.849 - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
73. B3GALT6 ENSGALG00000001859 5 0.836 - - - - - - - - - 0.836 beta-1,3-galactosyltransferase 6
74. ENSGALG00000025714 ENSGALG00000025714 6 0.833 - - - - - - - - - 0.833
75. KIAA1147 ENSGALG00000012874 3 0.833 - - - - - - - - - 0.833 KIAA1147 [Source:HGNC Symbol;Acc:HGNC:29472]
76. SMG7 ENSGALG00000004667 707 0.832 - - - - - - 0.832 - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
77. ZP4 ENSGALG00000005462 1 0.828 - - - - - - - - - 0.828 zona pellucida glycoprotein 4 [Source:NCBI gene;Acc:395692]
78. ENSGALG00000015076 ENSGALG00000015076 9 0.824 - - - - - - - - - 0.824
79. TNRC6C ENSGALG00000001725 215 0.813 - - - - - - - - - 0.813 trinucleotide repeat containing 6C [Source:HGNC Symbol;Acc:HGNC:29318]
80. FAM19A1 32 0.811 - - - - - - - - - 0.811 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
81. HOXA1 ENSGALG00000028095 137 0.807 - - - - - - 0.807 - - - homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
82. GPD1L2 ENSGALG00000012061 31 0.804 - - - - - - - - - 0.804 glycerol-3-phosphate dehydrogenase 1-like 2
83. ENSGALG00000019793 ENSGALG00000019793 198 0.802 - - - - - - 0.802 - - -
84. LOC772158 ENSGALG00000023819 17 0.802 - - - - - - 0.802 - - - heat shock protein 30C-like
85. GLRA4 ENSGALG00000004936 23 0.797 - - - - - - - - - 0.797 glycine receptor alpha 4 [Source:HGNC Symbol;Acc:HGNC:31715]
86. PSEN1 ENSGALG00000009320 15 0.797 - - - - - - - - - 0.797 presenilin 1 [Source:NCBI gene;Acc:373977]
87. SNCG1 SNCG1 56 0.794 - - - - - - - - - 0.794
88. FAM181B ENSGALG00000046082 298 0.793 - - - - - - 0.793 - - - family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
89. PRC1 ENSGALG00000012836 20 0.792 - - - - - - - - - 0.792 protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
90. EXOC5 ENSGALG00000012105 23 0.791 - - - - - - - - - 0.791 exocyst complex component 5 [Source:NCBI gene;Acc:423549]
91. ABCG1 ENSGALG00000016164 10 0.79 - - - - - - - - - 0.790 ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
92. SCUBE2 ENSGALG00000032161 63 0.775 - - - - - - - - - 0.775 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
93. GJD2 ENSGALG00000009845 236 0.767 - - - - - - 0.767 - - - gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
94. PITRM1 ENSGALG00000007036 244 0.766 - - - - - - 0.766 - - - pitrilysin metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:17663]
95. DNAH8 ENSGALG00000010116 3 0.766 - - - - - - 0.766 - - - dynein axonemal heavy chain 8 [Source:HGNC Symbol;Acc:HGNC:2952]
96. AJAP1 ENSGALG00000027265 11 0.762 - - - - - - - - - 0.762 adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
97. DDB1 ENSGALG00000042333 275 0.755 - - - - - - - - - 0.755 damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
98. OPRD1 ENSGALG00000036782 48 0.751 - - - - - - 0.751 - - - opioid receptor delta 1, transcript variant X1
99. PIRT 41 0.748 - - - - - - - - - 0.748 phosphoinositide-interacting regulator of transient receptor potential channels
100. AKR AKR 68 0.747 - - - - - - - - - 0.747

There are 17 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA