Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHRAC1

Gene Name Gene ID Reads Annotation
CHRAC1 ENSGALG00000040823 5695 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]











Genes with expression patterns similar to CHRAC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHRAC1 ENSGALG00000040823 5695 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
2. BZW2 ENSGALG00000010809 29213 2.392 - - 0.838 - - - - 0.763 - 0.791 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
3. DCTD ENSGALG00000010674 8396 2.319 - - 0.775 - - - 0.752 0.792 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
4. KIF11 ENSGALG00000030597 5528 2.314 - - 0.763 - - - - 0.718 - 0.833 kinesin family member 11 [Source:NCBI gene;Acc:423809]
5. SLC12A4 ENSGALG00000034179 5674 2.3 - - 0.707 - - - - 0.761 - 0.832 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
6. SRBD1 ENSGALG00000009990 4568 2.257 - - 0.721 - - - 0.754 0.782 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
7. PPFIA1 ENSGALG00000035774 5258 2.254 - - - - - - 0.705 0.747 - 0.802 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
8. RAB5C ENSGALG00000003359 5597 2.166 - - - - - - 0.704 0.717 - 0.745 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
9. TMEM165 ENSGALG00000027886 5468 1.711 - - - - - - - 0.868 - 0.843 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
10. NDUFA12 ENSGALG00000011325 19807 1.665 - - - - - - 0.799 0.866 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
11. MRPL50 ENSGALG00000015543 11649 1.655 - - - - - - 0.784 - - 0.871 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
12. ARL13B ENSGALG00000015412 2968 1.647 - - - - - - 0.804 - - 0.843 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
13. RAB10 ENSGALG00000016535 5272 1.645 - - - - - - 0.797 - - 0.848 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
14. GGA.31975 GGA.31975 8825 1.642 - - - - - - 0.789 - - 0.853
15. UCHL3 ENSGALG00000016921 16208 1.64 - - - - - - 0.745 - - 0.895 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
16. BRD1 ENSGALG00000029379 6047 1.635 - - - - - - - 0.778 - 0.857 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
17. CCND1 ENSGALG00000007555 6715 1.63 - - - - - - - 0.781 - 0.849 cyclin D1 [Source:NCBI gene;Acc:396341]
18. GCSH ENSGALG00000032679 29231 1.626 - - - - - - - 0.841 - 0.785 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
19. ADI1 ENSGALG00000025796 8636 1.623 - - - - - - 0.810 0.813 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
20. CLIC4 ENSGALG00000001262 11497 1.621 - - - - - - 0.770 - - 0.851 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
21. TM4SF18 4553 1.614 - - - - - - 0.838 0.776 - - transmembrane 4 L six family member 18, transcript variant X2
22. SPG21 ENSGALG00000007262 8050 1.609 - - - - - - 0.769 - - 0.840 SPG21, maspardin [Source:NCBI gene;Acc:415526]
23. SUV39H2 ENSGALG00000013920 4360 1.604 - - - - - - - 0.802 - 0.802 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
24. BLMH ENSGALG00000004259 36907 1.599 - - - - - - 0.717 0.882 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
25. MPRIP ENSGALG00000004798 6700 1.599 - - - - - - - 0.747 - 0.852 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
26. LOC426385 ENSGALG00000026301 2703 1.598 - - - - - - 0.765 - - 0.833 serine/threonine kinase 35-like, transcript variant X2
27. STRN3 ENSGALG00000040464 9045 1.597 - - - - - - 0.753 0.844 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
28. GSTAL2 ENSGALG00000028551 4899 1.597 - - - - - - 0.747 - - 0.850 glutathione S-transferase alpha-like 2, transcript variant X4
29. C26H6ORF89 C26H6ORF89 1826 1.593 - - - - - - - 0.769 - 0.824
30. MB21D1 2460 1.59 - - - - - - 0.748 - - 0.842 Mab-21 domain containing 1
31. SPTSSA ENSGALG00000025755 3361 1.588 - - - - - 0.715 - - - 0.873 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
32. ARHGAP21 ENSGALG00000007721 3961 1.587 - - - - - - 0.747 - - 0.840 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
33. MAN2A1 ENSGALG00000000255 4543 1.584 - - - - - - 0.793 - - 0.791 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
34. TXNDC5 ENSGALG00000012784 4678 1.583 - - - - - - 0.773 - - 0.810 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
35. GXYLT1 ENSGALG00000009532 5682 1.581 - - - - - - 0.740 - - 0.841 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
36. NARS ENSGALG00000040506 9506 1.58 - - - - - - - 0.727 - 0.853 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
37. TRRAP ENSGALG00000003596 6032 1.578 - - - - - - - 0.765 - 0.813 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
38. PAK1IP1 ENSGALG00000012724 10907 1.575 - - - - - - - 0.799 - 0.776 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
39. FAM18B1 ENSGALG00000001335 5177 1.572 - - - - - - 0.768 0.804 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
40. MCPH1 ENSGALG00000016332 2097 1.572 - - - - - - - 0.753 - 0.819 microcephalin 1 [Source:NCBI gene;Acc:100125976]
41. DNAJA4 ENSGALG00000036850 6847 1.572 - - - - - - 0.785 0.787 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
42. ETFDH ENSGALG00000009442 7671 1.57 - - 0.767 - - - - - - 0.803 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
43. SPCS1 ENSGALG00000001655 7718 1.57 - - - - - - 0.742 0.828 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
44. TRPC4AP ENSGALG00000003147 3967 1.568 - - - - - - - 0.716 - 0.852 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
45. CLSPN ENSGALG00000002346 2590 1.567 - - - - - - - 0.710 - 0.857 claspin [Source:NCBI gene;Acc:428223]
46. ATR ENSGALG00000002663 4626 1.566 - - - - - - 0.812 0.754 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
47. EVL ENSGALG00000011209 5440 1.565 - - - - - - 0.813 0.752 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
48. NUBPL ENSGALG00000009983 3328 1.563 - - - - - - 0.792 0.771 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
49. GTF3C1 ENSGALG00000007387 5788 1.561 - - - - - - - 0.723 - 0.838 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
50. SMC4 ENSGALG00000009553 15715 1.558 - - - - - - 0.743 - - 0.815 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
51. TMED7 ENSGALG00000028484 21008 1.558 - - - - - - 0.706 - - 0.852 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
52. PTPMT1 ENSGALG00000008091 6160 1.556 - - - - - - 0.753 0.803 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
53. SSR2 ENSGALG00000000764 32190 1.551 - - - - - - - 0.730 - 0.821 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
54. UBFD1 ENSGALG00000006117 5242 1.545 - - - - - - 0.775 0.770 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
55. ERI2 1087 1.545 - - - - - - 0.711 - - 0.834 ERI1 exoribonuclease family member 2, transcript variant X1
56. SHMT1 ENSGALG00000005046 1430 1.541 - - - - - - 0.817 0.724 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
57. SF3B3 ENSGALG00000002531 19397 1.54 - - - - - - 0.770 0.770 - - splicing factor 3b subunit 3, transcript variant X2
58. ZC3HC1 ENSGALG00000008003 2750 1.54 - - - - - - 0.720 - - 0.820 zinc finger C3HC-type containing 1 [Source:NCBI gene;Acc:416679]
59. SPDL1 ENSGALG00000001942 4403 1.537 - - - - - - - 0.714 - 0.823 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
60. CCNG2 ENSGALG00000010347 9122 1.535 - - - - - - 0.713 0.822 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
61. RNF219 ENSGALG00000016911 4458 1.534 - - - - - - - 0.713 - 0.821 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
62. DLG3 ENSGALG00000041900 3016 1.534 - - - - - - - 0.832 0.702 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
63. TMLHE ENSGALG00000007443 3619 1.533 - - - - - - - - 0.708 0.825 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
64. FANCL ENSGALG00000030022 7423 1.532 - - - - - - - 0.786 - 0.746 FA complementation group L [Source:NCBI gene;Acc:421202]
65. ENSGALG00000004711 ENSGALG00000004711 7347 1.532 - - 0.752 - - - - 0.780 - -
66. UBL3 ENSGALG00000017084 7417 1.532 - - - - - - 0.727 - - 0.805 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
67. POMP ENSGALG00000017090 5504 1.529 - - 0.719 - - - - 0.810 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
68. INCENP ENSGALG00000007537 16617 1.528 - - - - - - 0.793 0.735 - - inner centromere protein [Source:NCBI gene;Acc:396270]
69. YIPF3 ENSGALG00000041037 6126 1.527 - - - - - - 0.715 - - 0.812 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
70. UPF2 ENSGALG00000033772 9548 1.525 - - - - - - 0.724 - - 0.801 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
71. SDF2L1 ENSGALG00000031982 6084 1.525 - - - - - - - 0.823 - 0.702 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
72. RAB18 ENSGALG00000007435 3589 1.525 - - - - - - 0.727 0.798 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
73. COX5A ENSGALG00000014121 55281 1.524 - - - - - - 0.721 - - 0.803 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
74. C11H16ORF80 C11H16ORF80 18673 1.521 - - - - - - 0.750 0.771 - -
75. COG6 ENSGALG00000017035 2777 1.518 - - - - - - - 0.732 - 0.786 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
76. SASS6 ENSGALG00000005302 4029 1.516 - - - - - - 0.746 0.770 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
77. TMX4 ENSGALG00000028587 3513 1.516 - - - - - - 0.712 - - 0.804 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
78. FAM177A1 ENSGALG00000010046 4318 1.514 - - - - - - 0.736 0.778 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
79. CDK2AP1 ENSGALG00000034919 5469 1.514 - - - - - - 0.761 0.753 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
80. CHORDC1 ENSGALG00000035461 2439 1.511 - - 0.775 - - - 0.736 - - - cysteine and histidine rich domain containing 1 [Source:NCBI gene;Acc:419009]
81. SSRP1 ENSGALG00000007520 18849 1.509 - - - - - - 0.751 0.758 - - structure specific recognition protein 1 [Source:NCBI gene;Acc:396509]
82. CHMP5 ENSGALG00000013160 13347 1.509 - - - - - - 0.724 - - 0.785 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
83. CPD ENSGALG00000004295 8199 1.507 - - - - - - 0.718 - - 0.789 carboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]
84. ENSGALG00000028938 ENSGALG00000028938 18616 1.505 - - - - - - - 0.735 - 0.770
85. TMX3 ENSGALG00000013757 6387 1.505 - - - - - - 0.764 - - 0.741 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
86. TSTD1 TSTD1 3613 1.502 - - - - - - 0.707 0.795 - -
87. HOXA3 ENSGALG00000027925 4287 1.5 - - - - - - 0.731 0.769 - - homeobox A3 [Source:HGNC Symbol;Acc:HGNC:5104]
88. QSER1 ENSGALG00000012030 4490 1.499 - - - - - - - 0.739 - 0.760 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
89. WASF1 ENSGALG00000015066 5628 1.498 - - - - - - 0.759 - - 0.739 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
90. RRP36 ENSGALG00000028056 7560 1.497 - - - - - - 0.728 0.769 - - ribosomal RNA processing 36
91. MRPL55 5995 1.497 - - - - - - 0.709 0.788 - - mitochondrial ribosomal protein L55
92. DGCR2 ENSGALG00000005891 8405 1.495 - - - - - - 0.721 - - 0.774 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
93. MRPL2 ENSGALG00000008597 16500 1.494 - - - - - - 0.707 0.787 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
94. R3HDM1 ENSGALG00000012246 6580 1.493 - - - - - - 0.753 0.740 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
95. WFDC1 ENSGALG00000005503 6152 1.491 - - - - - - 0.704 - - 0.787 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
96. IREB2 ENSGALG00000035462 10659 1.489 - - - - - - 0.744 0.745 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
97. MYEOV2 MYEOV2 5155 1.487 - - - - - - - 0.725 - 0.762
98. SNAI1 ENSGALG00000008018 3930 1.487 - - - - - - 0.734 - - 0.753 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
99. ENSGALG00000026433 ENSGALG00000026433 14463 1.485 - - - - - - - 0.709 - 0.776
100. POLR1B ENSGALG00000032273 3845 1.485 - - - - - - 0.714 - - 0.771 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]

There are 1172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA