Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHPKCI

Gene Name Gene ID Reads Annotation
CHPKCI CHPKCI 36217











Genes with expression patterns similar to CHPKCI

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHPKCI CHPKCI 36217 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000
2. PRDX1 ENSGALG00000010243 151918 1.67 0.751 - - - - - 0.919 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
3. TPI1 ENSGALG00000014526 43273 1.624 - - 0.707 - - - 0.917 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
4. VDAC3 ENSGALG00000041463 21595 0.95 - - - - - - 0.950 - - - voltage dependent anion channel 3, transcript variant X9
5. TAF12 ENSGALG00000000991 8709 0.942 - - - - - - 0.942 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
6. DDX18 ENSGALG00000012147 12463 0.938 - - - - - - 0.938 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
7. STAG2 ENSGALG00000008482 13629 0.93 - - - - - - 0.930 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
8. TRIB2 ENSGALG00000016457 17641 0.928 - - - - - - 0.928 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
9. LOC407092 ENSGALG00000013809 10706 0.928 - - - - - - 0.928 - - - AD012Z, transcript variant X5
10. UXS1 ENSGALG00000016801 3724 0.927 - - - - - - - 0.927 - - UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
11. CCT5 ENSGALG00000013041 56190 0.927 - - - - - - 0.927 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
12. EZH2 ENSGALG00000043399 15881 0.926 - - - - - - 0.926 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
13. SNX17 ENSGALG00000032468 13519 0.925 - - - - - - 0.925 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
14. ANLN 10479 0.924 - - - - - - 0.924 - - - anillin actin binding protein, transcript variant X2
15. ACTR6 ENSGALG00000040976 31271 0.923 - - - - - - 0.923 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
16. EXOSC7 ENSGALG00000030084 8654 0.919 - - - - - - 0.919 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
17. PSMD13 ENSGALG00000043684 14720 0.916 - - - - - - 0.916 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
18. NOL9 ENSGALG00000028958 23978 0.913 - - - - - - - 0.913 - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
19. MED1 ENSGALG00000001708 9556 0.913 - - - - - - 0.913 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
20. CNBP 42704 0.912 - - - - - - 0.912 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
21. CDC5L ENSGALG00000016704 22893 0.909 - - - - - - 0.909 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
22. ARGLU1 ENSGALG00000016855 25633 0.908 - - - - - - 0.908 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
23. BUB3 ENSGALG00000009681 36055 0.908 - - - - - - 0.908 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
24. MRPS15 ENSGALG00000044433 15356 0.908 - - - - - - 0.908 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
25. MOB4 ENSGALG00000008128 10322 0.907 - - - - - - 0.907 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
26. RPF1 ENSGALG00000008796 9809 0.907 - - - - - - 0.907 - - - ribosome production factor 1 homolog
27. USO1 ENSGALG00000010878 9506 0.905 - - - - - - 0.905 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
28. TRA2A ENSGALG00000010973 37101 0.905 - - - - - - 0.905 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
29. ABRACL ENSGALG00000013826 19445 0.905 - - - - - - 0.905 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
30. MRPS36 ENSGALG00000014789 7584 0.904 - - - - - - 0.904 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
31. LOC424109 ENSGALG00000008738 3932 0.904 - - - - - - 0.904 - - - alpha-aspartyl dipeptidase
32. FHL3 ENSGALG00000035187 9753 0.902 - - - - - - 0.902 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
33. COMMD8 ENSGALG00000026279 13509 0.9 - - - - - - 0.900 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
34. GCAT ENSGALG00000012312 7906 0.9 - - - - - - 0.900 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
35. SAAL1 ENSGALG00000026111 8340 0.9 - - - - - - 0.900 - - - serum amyloid A like 1
36. TTF1 4214 0.899 - - - - - - 0.899 - - - transcription termination factor 1
37. PPP3CB ENSGALG00000005243 8794 0.898 - - - - - - 0.898 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
38. PRDX4 ENSGALG00000016357 32208 0.898 - - - - - - 0.898 - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
39. MYBL2 ENSGALG00000003503 15875 0.897 - - - - - - 0.897 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
40. GALNTL4 GALNTL4 3548 0.896 - - - - - - 0.896 - - -
41. CDC27 ENSGALG00000000596 12014 0.896 - - - - - - 0.896 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
42. GLT8D1 ENSGALG00000001642 4232 0.896 - - - - - - 0.896 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
43. C6H10ORF32 C6H10ORF32 7694 0.896 - - - - - - 0.896 - - -
44. DIS3 ENSGALG00000016930 3696 0.894 - - - - - - 0.894 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
45. MMADHC ENSGALG00000012473 9026 0.893 - - - - - - 0.893 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
46. CCDC90B ENSGALG00000037072 5088 0.893 - - - - - - 0.893 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
47. CTNNBL1 ENSGALG00000006817 6765 0.892 - - - - - - 0.892 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
48. gga-mir-1723 ENSGALG00000025386 6662 0.892 - - - - - - 0.892 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
49. SERBP1 ENSGALG00000011229 30489 0.892 - - - - - - 0.892 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
50. ENSGALG00000006730 ENSGALG00000006730 3695 0.891 - - - - - - 0.891 - - -
51. APITD1 APITD1 11830 0.89 - - - - - - 0.890 - - -
52. SAV1 ENSGALG00000012341 3313 0.89 - - - - - - 0.890 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
53. PRKG1 ENSGALG00000003805 4654 0.89 - - - - - - 0.890 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
54. POLR2C ENSGALG00000001168 10703 0.89 - - - - - - 0.890 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
55. LOC425795 ENSGALG00000027696 2357 0.889 - - - - - - 0.889 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
56. FGD5 ENSGALG00000008546 4031 0.889 - - - - - - 0.889 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
57. ZNF276 ENSGALG00000000513 2410 0.889 - - - - - - 0.889 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
58. RNF13 ENSGALG00000010411 8749 0.889 - - - - - - 0.889 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
59. SNAPIN ENSGALG00000026796 11155 0.888 - - - - - - 0.888 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
60. ATPAF2 ENSGALG00000004926 3393 0.888 - - - - - - 0.888 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
61. CRAC1A CRAC1A 5265 0.887 - - - - - - 0.887 - - -
62. CHL1 ENSGALG00000037856 1565 0.887 - - - - - - 0.887 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
63. MRPS26 ENSGALG00000014118 27422 0.886 - - - - - - 0.886 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
64. LYVE1 ENSGALG00000005643 1230 0.886 - - - - - - 0.886 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
65. DNAJC10 ENSGALG00000008862 3114 0.886 - - - - - - 0.886 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
66. CCAR1 ENSGALG00000004108 13219 0.886 - - - - - - 0.886 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
67. NOB1 ENSGALG00000000693 15442 0.886 - - - - - - 0.886 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
68. TBL1X ENSGALG00000040006 28597 0.886 - - - - - - 0.886 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
69. RPUSD4 ENSGALG00000024326 3788 0.885 - - - - - - 0.885 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
70. LHFPL2 ENSGALG00000004437 500 0.885 - - - - - - 0.885 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
71. LUZP2 ENSGALG00000030151 585 0.885 - - - - - - 0.885 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
72. MAPT ENSGALG00000000625 659 0.885 - - - - - - 0.885 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
73. CSDE1 ENSGALG00000002139 1683 0.885 - - - - - - 0.885 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
74. HDLBP ENSGALG00000005823 24636 0.885 - - - - - - 0.885 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
75. ENSGALG00000013825 ENSGALG00000013825 16473 0.884 - - - - - - 0.884 - - -
76. EPHA3 ENSGALG00000015403 9811 0.883 - - - - - - 0.883 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
77. PELI1 ENSGALG00000008837 11561 0.883 - - - - - - 0.883 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
78. POLB ENSGALG00000040828 7462 0.882 - - - - - - 0.882 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
79. ENSGALG00000000360 ENSGALG00000000360 15320 0.88 - - - - - - 0.880 - - -
80. SPINT1 ENSGALG00000008469 5735 0.877 - - - - - - 0.877 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
81. GSDMA ENSGALG00000013495 1650 0.877 - - - - - - 0.877 - - - gasdermin A [Source:NCBI gene;Acc:426132]
82. GDPD4 ENSGALG00000000690 824 0.877 - - - - - - 0.877 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
83. UBE2N ENSGALG00000030515 32059 0.877 - - - - - - 0.877 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
84. SH3RF3 ENSGALG00000016810 2169 0.875 - - - - - - 0.875 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
85. TP53INP1 ENSGALG00000041353 6890 0.874 - - - - - - 0.874 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
86. MRPS34 ENSGALG00000001792 14262 0.872 - - - - - - 0.872 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
87. ZDHHC6 ENSGALG00000008870 16575 0.87 - - - - - - 0.870 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
88. BTF3 ENSGALG00000013512 33962 0.866 - - - - - - 0.866 - - - basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
89. RPS23 ENSGALG00000015617 430299 0.861 0.861 - - - - - - - - - ribosomal protein S23
90. WLS ENSGALG00000011238 20969 0.861 - - - - - - 0.861 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
91. ST13 ENSGALG00000012007 25670 0.831 - - - - - - 0.831 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
92. SNRPB2 28675 0.83 - - - - - - 0.830 - - - small nuclear ribonucleoprotein polypeptide B2
93. UQCRH ENSGALG00000017380 55734 0.829 0.829 - - - - - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
94. NUDCD2 ENSGALG00000001726 6303 0.825 - - - - - - - 0.825 - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
95. HNRNPU ENSGALG00000010671 56560 0.824 - - - - - - 0.824 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
96. SRP14 ENSGALG00000009592 17828 0.815 0.815 - - - - - - - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
97. GSTAL2 ENSGALG00000028551 4899 0.815 - - - - - - - 0.815 - - glutathione S-transferase alpha-like 2, transcript variant X4
98. ENY2 ENSGALG00000036618 30314 0.809 - - - - - - - 0.809 - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
99. RPS25 ENSGALG00000007699 156127 0.806 - - - - - - 0.806 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
100. RPL29 ENSGALG00000026978 271790 0.802 0.802 - - - - - - - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA