Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHOBF-1

Gene Name Gene ID Reads Annotation
CHOBF-1 CHOBF-1 41











Genes with expression patterns similar to CHOBF-1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHOBF-1 CHOBF-1 41 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. CYP2J19 ENSGALG00000011413 22 1.895 - - - - - 0.937 0.958 - - - cytochrome P450, family 2, subfamily J, polypeptide 19
3. ZNF362 ENSGALG00000026558 11 1.684 - - - - - - 0.958 - - 0.726 zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
4. SCN5A ENSGALG00000006112 137 1.682 - - - - - 0.808 0.874 - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
5. VIT ENSGALG00000010583 16 1.567 - - 0.759 - - 0.808 - - - - vitrin [Source:NCBI gene;Acc:421471]
6. HMGCLL1 ENSGALG00000016294 33 1.538 - - 0.776 0.762 - - - - - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
7. CHRNG ENSGALG00000007906 19 1 - - - - - 1.000 - - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
8. TRIM55 ENSGALG00000041327 1097 0.988 - - - - - 0.988 - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
9. CCDC122 ENSGALG00000016968 5 0.988 - - - - - 0.988 - - - - coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
10. DRD2 ENSGALG00000007794 399 0.958 - - - - - - 0.958 - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
11. CHADL ENSGALG00000011970 42 0.958 - - - - - - 0.958 - - - chondroadherin-like [Source:NCBI gene;Acc:417998]
12. NKX2-5 ENSGALG00000002886 81 0.958 - - - - - - 0.958 - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
13. ENSGALG00000000865 ENSGALG00000000865 46 0.958 - - - - - - 0.958 - - -
14. HPGDS ENSGALG00000010402 343 0.958 - - - - - - 0.958 - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
15. WFIKKN2 ENSGALG00000007367 9 0.958 - - - - - - 0.958 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]
16. SNX18 ENSGALG00000014914 7 0.958 - - - - - - 0.958 - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
17. PLXNB1 23 0.958 - - - - - - 0.958 - - - plexin B1, transcript variant X2
18. TTC9 ENSGALG00000017652 16 0.958 - - - - - - 0.958 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
19. CALB1 ENSGALG00000032282 16 0.942 - - - - - - 0.942 - - - calbindin 1 [Source:NCBI gene;Acc:396519]
20. KIAA0319L ENSGALG00000002445 75 0.932 - - - - - - 0.932 - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
21. ECT2 ENSGALG00000009157 31 0.923 - - - - - 0.923 - - - - epithelial cell transforming 2, transcript variant X7
22. ABRA ENSGALG00000041043 16 0.919 - - - - - - - - - 0.919 actin binding Rho activating protein [Source:HGNC Symbol;Acc:HGNC:30655]
23. VPS37A ENSGALG00000013646 55 0.915 - - - - - 0.915 - - - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
24. SALL3 ENSGALG00000041404 29 0.912 - - - - - - 0.912 - - - spalt like transcription factor 3 [Source:NCBI gene;Acc:395359]
25. VWA1 ENSGALG00000001527 79 0.906 - - - - - - 0.906 - - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
26. NPDC1 ENSGALG00000042635 12 0.902 - - 0.902 - - - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
27. RAD54L ENSGALG00000010356 7 0.9 - - 0.900 - - - - - - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
28. BDH1B ENSGALG00000006976 9 0.899 - - 0.899 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
29. H2B-V H2B-V 24 0.893 - - 0.893 - - - - - - -
30. YES1 ENSGALG00000014860 31 0.892 - - - - - - 0.892 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
31. PDGFRB ENSGALG00000030613 4 0.889 - - 0.889 - - - - - - - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
32. ENSGALG00000012002 ENSGALG00000012002 4 0.889 - - 0.889 - - - - - - -
33. DMB1 ENSGALG00000000162 7 0.889 - - 0.889 - - - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
34. GZMM ENSGALG00000015192 8 0.889 - - 0.889 - - - - - - - granzyme M
35. OSBPL3 ENSGALG00000011007 23 0.885 - - - - - - 0.885 - - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
36. BPIFB8 BPIFB8 49 0.876 - - - - - 0.876 - - - -
37. PGF ENSGALG00000026557 33 0.875 - - 0.875 - - - - - - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
38. LOC418544 ENSGALG00000019175 19 0.871 - - 0.871 - - - - - - - cystathionine beta-synthase-like
39. C2orf62 C2orf62 9 0.868 - - - - - - 0.868 - - -
40. SGSM2 ENSGALG00000005737 95 0.867 - - - - - - 0.867 - - - small G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29026]
41. ZFYVE26 ENSGALG00000028762 18 0.866 - - 0.866 - - - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
42. PTBP3 ENSGALG00000015669 16 0.865 - - 0.865 - - - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
43. PLA2G1B ENSGALG00000020989 2 0.864 - - - - - 0.864 - - - - phospholipase A2 group IB [Source:NCBI gene;Acc:416980]
44. TP53I3 ENSGALG00000016502 178 0.861 - - 0.861 - - - - - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
45. LRRC55 ENSGALG00000029130 21 0.856 - - 0.856 - - - - - - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
46. SH3BP5 ENSGALG00000039337 17 0.852 - - 0.852 - - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
47. UNC93B1 ENSGALG00000039347 342 0.85 - - - - - - 0.850 - - - unc-93 homolog B1 (C. elegans), transcript variant X6
48. MIF4GD ENSGALG00000026715 41 0.85 - - - - - - 0.850 - - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
49. CVG1 CVG1 636 0.847 - - 0.847 - - - - - - -
50. SPRTN ENSGALG00000011065 24 0.844 - - 0.844 - - - - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
51. CD200R1A CD200R1A 105 0.841 - - 0.841 - - - - - - -
52. FXR FXR 52 0.841 - - - - - - 0.841 - - -
53. ENSGALG00000006277 ENSGALG00000006277 284 0.84 - - 0.840 - - - - - - -
54. CAPSL ENSGALG00000013376 22 0.84 - - - - - - 0.840 - - - calcyphosine like [Source:HGNC Symbol;Acc:HGNC:28375]
55. CPM ENSGALG00000009945 140 0.837 - - - - - - - - - 0.837 carboxypeptidase M [Source:NCBI gene;Acc:417843]
56. LETM2 ENSGALG00000036049 19 0.837 - - - - - - - - - 0.837 leucine zipper and EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:14648]
57. TMEM117 ENSGALG00000009596 48 0.836 - - - - - - 0.836 - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
58. SYN1 SYN1 432 0.834 - - 0.834 - - - - - - -
59. SIN3B ENSGALG00000003771 60 0.832 - - 0.832 - - - - - - - SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:HGNC:19354]
60. SIM1 ENSGALG00000015466 111 0.832 - - - - - - 0.832 - - - SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
61. WISP1 ENSGALG00000030115 359 0.831 - - - - - - - - - 0.831 WNT1 inducible signaling pathway protein 1 [Source:NCBI gene;Acc:420322]
62. LRRTM1 ENSGALG00000015967 85 0.831 - - - - - - 0.831 - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
63. KCNK12 ENSGALG00000008960 270 0.831 - - - - - - - 0.831 - - potassium two pore domain channel subfamily K member 12 [Source:HGNC Symbol;Acc:HGNC:6274]
64. MYOG ENSGALG00000000172 460 0.83 - - - - - 0.830 - - - - myogenin [Source:NCBI gene;Acc:374004]
65. ZBTB2 ENSGALG00000012966 112 0.829 - - 0.829 - - - - - - - zinc finger and BTB domain containing 2 [Source:NCBI gene;Acc:421635]
66. ADMP ENSGALG00000037408 24 0.827 - - 0.827 - - - - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
67. ENSGALG00000016572 ENSGALG00000016572 79 0.827 - - - - - - 0.827 - - -
68. PARP3 ENSGALG00000004517 331 0.827 - - - - - - 0.827 - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
69. CRHBP ENSGALG00000014994 8 0.827 - - - - - - 0.827 - - - corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
70. KCTD20 ENSGALG00000000511 298 0.826 - - 0.826 - - - - - - - potassium channel tetramerization domain containing 20 [Source:HGNC Symbol;Acc:HGNC:21052]
71. AJAP1 ENSGALG00000027265 11 0.826 - - - - - 0.826 - - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
72. KIAA1430 KIAA1430 440 0.825 - - 0.825 - - - - - - -
73. TNFIP6 TNFIP6 3024 0.824 - - - - - - - - - 0.824
74. THRSPB 39 0.823 - - - - - 0.823 - - - - thyroid hormone responsive spot 14 beta
75. PAK7 PAK7 136 0.823 - - 0.823 - - - - - - -
76. MPZL1 ENSGALG00000015438 72 0.822 - - 0.822 - - - - - - - myelin protein zero like 1 [Source:HGNC Symbol;Acc:HGNC:7226]
77. RASD1 ENSGALG00000004860 133 0.82 - - 0.820 - - - - - - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
78. GNB4 ENSGALG00000008983 26 0.819 - - 0.819 - - - - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
79. DFFA ENSGALG00000002820 2046 0.818 - - 0.818 - - - - - - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
80. ENSGALG00000003203 ENSGALG00000003203 4 0.814 - - - - - 0.814 - - - -
81. CDO1 ENSGALG00000002358 74 0.808 - - - - - 0.808 - - - - cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]
82. MEP1A ENSGALG00000033033 2 0.808 - - - - - 0.808 - - - - meprin A subunit alpha [Source:NCBI gene;Acc:422060]
83. EXOC6B ENSGALG00000016098 3 0.808 - - - - - 0.808 - - - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
84. SYTL2L ENSGALG00000008326 5 0.808 - - - - - 0.808 - - - - synaptotagmin-like protein 2-like, transcript variant X4
85. LMOD2 ENSGALG00000008805 113 0.808 - - - - - 0.808 - - - - leiomodin 2 [Source:NCBI gene;Acc:417751]
86. SLC26A9 ENSGALG00000000745 1 0.808 - - - - - 0.808 - - - - solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
87. ZC2HC1B 15 0.808 - - - - - 0.808 - - - - zinc finger C2HC-type containing 1B
88. ASB18 ENSGALG00000046564 7 0.808 - - - - - 0.808 - - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
89. FEM1A ENSGALG00000004168 14 0.808 - - - - - 0.808 - - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
90. ENSGALG00000001004 ENSGALG00000001004 17 0.808 - - - - - 0.808 - - - -
91. AVP ENSGALG00000014117 19 0.808 - - - - - 0.808 - - - - arginine vasopressin [Source:NCBI gene;Acc:396101]
92. DSCAM ENSGALG00000016138 16 0.808 - - - - - 0.808 - - - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
93. SNORD95 SNORD95 6 0.808 - - - - - 0.808 - - - -
94. SLC10A2 ENSGALG00000016858 4 0.808 - - - - - 0.808 - - - - Gallus gallus solute carrier family 10 member 2 (SLC10A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319027]
95. ENSGALG00000015429 ENSGALG00000015429 34 0.808 - - - - - 0.808 - - - -
96. ABHD2 ENSGALG00000006689 29 0.808 - - - - - 0.808 - - - - abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18717]
97. DNER ENSGALG00000002958 3 0.808 - - - - - 0.808 - - - - delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
98. USP19 ENSGALG00000006824 44 0.808 - - - - - 0.808 - - - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
99. FAM46D 22 0.808 - - - - - 0.808 - - - - family with sequence similarity 46 member D
100. SLC16A3 ENSGALG00000002728 323 0.808 - - - - - 0.808 - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]

There are 154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA