Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHN1

Gene Name Gene ID Reads Annotation
CHN1 ENSGALG00000009293 6415 chimerin 1 [Source:NCBI gene;Acc:429021]











Genes with expression patterns similar to CHN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHN1 ENSGALG00000009293 6415 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chimerin 1 [Source:NCBI gene;Acc:429021]
2. APIP ENSGALG00000031286 6838 1.739 - - - - - - 0.824 0.915 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
3. SNAPC5 ENSGALG00000007695 4117 1.685 - - 0.758 - - - - 0.927 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
4. ADD1 ENSGALG00000015664 6828 1.671 - - - - - - 0.708 0.963 - - adducin 1 [Source:NCBI gene;Acc:422882]
5. IGF2BP2 ENSGALG00000033195 11421 1.67 - - - - - - 0.771 0.899 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
6. TAX1BP1 ENSGALG00000042822 7728 1.669 - - - - - - 0.788 0.881 - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
7. MB21D1 2460 1.665 - - - - - - 0.705 0.960 - - Mab-21 domain containing 1
8. KXD1 ENSGALG00000036736 3771 1.639 - - - - - - 0.712 0.927 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
9. RBP5 ENSGALG00000014662 31268 1.613 - - - - - - 0.725 0.888 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
10. SHMT1 ENSGALG00000005046 1430 1.586 - - 0.772 - - - 0.814 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
11. TTYH2 ENSGALG00000026940 15628 1.585 - - - - - - 0.720 0.865 - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
12. UBE2D1 ENSGALG00000021213 5876 1.577 - - - - - - 0.859 - - 0.718 ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
13. AGFG1 ENSGALG00000003052 4766 1.574 - - 0.735 - - - 0.839 - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
14. MTCH2 ENSGALG00000036196 15097 1.57 - - - - - - 0.768 0.802 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
15. UBE2B ENSGALG00000032664 6069 1.559 - - 0.746 - - - 0.813 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
16. UBR2 ENSGALG00000009906 7717 1.552 - - 0.774 - - - 0.778 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
17. HSPA4 ENSGALG00000040882 20966 1.537 - - 0.719 - - - 0.818 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
18. GTF2H2 ENSGALG00000002399 2361 1.536 - - 0.769 - - - 0.767 - - - general transcription factor IIH subunit 2, transcript variant X2
19. GATD3A ENSGALG00000016918 24760 1.526 - - - - - - 0.737 0.789 - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
20. CRMP1B CRMP1B 18633 1.507 - - - - - - - 0.775 - 0.732
21. AMBRA1 ENSGALG00000008358 2865 1.504 - - 0.767 - - - 0.737 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
22. MIB1 ENSGALG00000014974 3583 1.498 - - 0.784 - - - 0.714 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
23. FARP1 ENSGALG00000016886 13132 1.489 - - 0.701 - - - 0.788 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
24. MFAP3 ENSGALG00000004040 6951 1.487 - - 0.705 - - - - 0.782 - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
25. DACH1 ENSGALG00000037015 5648 1.473 - - 0.754 - - - 0.719 - - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
26. BRE 10440 1.47 - - 0.767 - - - - 0.703 - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
27. ACTR8 ENSGALG00000005385 3647 1.469 - - 0.746 - - - 0.723 - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
28. ASUN ASUN 17129 1.456 - - 0.702 - - - 0.754 - - -
29. GSPT1 15580 1.453 - - 0.722 - - - 0.731 - - - G1 to S phase transition 1, transcript variant X1
30. BAG2 ENSGALG00000026605 3898 1.439 - - 0.733 - - - 0.706 - - - BCL2 associated athanogene 2
31. UBE2E3 ENSGALG00000020793 9517 1.438 - - 0.730 - - - 0.708 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
32. SEPHS1 ENSGALG00000014575 10701 1.434 - - 0.725 - - - - 0.709 - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
33. PIGK ENSGALG00000009015 7942 1.428 - - 0.727 - - - 0.701 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
34. THOC1 ENSGALG00000014915 5846 1.425 - - 0.711 - - - 0.714 - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
35. CXXC5 ENSGALG00000000884 16351 1.416 - - 0.716 - - - 0.700 - - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
36. PDHA1 ENSGALG00000016430 7070 1.413 - - 0.702 - - - 0.711 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
37. MRPL48 ENSGALG00000017319 9773 0.987 - - - - - - - 0.987 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
38. LGALS1 ENSGALG00000012420 13993 0.986 - - - - - - - 0.986 - - galectin 1 [Source:NCBI gene;Acc:396491]
39. FKBP15 ENSGALG00000008838 3677 0.985 - - - - - - - 0.985 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
40. HDHD2 ENSGALG00000034801 6373 0.983 - - - - - - - 0.983 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
41. RNF10 ENSGALG00000036417 8027 0.982 - - - - - - - 0.982 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
42. RAB6A ENSGALG00000017320 10569 0.974 - - - - - - - 0.974 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
43. IPO9 ENSGALG00000000397 9263 0.967 - - - - - - - 0.967 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
44. NFI1 NFI1 6210 0.964 - - - - - - - 0.964 - -
45. VAPB ENSGALG00000007549 15511 0.964 - - - - - - - 0.964 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
46. H2AFY_1 ENSGALG00000040141 4895 0.963 - - - - - - - 0.963 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
47. CMC1 ENSGALG00000025811 3939 0.961 - - - - - - - 0.961 - - C-X9-C motif containing 1
48. FAS ENSGALG00000006351 461 0.96 - - - - - - - 0.960 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
49. PTPN11 ENSGALG00000004821 2658 0.96 - - - - - - - 0.960 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
50. LIN7C ENSGALG00000012170 5043 0.96 - - - - - - - 0.960 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
51. MTRF1 ENSGALG00000016951 3983 0.96 - - - - - - - 0.960 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
52. DDHD1 ENSGALG00000012426 6068 0.959 - - - - - - - 0.959 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
53. RBM6 ENSGALG00000035578 1690 0.959 - - - - - - - 0.959 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
54. NAA50 ENSGALG00000033889 3551 0.958 - - - - - - - 0.958 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
55. TECPR2 ENSGALG00000011373 1063 0.958 - - - - - - - 0.958 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
56. PGS1 ENSGALG00000007181 3187 0.958 - - - - - - - 0.958 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
57. DENND5B 4077 0.958 - - - - - - - 0.958 - - DENN domain containing 5B, transcript variant X1
58. RIOK1 ENSGALG00000012795 4658 0.958 - - - - - - - 0.958 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
59. PRORSD1P ENSGALG00000034854 2924 0.957 - - - - - - - 0.957 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
60. ADARB1 ENSGALG00000007527 2480 0.957 - - - - - - - 0.957 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
61. SNCAIP ENSGALG00000005330 2425 0.957 - - - - - - - 0.957 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
62. FBXW8 ENSGALG00000008207 1639 0.956 - - - - - - - 0.956 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
63. TMEM100 ENSGALG00000026465 1785 0.956 - - - - - - - 0.956 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
64. RPAP1 ENSGALG00000008624 3522 0.956 - - - - - - - 0.956 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
65. PPT1 ENSGALG00000003936 2540 0.956 - - - - - - - 0.956 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
66. VPS13B 2293 0.956 - - - - - - - 0.956 - - vacuolar protein sorting 13 homolog B
67. ENSGALG00000026930 ENSGALG00000026930 681 0.956 - - - - - - - 0.956 - -
68. EED ENSGALG00000014060 6467 0.956 - - - - - - - 0.956 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
69. FGFRL1 ENSGALG00000037525 1687 0.956 - - - - - - - 0.956 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
70. ANKRD17 ENSGALG00000011642 3192 0.956 - - - - - - - 0.956 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
71. gga-mir-1787 ENSGALG00000025542 1373 0.955 - - - - - - - 0.955 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
72. EPS15 ENSGALG00000010543 1598 0.955 - - - - - - - 0.955 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
73. ZMYM4 ENSGALG00000002499 435 0.955 - - - - - - - 0.955 - - zinc finger MYM-type containing 4, transcript variant X1
74. NFASC ENSGALG00000031776 4264 0.954 - - - - - - - 0.954 - - neurofascin [Source:NCBI gene;Acc:419824]
75. KIAA1432 KIAA1432 1792 0.954 - - - - - - - 0.954 - -
76. PAX-6 PAX-6 2650 0.954 - - - - - - - 0.954 - -
77. DOCK8 481 0.954 - - - - - - - 0.954 - - dedicator of cytokinesis 8, transcript variant X1
78. KNOP1 ENSGALG00000002042 6251 0.953 - - - - - - - 0.953 - - lysine-rich nucleolar protein 1, transcript variant X1
79. KCTD9 ENSGALG00000000275 3455 0.953 - - - - - - - 0.953 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
80. KDM4B ENSGALG00000034592 6711 0.953 - - - - - - - 0.953 - - lysine demethylase 4B, transcript variant X8
81. VRK1 ENSGALG00000011116 4524 0.953 - - - - - - - 0.953 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
82. MAK16 ENSGALG00000001663 7455 0.953 - - - - - - - 0.953 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
83. ACAP2 ENSGALG00000007040 4182 0.952 - - - - - - - 0.952 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
84. C3H2ORF43 C3H2ORF43 5628 0.949 - - - - - - - 0.949 - -
85. RHOT1 ENSGALG00000003397 5149 0.948 - - - - - - - 0.948 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
86. OMA1 ENSGALG00000010861 3328 0.943 - - - - - - - 0.943 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
87. PACSIN3 ENSGALG00000008231 5423 0.942 - - - - - - - 0.942 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
88. MED10 ENSGALG00000028336 9343 0.942 - - - - - - - 0.942 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
89. QARS ENSGALG00000029980 4207 0.94 - - - - - - - 0.940 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
90. FAM192A ENSGALG00000021473 10213 0.937 - - - - - - - 0.937 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
91. LMNB2 ENSGALG00000000470 4364 0.932 - - - - - - - 0.932 - - lamin B2 [Source:NCBI gene;Acc:396222]
92. ACADSB ENSGALG00000041417 7710 0.931 - - - - - - - 0.931 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
93. ATP8B1 ENSGALG00000030834 521 0.925 - - - - - - - 0.925 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
94. UFD1L 12964 0.923 - - - - - - - 0.923 - - ubiquitin fusion degradation 1 like (yeast)
95. ERLIN1 ENSGALG00000003308 6427 0.916 - - - - - - - 0.916 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
96. WBP11 ENSGALG00000011745 11182 0.908 - - - - - - - 0.908 - - WW domain binding protein 11, transcript variant X1
97. STT3B ENSGALG00000011465 11939 0.889 - - - - - - - 0.889 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
98. EIF2B1 ENSGALG00000003259 9491 0.878 - - - - - - 0.878 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
99. TSSC4 ENSGALG00000006530 10413 0.877 - - - - - - - 0.877 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
100. NEK6 ENSGALG00000001118 20333 0.873 - - - - - - 0.873 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]

There are 797 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA