Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHMP6

Gene Name Gene ID Reads Annotation
CHMP6 ENSGALG00000026428 18026 charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]











Genes with expression patterns similar to CHMP6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHMP6 ENSGALG00000026428 18026 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
2. UBE2D1 ENSGALG00000021213 5876 1.783 - - - - - - 0.854 0.929 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
3. SCO1 ENSGALG00000030475 7304 1.759 - - - - - - 0.823 0.936 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
4. RUVBL1 ENSGALG00000005931 9379 1.737 - - - - - - 0.849 0.888 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
5. FXR1 ENSGALG00000008864 10250 1.735 - - - - - - 0.805 0.930 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
6. NDUFB3 ENSGALG00000008239 15511 1.729 - - - - - - 0.776 0.953 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
7. CHMP3 ENSGALG00000015805 11581 1.718 - - - - - - 0.747 0.971 - - charged multivesicular body protein 3
8. ERGIC2 ENSGALG00000007183 12870 1.713 - - - - - - 0.753 0.960 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
9. TBL1XR1 ENSGALG00000039182 16983 1.705 - - - - - - 0.777 0.928 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
10. AHCTF1 ENSGALG00000010630 4809 1.701 - - - - - - 0.739 0.962 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
11. SMDT1 ENSGALG00000011897 9360 1.69 - - - - - - 0.757 0.933 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
12. TMEM59 ENSGALG00000010746 4669 1.687 - - - - - - 0.722 0.965 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
13. SMIM12 ENSGALG00000030261 5860 1.687 - - - - - - 0.721 0.966 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
14. PPCS ENSGALG00000004882 5759 1.68 - - - - - - 0.719 0.961 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
15. MRPL20 ENSGALG00000001542 28764 1.679 - - - - - - 0.814 0.865 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
16. NDUFAF1 ENSGALG00000008587 14779 1.674 - - - - - - 0.730 0.944 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
17. PGAM5 ENSGALG00000002137 7700 1.668 - - - - - - 0.759 0.909 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
18. ATG4C ENSGALG00000010985 6102 1.661 - - - - - - 0.732 0.929 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
19. PIGK ENSGALG00000009015 7942 1.66 - - - - - - 0.715 0.945 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
20. MTERFD1 MTERFD1 3640 1.656 - - - - - - 0.708 0.948 - -
21. MED24 ENSGALG00000013506 5403 1.649 - - - - - - 0.724 0.925 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
22. CDC42BPA ENSGALG00000009158 3926 1.641 - - - - - - 0.737 0.904 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
23. MBD3 ENSGALG00000001101 37265 1.63 - - - - - - 0.767 0.863 - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
24. TSC22D2 ENSGALG00000027591 6594 1.622 - - - - - - 0.701 0.921 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
25. LIMD1 ENSGALG00000035623 7282 1.616 - - - - - - 0.795 0.821 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
26. MARC1 ENSGALG00000009453 5675 1.61 - - - - - - 0.700 0.910 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
27. MED28 ENSGALG00000007138 7686 1.59 - - - - - - 0.764 0.826 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
28. DLD ENSGALG00000007931 11011 1.589 - - - - - - 0.729 0.860 - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
29. SPG21 ENSGALG00000007262 8050 1.584 - - - - - - 0.725 0.859 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
30. HNRNPD ENSGALG00000011184 10686 1.573 - - - - - - 0.715 0.858 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
31. NAA38 ENSGALG00000045783 11229 1.509 - - - - - - 0.777 0.732 - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
32. PDHA1 ENSGALG00000016430 7070 1.484 - - - - - - 0.730 0.754 - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
33. RNPS1 ENSGALG00000009288 13588 1.465 - - - - - - 0.758 0.707 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
34. SLC25A1 ENSGALG00000041760 4744 0.975 - - - - - - - 0.975 - - solute carrier family 25 member 1, transcript variant X2
35. TCEA1 ENSGALG00000015274 2706 0.974 - - - - - - - 0.974 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
36. MRPL18 ENSGALG00000011625 7855 0.971 - - - - - - - 0.971 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
37. SNAP29 ENSGALG00000040128 3581 0.97 - - - - - - - 0.970 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
38. ACSL1 ENSGALG00000010628 2560 0.97 - - - - - - - 0.970 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
39. SRP72 ENSGALG00000011403 13666 0.968 - - - - - - - 0.968 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
40. KDM4A ENSGALG00000010074 7219 0.968 - - - - - - - 0.968 - - lysine demethylase 4A
41. CEP170 ENSGALG00000010733 4177 0.968 - - - - - - - 0.968 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
42. FGFR1OP ENSGALG00000011423 2418 0.965 - - - - - - - 0.965 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
43. VGLL4 ENSGALG00000004937 3762 0.965 - - - - - - - 0.965 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
44. BRCC3 ENSGALG00000005383 4844 0.965 - - - - - - - 0.965 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
45. GOLGB1 ENSGALG00000041494 2376 0.963 - - - - - - - 0.963 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
46. LIG3 ENSGALG00000002288 7198 0.962 - - - - - - - 0.962 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
47. TRIM24 ENSGALG00000012823 2725 0.961 - - - - - - - 0.961 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
48. MAST2 ENSGALG00000010313 2975 0.961 - - - - - - - 0.961 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
49. CAMSAP2 ENSGALG00000002145 6109 0.96 - - - - - - - 0.960 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
50. EFHD1 ENSGALG00000001428 2831 0.96 - - - - - - - 0.960 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
51. LATS2 4776 0.96 - - - - - - - 0.960 - - large tumor suppressor kinase 2
52. KHDRBS1 ENSGALG00000003272 4249 0.96 - - - - - - - 0.960 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
53. SMC6 ENSGALG00000016467 3321 0.96 - - - - - - - 0.960 - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
54. DNAJA1 ENSGALG00000023066 3820 0.958 - - - - - - - 0.958 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
55. NET1 ENSGALG00000008437 9850 0.957 - - - - - - - 0.957 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
56. UCK2 ENSGALG00000003510 2512 0.957 - - - - - - - 0.957 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
57. RNF214 ENSGALG00000036993 3729 0.956 - - - - - - - 0.956 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
58. TRMT44 ENSGALG00000015594 1490 0.956 - - - - - - - 0.956 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
59. WASH1 WASH1 3240 0.956 - - - - - - - 0.956 - -
60. TXNDC5 ENSGALG00000012784 4678 0.955 - - - - - - - 0.955 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
61. BAG3 ENSGALG00000009433 6152 0.955 - - - - - - - 0.955 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
62. RDM1 ENSGALG00000000243 3388 0.954 - - - - - - - 0.954 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
63. PYCR1 ENSGALG00000007300 7987 0.954 - - - - - - - 0.954 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
64. VCAN ENSGALG00000015624 11489 0.954 - - - - - - - 0.954 - - versican [Source:NCBI gene;Acc:395565]
65. PWWP2A ENSGALG00000038202 3686 0.954 - - - - - - - 0.954 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
66. CKAP2 ENSGALG00000017025 25020 0.954 - - - - - - - 0.954 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
67. gga-mir-1772 ENSGALG00000025300 2892 0.954 - - - - - - - 0.954 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
68. FBXO33 ENSGALG00000010192 2917 0.953 - - - - - - - 0.953 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
69. ZC3H3 ENSGALG00000043265 1638 0.952 - - - - - - - 0.952 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
70. ARFRP1 ENSGALG00000006101 3743 0.952 - - - - - - - 0.952 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
71. EDEM1 ENSGALG00000008320 3117 0.952 - - - - - - - 0.952 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
72. CARS2 ENSGALG00000016847 3814 0.952 - - - - - - - 0.952 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
73. BTG1L ENSGALG00000004676 2293 0.952 - - - - - - - 0.952 - - protein BTG1-like
74. REV3L ENSGALG00000015033 1917 0.951 - - - - - - - 0.951 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
75. DCTN5 ENSGALG00000006088 3113 0.951 - - - - - - - 0.951 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
76. SMARCC1 ENSGALG00000032642 4842 0.95 - - - - - - - 0.950 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
77. CHAF1A ENSGALG00000001126 6506 0.949 - - - - - - - 0.949 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
78. MAPK9 ENSGALG00000039099 5467 0.949 - - - - - - - 0.949 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
79. MTMR9 ENSGALG00000016649 2055 0.949 - - - - - - - 0.949 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
80. PEO1 PEO1 6747 0.947 - - - - - - - 0.947 - -
81. ARHGEF4 ENSGALG00000002193 558 0.947 - - - - - - - 0.947 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
82. STX18 ENSGALG00000015012 1489 0.947 - - - - - - - 0.947 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
83. TFEB ENSGALG00000039878 881 0.947 - - - - - - - 0.947 - - transcription factor EB [Source:NCBI gene;Acc:419922]
84. DUSP14 ENSGALG00000027641 3662 0.947 - - - - - - - 0.947 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
85. APOOL ENSGALG00000006978 1953 0.946 - - - - - - - 0.946 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
86. TUBAL3 ENSGALG00000008444 2979 0.946 - - - - - - - 0.946 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
87. ABCA3 ENSGALG00000037837 1606 0.946 - - - - - - - 0.946 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
88. NR2F2 ENSGALG00000007000 4911 0.945 - - - - - - - 0.945 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
89. MRPS23 ENSGALG00000005559 10360 0.945 - - - - - - - 0.945 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
90. GLG1 ENSGALG00000039818 6221 0.945 - - - - - - - 0.945 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
91. ADIPOR1 ENSGALG00000000094 1862 0.944 - - - - - - - 0.944 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
92. RGS17 ENSGALG00000026034 707 0.944 - - - - - - - 0.944 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
93. NEMF ENSGALG00000012263 2250 0.944 - - - - - - - 0.944 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
94. AMMECR1L ENSGALG00000026728 2134 0.944 - - - - - - - 0.944 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
95. CCDC61 ENSGALG00000006714 8066 0.944 - - - - - - - 0.944 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
96. BCLAF1 ENSGALG00000013935 7596 0.943 - - - - - - - 0.943 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
97. UBAC2 ENSGALG00000016880 1343 0.943 - - - - - - - 0.943 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
98. NSRP1 ENSGALG00000004186 1683 0.943 - - - - - - - 0.943 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
99. gga-mir-1306 ENSGALG00000025271 1231 0.942 - - - - - - - 0.942 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
100. PKP4 ENSGALG00000012561 3087 0.942 - - - - - - - 0.942 - - plakophilin 4 [Source:NCBI gene;Acc:424328]

There are 840 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA