Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHMP5

Gene Name Gene ID Reads Annotation
CHMP5 ENSGALG00000013160 13347 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]











Genes with expression patterns similar to CHMP5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHMP5 ENSGALG00000013160 13347 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
2. CENPP ENSGALG00000004687 6707 2.603 - - - - 0.932 - 0.718 0.953 - - centromere protein P [Source:NCBI gene;Acc:415952]
3. NOC4L ENSGALG00000002272 9644 2.415 - - - - - - 0.730 0.969 - 0.716 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
4. CASP3 ENSGALG00000010638 11572 1.871 - - - - - - 0.875 0.996 - - caspase 3 [Source:NCBI gene;Acc:395476]
5. KIF11 ENSGALG00000030597 5528 1.837 - - - - 0.940 - - - - 0.897 kinesin family member 11 [Source:NCBI gene;Acc:423809]
6. NARS ENSGALG00000040506 9506 1.819 - - - - 0.918 - - - - 0.901 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
7. ASAP2 ENSGALG00000016419 1393 1.811 - - - - 0.930 - - - - 0.881 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
8. LOC426385 ENSGALG00000026301 2703 1.785 - - - - 0.935 - - - - 0.850 serine/threonine kinase 35-like, transcript variant X2
9. MRPS17 ENSGALG00000002379 30243 1.775 - - - - - - 0.797 0.978 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
10. HBXIP HBXIP 8637 1.773 - - - - - - - 0.997 - 0.776
11. RHOT1 ENSGALG00000003397 5149 1.771 - - - - 0.901 - - - - 0.870 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
12. SELT SELT 25524 1.762 - - - - 0.915 - - 0.847 - -
13. PRDM4 ENSGALG00000012619 876 1.761 - - - - 0.927 - - - - 0.834 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
14. PRCC ENSGALG00000040696 9346 1.751 - - - - 0.934 - 0.817 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
15. PSMD3 ENSGALG00000033162 25615 1.746 - - - - 0.927 - 0.819 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
16. UPF3B ENSGALG00000008618 12350 1.727 - - - - 0.949 - 0.778 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
17. CPSF2 ENSGALG00000010783 5236 1.723 - - - - - - 0.848 - - 0.875 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
18. TMTC2 ENSGALG00000010975 7040 1.721 - - - - - - 0.724 0.997 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
19. ZFR ENSGALG00000003235 8466 1.717 - - - - - - 0.850 - - 0.867 zinc finger RNA binding protein, transcript variant X3
20. CARKD CARKD 2914 1.716 - - - - - - - 0.997 0.719 -
21. RAD23B ENSGALG00000015540 10828 1.708 - - - - 0.915 - 0.793 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
22. NEK6 ENSGALG00000001118 20333 1.706 - - - - 0.931 - 0.775 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
23. SPEN ENSGALG00000036932 9688 1.702 - - - - 0.916 - 0.786 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
24. TAF3 ENSGALG00000006731 15569 1.695 - - - - 0.934 - 0.761 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
25. RNF219 ENSGALG00000016911 4458 1.692 - - - - - - 0.811 - - 0.881 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
26. HARS ENSGALG00000035080 11602 1.69 - - - - 0.958 - 0.732 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
27. RPL22 ENSGALG00000000719 74238 1.689 - - - - 0.924 - - - - 0.765 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
28. NDUFA4 ENSGALG00000025999 53323 1.683 - - - - - - - 0.832 - 0.851 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
29. CETN1 ENSGALG00000026741 7243 1.681 - - - - - - 0.809 - - 0.872 centrin 1 [Source:NCBI gene;Acc:422668]
30. HSF2 ENSGALG00000038420 5259 1.672 - - - - 0.943 - 0.729 - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
31. GSPT1 15580 1.663 - - - - 0.864 - 0.799 - - - G1 to S phase transition 1, transcript variant X1
32. G3BP1 ENSGALG00000004160 36795 1.655 - - - - 0.886 - 0.769 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
33. PNRC2 ENSGALG00000004122 19228 1.641 - - - - - - 0.801 - - 0.840 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
34. SRGAP1 ENSGALG00000009825 6753 1.641 - - - - 0.933 - 0.708 - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
35. RAD21 ENSGALG00000029523 25658 1.641 - - - - - - 0.860 - 0.781 - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
36. CDCA7 ENSGALG00000040833 7484 1.638 - - - - 0.926 - - - - 0.712 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
37. PTP4A2 ENSGALG00000003265 24826 1.637 - - - - - - 0.835 - - 0.802 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
38. DLD ENSGALG00000007931 11011 1.634 - - - - 0.933 - 0.701 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
39. SUV39H2 ENSGALG00000013920 4360 1.632 - - - - - - 0.766 - - 0.866 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
40. UTP11L UTP11L 11927 1.626 - - - - - - 0.726 0.900 - -
41. C1orf198 ENSGALG00000026600 5651 1.626 - - - - - - 0.743 - - 0.883 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
42. DTWD2 ENSGALG00000002250 1604 1.626 - - - - - - - - 0.801 0.825 DTW domain containing 2 [Source:NCBI gene;Acc:427386]
43. CLIC4 ENSGALG00000001262 11497 1.622 - - - - - - 0.748 - - 0.874 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
44. ACO2 ENSGALG00000011950 30387 1.621 - - - - - - 0.754 - - 0.867 aconitase 2 [Source:NCBI gene;Acc:374009]
45. CEP78 ENSGALG00000015179 5227 1.616 - - - - 0.897 - 0.719 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
46. SVIL ENSGALG00000007331 12032 1.615 - - - - 0.790 - - - - 0.825 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
47. GABARAPL2 ENSGALG00000003208 9195 1.611 - - - - 0.883 - 0.728 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
48. SMC4 ENSGALG00000009553 15715 1.61 - - - - - - 0.741 - - 0.869 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
49. MPRIP ENSGALG00000004798 6700 1.609 - - - - - - 0.719 - - 0.890 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
50. TMLHE ENSGALG00000007443 3619 1.608 - - - - - - - - 0.760 0.848 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
51. MRPL50 ENSGALG00000015543 11649 1.606 - - - - - - 0.734 - - 0.872 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
52. UMPS ENSGALG00000011770 11331 1.602 - - - - 0.892 - 0.710 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
53. USMG5 ENSGALG00000034645 33263 1.589 - - - - 0.878 - - - - 0.711 up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
54. BASP1 ENSGALG00000012952 19549 1.589 - - - - 0.881 - 0.708 - - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
55. ZADH2 ENSGALG00000022882 11790 1.582 - - - - 0.791 - 0.791 - - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
56. GXYLT1 ENSGALG00000009532 5682 1.58 - - - - - - 0.724 - - 0.856 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
57. ETFDH ENSGALG00000009442 7671 1.578 - - 0.801 - - - - - - 0.777 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
58. UCHL3 ENSGALG00000016921 16208 1.577 - - - - - - 0.709 - - 0.868 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
59. UFD1L 12964 1.573 - - - - - - 0.814 - - 0.759 ubiquitin fusion degradation 1 like (yeast)
60. ENSGALG00000009044 ENSGALG00000009044 14492 1.566 - - - - - - 0.706 - - 0.860
61. UBE2E3 ENSGALG00000020793 9517 1.554 - - - - - - 0.841 - - 0.713 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
62. TMEM115 ENSGALG00000026965 13050 1.552 - - - - - - 0.774 - - 0.778 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
63. MTX2 ENSGALG00000009264 17304 1.551 - - 0.708 - 0.843 - - - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
64. TMED7 ENSGALG00000028484 21008 1.549 - - - - - - 0.704 - - 0.845 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
65. TCOF1 ENSGALG00000005535 24554 1.547 - - - - - - - 0.731 - 0.816 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
66. FNBP1L ENSGALG00000005850 9219 1.547 - - - - - - 0.722 - - 0.825 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
67. SDF2L1 ENSGALG00000031982 6084 1.547 - - - - - - 0.819 - - 0.728 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
68. LEPROT ENSGALG00000011047 7132 1.541 - - - - - - 0.836 - - 0.705 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
69. PPFIA1 ENSGALG00000035774 5258 1.54 - - - - - - 0.705 - - 0.835 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
70. EIF3B ENSGALG00000040999 49971 1.54 - - - - 0.810 - 0.730 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
71. GGA.31975 GGA.31975 8825 1.539 - - - - - - 0.765 - - 0.774
72. EBNA1BP2 ENSGALG00000009045 17453 1.533 - - - - - - 0.716 0.817 - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
73. DGCR2 ENSGALG00000005891 8405 1.526 - - - - - - 0.739 - - 0.787 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
74. RAB10 ENSGALG00000016535 5272 1.526 - - - - - - 0.757 - - 0.769 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
75. NDUFAF1 ENSGALG00000008587 14779 1.526 - - - - - - 0.734 - - 0.792 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
76. SCP2 ENSGALG00000010652 19563 1.522 - - - - - - 0.816 - - 0.706 sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
77. ECI2 ENSGALG00000012809 3692 1.516 - - - - - - 0.715 - - 0.801 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
78. TRRAP ENSGALG00000003596 6032 1.515 - - - - - - - - 0.770 0.745 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
79. CSNK2A1 ENSGALG00000006197 41409 1.512 - - - - 0.725 - 0.787 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
80. MAN2A1 ENSGALG00000000255 4543 1.511 - - - - - - 0.719 - - 0.792 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
81. DSP ENSGALG00000012790 17884 1.509 - - - - 0.725 - - - 0.784 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
82. CHRAC1 ENSGALG00000040823 5695 1.509 - - - - - - 0.724 - - 0.785 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
83. WASF1 ENSGALG00000015066 5628 1.508 - - - - - - 0.711 - - 0.797 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
84. TIAR TIAR 2471 1.507 - - - - - - - - 0.775 0.732
85. RPF2 ENSGALG00000037087 12788 1.503 - - - - - - 0.702 - - 0.801 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
86. HNRNPLL ENSGALG00000008504 14719 1.503 - - - - - - 0.740 - - 0.763 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
87. HNRNPD ENSGALG00000011184 10686 1.494 - - - - - - 0.718 - - 0.776 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
88. LSM5 ENSGALG00000041625 22307 1.494 - - - - 0.787 - 0.707 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
89. YWHAZ ENSGALG00000031387 84985 1.492 - - - - 0.704 - 0.788 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
90. TMX3 ENSGALG00000013757 6387 1.488 - - - - - - 0.758 - - 0.730 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
91. GPS1 ENSGALG00000002827 8433 1.485 - - - - - - 0.722 - - 0.763 G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
92. SNW1 ENSGALG00000010501 17767 1.483 - - - - - - - - 0.765 0.718 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
93. CLNS1A ENSGALG00000008574 25675 1.479 - - - - - - 0.777 0.702 - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
94. COPS2 ENSGALG00000000404 8980 1.479 - - - - - - 0.765 - - 0.714 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
95. AN1ZNF5L ENSGALG00000014589 21148 1.476 - - - - - - 0.733 0.743 - - AN1-type zinc finger protein 5-like, transcript variant X2
96. RAB5C ENSGALG00000003359 5597 1.474 - - - - - - 0.725 - - 0.749 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
97. COX5A ENSGALG00000014121 55281 1.471 - - - - - - 0.722 - - 0.749 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
98. UPF2 ENSGALG00000033772 9548 1.468 - - - - - - 0.751 - - 0.717 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
99. ERBB2IP ERBB2IP 5800 1.458 - - - - - - 0.707 - - 0.751
100. CNI CNI 18453 1.453 - - - - - - 0.722 - - 0.731

There are 1084 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA