Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHMP4B

Gene Name Gene ID Reads Annotation
CHMP4B ENSGALG00000002095 17422 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]











Genes with expression patterns similar to CHMP4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHMP4B ENSGALG00000002095 17422 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
2. TDP2 ENSGALG00000013637 6595 2.485 - - 0.705 - - - 0.993 0.787 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
3. BRT-1 BRT-1 26083 1.85 - - - - - - 0.997 - - 0.853
4. ENSGALG00000001861 ENSGALG00000001861 10150 1.772 - - - - - - 0.991 0.781 - -
5. AP2M1 ENSGALG00000008432 16249 1.718 - - 0.722 - - - 0.996 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
6. DNMT3B ENSGALG00000041461 12959 1.699 - - - - - - 0.990 0.709 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
7. MAEA ENSGALG00000013310 13230 1.694 - - 0.820 - - - - 0.874 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
8. MOB3A ENSGALG00000031729 9690 1.693 - - - - - - - 0.837 - 0.856 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
9. CUL5 ENSGALG00000017165 2480 1.644 - - 0.756 - - - - - - 0.888 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
10. URM1 ENSGALG00000004971 17880 1.631 - - 0.796 - - - - 0.835 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
11. TXN2 ENSGALG00000012532 12518 1.629 - - 0.747 - - - - 0.882 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
12. SQLE ENSGALG00000036915 4172 1.613 - - 0.775 - - - - - - 0.838 squalene epoxidase [Source:NCBI gene;Acc:420335]
13. PSMD13 ENSGALG00000043684 14720 1.61 - - 0.807 - - - - 0.803 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
14. CNI CNI 18453 1.609 - - - - - - - 0.898 - 0.711
15. CBLL1 ENSGALG00000038981 6725 1.602 - - 0.815 - - - - 0.787 - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
16. PANK1 ENSGALG00000006431 2910 1.595 - - 0.797 - - - - 0.798 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
17. HYAL3 ENSGALG00000029000 712 1.587 - - 0.830 - - - - - - 0.757 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
18. COX17 ENSGALG00000014981 5646 1.587 - - - - - - - 0.766 - 0.821 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
19. SSR2 ENSGALG00000000764 32190 1.581 - - - - - - - 0.782 - 0.799 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
20. ATP6V0C ENSGALG00000009229 125870 1.58 - - 0.824 - - - - - - 0.756 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
21. SLC35B1 ENSGALG00000035057 10683 1.572 - - - - - - - 0.755 - 0.817 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
22. M6PR ENSGALG00000031681 9442 1.556 - - - - - - - 0.762 - 0.794 mannose-6-phosphate receptor, cation dependent, transcript variant X3
23. WHSC1 1712 1.552 - - 0.807 - - - - - - 0.745 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
24. AMFR ENSGALG00000003107 6560 1.547 - - 0.825 - - - - 0.722 - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
25. MYO5A ENSGALG00000031987 2469 1.538 - - 0.714 - - - - - - 0.824 myosin VA [Source:NCBI gene;Acc:396237]
26. POLR2B ENSGALG00000011387 4864 1.533 - - - - - - - 0.731 - 0.802 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
27. AMBRA1 ENSGALG00000008358 2865 1.532 - - 0.830 - - - - 0.702 - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
28. LPCAT3 ENSGALG00000014570 7919 1.527 - - 0.760 - - - - 0.767 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
29. HOXA5 ENSGALG00000025929 6231 1.526 - - - - - - - 0.741 - 0.785 homeobox A5 [Source:NCBI gene;Acc:100858404]
30. SNRB SNRB 4477 1.517 - - 0.795 - - - - 0.722 - -
31. PRTG ENSGALG00000037336 34665 1.516 - - 0.796 - - - - - - 0.720 protogenin [Source:NCBI gene;Acc:415407]
32. PRKACB ENSGALG00000028530 12506 1.514 - - 0.783 - - - - 0.731 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
33. ADIPOR2 ENSGALG00000035533 6523 1.514 - - 0.798 - - - - 0.716 - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
34. FTD FTD 3041 1.513 - - 0.801 - - - - 0.712 - -
35. SIAH1 ENSGALG00000003916 6682 1.511 - - - - - - 0.806 0.705 - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
36. SMC4 ENSGALG00000009553 15715 1.509 - - 0.805 - - - - - - 0.704 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
37. LSM6 ENSGALG00000009985 18582 1.503 - - 0.792 - - - - - - 0.711 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
38. NARS ENSGALG00000040506 9506 1.501 - - - - - - - 0.785 - 0.716 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
39. CCNA2 ENSGALG00000011881 2574 1.5 - - 0.795 - - - - - - 0.705 cyclin A2 [Source:NCBI gene;Acc:396172]
40. NR2C1 ENSGALG00000011327 5109 1.491 - - 0.702 - - - - 0.789 - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
41. WSB2 ENSGALG00000008151 13246 1.488 - - 0.724 - - - - 0.764 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
42. TIMMDC1 ENSGALG00000024480 9337 1.486 - - 0.723 - - - - 0.763 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
43. NDC1 ENSGALG00000031606 3094 1.486 - - 0.782 - - - - 0.704 - - NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
44. ZFR ENSGALG00000003235 8466 1.486 - - - - - - - 0.786 - 0.700 zinc finger RNA binding protein, transcript variant X3
45. HSPE1 ENSGALG00000009070 87567 1.478 - - 0.764 - - - - - - 0.714 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
46. RPL26 RPL26 343071 1.474 - - 0.727 - - - - - - 0.747
47. EBAG9 ENSGALG00000036293 10058 1.47 - - - - - - - 0.756 - 0.714 estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
48. SPDL1 ENSGALG00000001942 4403 1.447 - - 0.724 - - - - - - 0.723 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
49. AGFG1 ENSGALG00000003052 4766 1.446 - - 0.743 - - - - 0.703 - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
50. USP7 ENSGALG00000007307 2973 1.444 - - - - - - - 0.714 - 0.730 ubiquitin specific peptidase 7 [Source:NCBI gene;Acc:395126]
51. ATG16L1 ENSGALG00000001619 3562 1.444 - - - - - - - 0.705 - 0.739 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
52. EMILIN2 ENSGALG00000032997 2460 1.429 - - 0.723 - - - - 0.706 - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
53. FBXO38 ENSGALG00000038627 2658 1.426 - - - - - - - 0.706 - 0.720 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
54. KLHL21 ENSGALG00000035211 6145 1.418 - - 0.706 - - - - 0.712 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
55. TRAF3IP1 ENSGALG00000004236 7094 1.407 - - 0.702 - - - - 0.705 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
56. gga-mir-762 ENSGALG00000025437 24823 0.996 - - - - - - 0.996 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
57. MAPKAPK2 ENSGALG00000000883 6174 0.994 - - - - - - 0.994 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
58. HSPA14 ENSGALG00000035201 7372 0.994 - - - - - - 0.994 - - - heat shock protein family A (Hsp70) member 14
59. C1H21ORF33 ENSGALG00000019171 8910 0.993 - - - - - - 0.993 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
60. ARCN1 ENSGALG00000007430 21499 0.993 - - - - - - 0.993 - - - archain 1 [Source:NCBI gene;Acc:770561]
61. PIK3C2B ENSGALG00000037043 4522 0.993 - - - - - - 0.993 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
62. TUSC3 ENSGALG00000013674 2848 0.993 - - - - - - 0.993 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
63. MRPS27 ENSGALG00000015002 6541 0.993 - - - - - - 0.993 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
64. NAP1L4 ENSGALG00000006446 10868 0.993 - - - - - - 0.993 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
65. THBS4 ENSGALG00000014804 4228 0.993 - - - - - - 0.993 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
66. RAP1GDS1 ENSGALG00000012222 10078 0.993 - - - - - - 0.993 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
67. PRRX1 ENSGALG00000003324 4859 0.993 - - - - - - 0.993 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
68. KIAA0922 4430 0.993 - - - - - - 0.993 - - - KIAA0922, transcript variant X4
69. UTP14A ENSGALG00000024039 8532 0.993 - - - - - - 0.993 - - - UTP14A small subunit processome component
70. ECE-1 ECE-1 3057 0.993 - - - - - - 0.993 - - -
71. PRRC2B 1997 0.993 - - - - - - 0.993 - - - proline rich coiled-coil 2B, transcript variant X12
72. GBX-1 GBX-1 1430 0.993 - - - - - - 0.993 - - -
73. WDYHV1 ENSGALG00000030059 2961 0.993 - - - - - - 0.993 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
74. EEF1E1 ENSGALG00000012781 22615 0.991 - - - - - - 0.991 - - - eukaryotic translation elongation factor 1 epsilon 1
75. AURKAIP1 ENSGALG00000001555 14715 0.99 - - - - - - 0.990 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
76. DHX36 ENSGALG00000043082 17619 0.99 - - - - - - 0.990 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
77. ENSGALG00000021694 ENSGALG00000021694 26011 0.99 - - - - - - 0.990 - - -
78. ATF4 ENSGALG00000012135 53361 0.988 - - - - - - 0.988 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
79. KIF2A ENSGALG00000014737 16391 0.986 - - - - - - 0.986 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
80. CWC15 ENSGALG00000017207 30922 0.983 - - - - - - 0.983 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
81. TRA2B ENSGALG00000006531 40566 0.982 - - - - - - 0.982 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
82. UBE2C ENSGALG00000026380 27639 0.982 - - - - - - 0.982 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
83. RPL39 ENSGALG00000008620 63315 0.976 - - - - - - 0.976 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
84. MTX2 ENSGALG00000009264 17304 0.975 - - - - - - 0.975 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
85. PSMA7 ENSGALG00000030411 42436 0.973 - - - - - - 0.973 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
86. DYNLRB1 ENSGALG00000034509 28361 0.972 - - - - - - 0.972 - - - dynein light chain roadblock-type 1
87. CBX3 ENSGALG00000011038 40977 0.967 - - - - - - 0.967 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
88. RPL19 ENSGALG00000001658 277294 0.912 - - - - - - 0.912 - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
89. VWA9 ENSGALG00000007491 4790 0.906 - - - - - - - - - 0.906 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
90. SLC25A17 ENSGALG00000012013 13948 0.906 - - - - - - - 0.906 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
91. KIDINS220 ENSGALG00000016409 854 0.899 - - - - - - - - - 0.899 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
92. ARID1B ENSGALG00000013683 3397 0.895 - - - - - - - - - 0.895 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
93. KLC1 ENSGALG00000011528 1621 0.89 - - - - - - - - - 0.890 kinesin light chain 1, transcript variant X6
94. SPATA20 ENSGALG00000006857 3506 0.884 - - - - - - - - - 0.884 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
95. DHFR ENSGALG00000026757 18478 0.884 - - 0.884 - - - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
96. CCDC66 ENSGALG00000005450 1262 0.883 - - - - - - - - - 0.883 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
97. SETD1B ENSGALG00000004324 2897 0.883 - - 0.883 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
98. MFSD1 ENSGALG00000009593 3116 0.881 - - - - - - - - - 0.881 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
99. C9orf89 C9orf89 3056 0.879 - - - - - - - - - 0.879
100. GPN2 ENSGALG00000027909 5204 0.879 - - - - - - - - - 0.879 GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]

There are 831 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA