Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CHMP2B

Gene Name Gene ID Reads Annotation
CHMP2B ENSGALG00000015496 3973 charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]











Genes with expression patterns similar to CHMP2B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHMP2B ENSGALG00000015496 3973 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
2. TMEM33 ENSGALG00000014248 6069 1.796 - - - - - - 0.862 0.934 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
3. TAF1B ENSGALG00000016437 2318 1.762 - - - - - - 0.856 0.906 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
4. CNEP1R1 ENSGALG00000029793 6536 1.709 - - - - - - 0.781 0.928 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
5. OSBPL1A ENSGALG00000015086 2702 1.697 - - - - - - 0.771 0.926 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
6. NAPEPLD ENSGALG00000008285 1295 1.687 - - - - - - 0.764 0.923 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
7. CHTF18 ENSGALG00000040157 2140 1.673 - - - - - - 0.774 0.899 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
8. TMA16 ENSGALG00000009501 6651 1.664 - - - - - - 0.778 0.886 - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
9. SERINC1 ENSGALG00000014868 12484 1.651 - - - - - - 0.706 0.945 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
10. ATXN2 ENSGALG00000004625 6306 1.616 - - - - - - 0.717 0.899 - - ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]
11. UHMK1 ENSGALG00000002734 2308 1.602 - - - - - - 0.810 0.792 - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
12. ASAP2 ENSGALG00000016419 1393 1.591 - - 0.795 - - - 0.796 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
13. SRP19 ENSGALG00000000218 14207 1.589 - - - - - - 0.715 0.874 - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
14. TUFT1 ENSGALG00000032955 1317 1.54 - - - - - - 0.796 0.744 - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
15. DUT ENSGALG00000038032 34659 1.429 - - - - - - 0.721 0.708 - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
16. MAP3K4 ENSGALG00000020003 6378 0.956 - - - - - - - 0.956 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
17. PPM1B ENSGALG00000030691 4513 0.952 - - - - - - - 0.952 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
18. USP12P1 USP12P1 4193 0.95 - - - - - - - 0.950 - -
19. TTPAL ENSGALG00000004244 2734 0.948 - - - - - - - 0.948 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
20. LSMD1 LSMD1 2562 0.946 - - - - - - - 0.946 - -
21. ENSGALG00000009863 ENSGALG00000009863 7375 0.942 - - - - - - - 0.942 - -
22. RPS6KA RPS6KA 6745 0.942 - - - - - - - 0.942 - -
23. TMEM185A ENSGALG00000009139 4424 0.942 - - - - - - - 0.942 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
24. SUN1 ENSGALG00000003781 3442 0.941 - - - - - - - 0.941 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
25. STX16 ENSGALG00000007541 6458 0.941 - - - - - - - 0.941 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
26. XRCC3 ENSGALG00000011533 3768 0.94 - - - - - - - 0.940 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
27. gga-mir-1737 ENSGALG00000025206 3910 0.937 - - - - - - - 0.937 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
28. RGN ENSGALG00000016724 3184 0.935 - - - - - - - 0.935 - - regucalcin [Source:NCBI gene;Acc:395480]
29. ESRRG ENSGALG00000009645 2783 0.935 - - - - - - - 0.935 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
30. PLA2G12A ENSGALG00000012185 5261 0.935 - - - - - - - 0.935 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
31. CENPI ENSGALG00000005038 2608 0.935 - - - - - - - 0.935 - - centromere protein I [Source:NCBI gene;Acc:395207]
32. KIF25 ENSGALG00000011299 2601 0.934 - - - - - - - 0.934 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
33. SIPA1L2 ENSGALG00000037506 3651 0.933 - - - - - - - 0.933 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
34. GNPAT ENSGALG00000011163 4286 0.931 - - - - - - - 0.931 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
35. LAMB1 ENSGALG00000007905 7737 0.931 - - - - - - - 0.931 - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
36. TST ENSGALG00000012488 5314 0.93 - - - - - - - 0.930 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
37. TRIP11 ENSGALG00000010763 3146 0.929 - - - - - - - 0.929 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
38. MICU1 ENSGALG00000004372 1978 0.929 - - - - - - - 0.929 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
39. ENSGALG00000017324 ENSGALG00000017324 8235 0.928 - - - - - - - 0.928 - -
40. CMTM7 ENSGALG00000011488 1406 0.926 - - - - - - - 0.926 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
41. SNTB1 ENSGALG00000034528 3907 0.925 - - - - - - - 0.925 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
42. C1orf50 ENSGALG00000004800 4894 0.924 - - - - - - - 0.924 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
43. GTF2H4 GTF2H4 5227 0.923 - - - - - - - 0.923 - -
44. DMTF1 ENSGALG00000030844 3584 0.922 - - - - - - - 0.922 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
45. NUDT4 ENSGALG00000011285 2998 0.922 - - - - - - - 0.922 - - nudix hydrolase 4, transcript variant X5
46. POLD3 ENSGALG00000017307 2136 0.921 - - - - - - - 0.921 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
47. GOLPH3 ENSGALG00000028267 9692 0.921 - - - - - - - 0.921 - - golgi phosphoprotein 3, transcript variant X1
48. SEMA6D ENSGALG00000030542 3780 0.921 - - - - - - - 0.921 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
49. PARPBP ENSGALG00000012756 1895 0.921 - - - - - - - 0.921 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
50. CLCN7 ENSGALG00000030826 3173 0.92 - - - - - - - 0.920 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
51. CLUAP1 ENSGALG00000030877 4269 0.919 - - - - - - - 0.919 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
52. ZBTB24 ENSGALG00000015231 1384 0.918 - - - - - - - 0.918 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
53. MED12L ENSGALG00000010370 765 0.916 - - - - - - - 0.916 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
54. FAF1 ENSGALG00000010536 1522 0.916 - - - - - - - 0.916 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
55. LGALS1_1 ENSGALG00000012420 1560 0.916 - - - - - - - 0.916 - - galectin 1 [Source:NCBI gene;Acc:396491]
56. SUV420H1 SUV420H1 2361 0.916 - - - - - - - 0.916 - -
57. WDYHV1 ENSGALG00000030059 2961 0.916 - - - - - - - 0.916 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
58. MST4 MST4 1931 0.916 - - - - - - - 0.916 - -
59. ANO6 ENSGALG00000009638 470 0.915 - - - - - - - 0.915 - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
60. SMARCD2 ENSGALG00000029304 11867 0.914 - - - - - - - 0.914 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
61. ZMYM3 ENSGALG00000005533 2927 0.914 - - - - - - - 0.914 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
62. HNMT ENSGALG00000012377 227 0.914 - - - - - - - 0.914 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
63. DNA2 ENSGALG00000004037 5426 0.914 - - - - - - - 0.914 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
64. OFD1 ENSGALG00000016576 1916 0.913 - - - - - - - 0.913 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
65. PDGF-A PDGF-A 5166 0.912 - - - - - - - 0.912 - -
66. COG5 ENSGALG00000042764 4205 0.912 - - - - - - - 0.912 - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
67. CUL5 ENSGALG00000017165 2480 0.911 - - - - - - - 0.911 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
68. NF1 ENSGALG00000005660 1610 0.91 - - - - - - - 0.910 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
69. MCAT ENSGALG00000034275 4598 0.91 - - - - - - - 0.910 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
70. DCUN1D2 ENSGALG00000029145 2414 0.91 - - - - - - - 0.910 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
71. PRKAB2 ENSGALG00000001678 1999 0.909 - - - - - - - 0.909 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
72. STAU2 ENSGALG00000031390 2008 0.909 - - - - - - - 0.909 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
73. OSR1 ENSGALG00000016473 1202 0.909 - - - - - - - 0.909 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
74. CASP6 ENSGALG00000012186 6639 0.908 - - - - - - 0.908 - - - caspase 6 [Source:NCBI gene;Acc:395477]
75. SMPD2 ENSGALG00000033245 462 0.907 - - - - - - - 0.907 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
76. MYEOV2 MYEOV2 5155 0.907 - - - - - - 0.907 - - -
77. VWF ENSGALG00000017272 1012 0.907 - - - - - - - 0.907 - - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
78. SURF1 ENSGALG00000033754 2130 0.906 - - - - - - - 0.906 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
79. FER1L6 ENSGALG00000033783 196 0.906 - - - - - - - 0.906 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
80. ATG2B ENSGALG00000042088 918 0.906 - - - - - - - 0.906 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
81. ZNF598 ENSGALG00000005598 8270 0.906 - - - - - - - 0.906 - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
82. AP3D1 ENSGALG00000000996 16143 0.905 - - - - - - - 0.905 - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
83. ZNF652 ENSGALG00000001279 1188 0.905 - - - - - - - 0.905 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
84. gga-mir-6596 ENSGALG00000026117 2893 0.905 - - - - - - - 0.905 - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
85. PPP1CB ENSGALG00000010026 6909 0.904 - - - - - - - 0.904 - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
86. C10ORF58 C10ORF58 5045 0.904 - - - - - - - 0.904 - -
87. IGFBP7 ENSGALG00000037332 2993 0.904 - - - - - - - 0.904 - - insulin like growth factor binding protein 7, transcript variant X1
88. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.903 - - - - - - 0.903 - - -
89. TNNC1 ENSGALG00000001459 7110 0.902 - - - - - - - 0.902 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
90. FBXW5 ENSGALG00000030831 5927 0.901 - - - - - - - 0.901 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
91. MACF1 ENSGALG00000003693 1043 0.9 - - - - - - - 0.900 - - microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]
92. ZNF142 ENSGALG00000011393 2078 0.899 - - - - - - - 0.899 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
93. VAT1 ENSGALG00000002818 10333 0.899 - - - - - - - 0.899 - - vesicle amine transport 1 [Source:HGNC Symbol;Acc:HGNC:16919]
94. SMPDL3B ENSGALG00000000737 223 0.898 - - - - - - - 0.898 - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
95. MRPL23 ENSGALG00000006561 13737 0.897 - - - - - - 0.897 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
96. ENSGALG00000000514 ENSGALG00000000514 9906 0.897 - - - - - - 0.897 - - -
97. ARHGAP12 ENSGALG00000007254 479 0.897 - - - - - - - 0.897 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
98. ENSGALG00000014375 ENSGALG00000014375 4741 0.897 - - - - - - - 0.897 - -
99. DAB1 ENSGALG00000010857 1085 0.897 - - - - - - - 0.897 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
100. ENSGALG00000003847 ENSGALG00000003847 1220 0.896 - - - - - - - 0.896 - -

There are 377 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA