Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHMP1A

Gene Name Gene ID Reads Annotation
CHMP1A ENSGALG00000006161 4195 charged multivesicular body protein 1A [Source:NCBI gene;Acc:415841]











Genes with expression patterns similar to CHMP1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHMP1A ENSGALG00000006161 4195 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 1A [Source:NCBI gene;Acc:415841]
2. KBTBD2 ENSGALG00000038704 2821 0.989 - - - - - - - 0.989 - - kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]
3. DGKD ENSGALG00000001730 4456 0.987 - - - - - - - 0.987 - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
4. KDELR3 ENSGALG00000032313 4376 0.971 - - - - - - - 0.971 - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
5. PKIB ENSGALG00000027036 1663 0.958 - - - - - - - 0.958 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
6. SLC2A10 ENSGALG00000004498 421 0.958 - - - - - - - 0.958 - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
7. KCNE3 ENSGALG00000022696 561 0.958 - - - - - - - 0.958 - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
8. PPP2R3C ENSGALG00000010052 637 0.958 - - - - - - - 0.958 - - protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
9. KIAA1598 KIAA1598 989 0.957 - - - - - - - 0.957 - -
10. PLA2R1 ENSGALG00000011149 1964 0.957 - - - - - - - 0.957 - - phospholipase A2 receptor 1 [Source:NCBI gene;Acc:404304]
11. KCTD10 ENSGALG00000005138 1191 0.957 - - - - - - - 0.957 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
12. PDCD2 ENSGALG00000011169 3594 0.956 - - - - - - - 0.956 - - programmed cell death 2 [Source:NCBI gene;Acc:421550]
13. PPP1R21 ENSGALG00000008937 2343 0.956 - - - - - - - 0.956 - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
14. SLC35E1 ENSGALG00000003794 2563 0.956 - - - - - - - 0.956 - - solute carrier family 35 member E1 [Source:HGNC Symbol;Acc:HGNC:20803]
15. EXOC4 ENSGALG00000008477 4684 0.956 - - - - - - - 0.956 - - exocyst complex component 4 [Source:NCBI gene;Acc:416700]
16. KIAA1324L ENSGALG00000030324 1695 0.956 - - - - - - - 0.956 - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
17. SLC25A15 ENSGALG00000017032 6773 0.955 - - - - - - - 0.955 - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
18. ACAD8 ENSGALG00000001557 2562 0.955 - - - - - - - 0.955 - - acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
19. FBN2 ENSGALG00000014686 4538 0.954 - - - - - - - 0.954 - - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
20. PRKRIP1 ENSGALG00000001833 5092 0.954 - - - - - - - 0.954 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
21. CDCA9 ENSGALG00000021225 2244 0.952 - - - - - - - 0.952 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
22. URB1 ENSGALG00000015887 5854 0.952 - - - - - - - 0.952 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
23. SPTAN1 ENSGALG00000004719 20251 0.951 - - - - - - - 0.951 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
24. TCTN3 ENSGALG00000010517 3985 0.951 - - - - - - - 0.951 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
25. TLK2 ENSGALG00000000410 4690 0.951 - - - - - - - 0.951 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
26. ITGA1 ENSGALG00000014891 11378 0.95 - - - - - - - 0.950 - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
27. LZTFL1 ENSGALG00000033928 3493 0.95 - - - - - - - 0.950 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
28. VIMENTIN VIMENTIN 33105 0.949 - - - - - - - 0.949 - -
29. COX20 ENSGALG00000027440 5881 0.948 - - - - - - - 0.948 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
30. KLF10 ENSGALG00000037913 3529 0.947 - - - - - - - 0.947 - - Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]
31. MRPS18A ENSGALG00000010296 11039 0.946 - - - - - - - 0.946 - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
32. MZT1 ENSGALG00000016932 9269 0.944 - - - - - - - 0.944 - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
33. PUM1 ENSGALG00000042598 9392 0.944 - - - - - - - 0.944 - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
34. AMOTL2 5217 0.944 - - - - - - - 0.944 - - angiomotin like 2, transcript variant X3
35. MYO1B ENSGALG00000007712 8755 0.941 - - - - - - - 0.941 - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
36. ARL4A ENSGALG00000027757 4285 0.937 - - - - - - - 0.937 - - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
37. VATB VATB 13756 0.935 - - - - - - - 0.935 - -
38. CYTL1 ENSGALG00000015015 4438 0.93 - - - - - - - 0.930 - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
39. CDC45 ENSGALG00000001616 8432 0.929 - - - - - - - 0.929 - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
40. ENSGALG00000004132 ENSGALG00000004132 9287 0.928 - - - - - - - 0.928 - -
41. CPSF6 ENSGALG00000019355 7634 0.928 - - - - - - - 0.928 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
42. AATF ENSGALG00000005420 6501 0.925 - - - - - - - 0.925 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
43. UCH-L1 UCH-L1 12697 0.924 - - - - - - - 0.924 - -
44. GPATCH2 ENSGALG00000009627 4061 0.922 - - - - - - - 0.922 - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
45. IGF2BP1 ENSGALG00000041204 6420 0.92 - - - - - - - 0.920 - - insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
46. RAE1 ENSGALG00000007653 8930 0.916 - - - - - - - 0.916 - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
47. STRN ENSGALG00000010580 7561 0.909 - - - - - - - 0.909 - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
48. MTX2 ENSGALG00000009264 17304 0.903 - - - - - - - 0.903 - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
49. HIBCH ENSGALG00000043307 11990 0.902 - - - - - - - 0.902 - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
50. MTHFD1 ENSGALG00000011797 11001 0.899 - - - - - - - 0.899 - - methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
51. INPP5E ENSGALG00000001964 3580 0.893 - - - - - - - 0.893 - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
52. FAM110A ENSGALG00000046425 5558 0.884 - - - - - - - 0.884 - - family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
53. CYB5A ENSGALG00000013708 8287 0.882 - - - - - - - 0.882 - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
54. ORC5 ENSGALG00000008175 3426 0.875 - - - - - - - 0.875 - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
55. PPIC ENSGALG00000005346 5002 0.874 - - - - - - - 0.874 - - peptidylprolyl isomerase C [Source:HGNC Symbol;Acc:HGNC:9256]
56. DNAJC1 ENSGALG00000007914 8028 0.873 - - - - - - - 0.873 - - DnaJ heat shock protein family (Hsp40) member C1 [Source:HGNC Symbol;Acc:HGNC:20090]
57. VPS35 ENSGALG00000004375 8059 0.86 - - - - - - - 0.860 - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
58. TMEM30A ENSGALG00000015904 8533 0.857 - - - - - - - 0.857 - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
59. RRP9 ENSGALG00000043359 9747 0.846 - - - - - - - 0.846 - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
60. VDAC3 ENSGALG00000041463 21595 0.845 - - - - - - - 0.845 - - voltage dependent anion channel 3, transcript variant X9
61. TBL1X ENSGALG00000040006 28597 0.835 - - - - - - - 0.835 - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
62. AHCY ENSGALG00000033677 35555 0.833 - - - - - - - 0.833 - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
63. ZNF644 ENSGALG00000034253 28348 0.827 - - - - - - - 0.827 - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
64. MCTS1 ENSGALG00000008517 27514 0.822 - - - - - - - 0.822 - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
65. SSR3 ENSGALG00000028683 24334 0.813 - - - - - - - 0.813 - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
66. HADH ENSGALG00000016124 18216 0.808 - - - - - - - 0.808 - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
67. ENSGALG00000024035 ENSGALG00000024035 544 0.807 - - - 0.807 - - - - - -
68. KCTD17 ENSGALG00000042419 90 0.806 - - - 0.806 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
69. BIRC5 ENSGALG00000008713 46856 0.803 - - - - - - - 0.803 - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
70. RGS16 ENSGALG00000033535 139 0.802 - - - 0.802 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
71. NLK ENSGALG00000005699 9066 0.8 - - - - - - - 0.800 - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
72. KPNA3 ENSGALG00000017009 17330 0.794 - - - - - - - 0.794 - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
73. CYP4A22 ENSGALG00000020688 741 0.792 - - - 0.792 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
74. ZPBP2 ENSGALG00000013484 14 0.791 - - - 0.791 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
75. HTR1E ENSGALG00000015826 11 0.791 - - - 0.791 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
76. PITPNB ENSGALG00000005654 21578 0.791 - - - - - - - 0.791 - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
77. ACOX2 ENSGALG00000007132 47 0.791 - - - 0.791 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
78. CP ENSGALG00000030773 119 0.79 - - - 0.790 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
79. TRAF2 ENSGALG00000042838 24 0.79 - - - 0.790 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
80. ZDHHC8 ENSGALG00000002124 35 0.788 - - - 0.788 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
81. NUP160 ENSGALG00000043074 46 0.788 - - - 0.788 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
82. VEPH1 ENSGALG00000009682 51 0.786 - - - 0.786 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
83. MTERFD3 MTERFD3 20 0.785 - - - 0.785 - - - - - -
84. OTUD7B ENSGALG00000013348 38 0.785 - - - 0.785 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
85. OXGR1 ENSGALG00000016891 13 0.782 - - - 0.782 - - - - - - oxoglutarate receptor 1
86. PABPC1 ENSGALG00000030280 23934 0.781 - - - - - - - 0.781 - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
87. GOPC ENSGALG00000014902 352 0.78 - - - 0.780 - - - - - - golgi associated PDZ and coiled-coil motif containing, transcript variant X2
88. TMEM177 ENSGALG00000011593 311 0.78 - - - 0.780 - - - - - - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
89. GSR ENSGALG00000037781 8043 0.779 - - - - - - - 0.779 - - glutathione-disulfide reductase [Source:HGNC Symbol;Acc:HGNC:4623]
90. gga-mir-454 ENSGALG00000033526 22 0.777 - - - 0.777 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
91. ENSGALG00000028652 ENSGALG00000028652 65 0.776 - - - 0.776 - - - - - -
92. GBAS 18453 0.771 - - - - - - - 0.771 - - glioblastoma amplified sequence
93. BEGAIN ENSGALG00000011236 35 0.771 - - - 0.771 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
94. COL4A5 ENSGALG00000008141 15874 0.769 - - - - - - - 0.769 - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
95. RTCB ENSGALG00000012611 14360 0.769 - - - - - - - 0.769 - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
96. ARHGEF5 ENSGALG00000017276 32 0.763 - - - 0.763 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
97. UBLCP1 ENSGALG00000003672 9332 0.762 - - - - - - - 0.762 - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
98. NUP107 ENSGALG00000009934 2097 0.762 - - - 0.762 - - - - - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
99. ARL6IP5 ENSGALG00000038904 12956 0.761 - - - - - - - 0.761 - - ADP ribosylation factor like GTPase 6 interacting protein 5 [Source:NCBI gene;Acc:426074]
100. CLEC3B ENSGALG00000030969 363 0.761 - - - 0.761 - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]

There are 51 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA