Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHM

Gene Name Gene ID Reads Annotation
CHM ENSGALG00000006906 4953 CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]











Genes with expression patterns similar to CHM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHM ENSGALG00000006906 4953 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
2. DYNC1I2 ENSGALG00000009551 5420 2.201 - - - 0.737 - - 0.707 0.757 - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
3. UTP18 ENSGALG00000002985 7129 1.637 - - - 0.873 - - - 0.764 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
4. ENSGALG00000007514 ENSGALG00000007514 4866 1.637 - - - 0.841 - - 0.796 - - -
5. NUDT4 ENSGALG00000011285 2998 1.634 - - - 0.903 - - 0.731 - - - nudix hydrolase 4, transcript variant X5
6. ARPC1A ENSGALG00000004693 11583 1.622 - - 0.818 0.804 - - - - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
7. KIAA1143 ENSGALG00000035952 6735 1.613 - - - 0.875 - - - 0.738 - - KIAA1143 [Source:NCBI gene;Acc:420709]
8. RIOK2 ENSGALG00000015288 6280 1.605 - - - - - - 0.836 0.769 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
9. HINT3 ENSGALG00000044342 5674 1.599 - - - 0.863 - - - 0.736 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
10. PANK1 ENSGALG00000006431 2910 1.584 - - - 0.872 - - - 0.712 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
11. PHF14 ENSGALG00000038041 13687 1.58 - - - 0.773 - - - 0.807 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
12. SRSF11 ENSGALG00000011305 10435 1.578 - - - 0.871 - - - 0.707 - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
13. MSH6 ENSGALG00000008957 6396 1.569 - - - 0.720 - - - 0.849 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
14. XPC ENSGALG00000006357 2484 1.569 - - - 0.826 - - - 0.743 - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
15. PER2 ENSGALG00000005521 1115 1.561 - - - 0.833 - - 0.728 - - - period circadian regulator 2 [Source:NCBI gene;Acc:374116]
16. SEC22A ENSGALG00000011697 7981 1.555 - - - - - - 0.776 0.779 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
17. WIPI2 ENSGALG00000004557 4961 1.54 - - - 0.767 - - - 0.773 - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
18. PCTP ENSGALG00000003099 5851 1.538 - - - - - - 0.764 0.774 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
19. RRP1B ENSGALG00000035696 12309 1.537 - - - - - - 0.742 0.795 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
20. CDC42BPB ENSGALG00000011432 8220 1.531 - - - 0.786 - - - 0.745 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
21. CACYBP ENSGALG00000004554 7320 1.529 - - - 0.784 - - - 0.745 - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
22. NDUFA12 ENSGALG00000011325 19807 1.526 - - - - - - 0.746 0.780 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
23. GLRX3 ENSGALG00000010464 22578 1.516 - - - 0.801 - - 0.715 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
24. ATG16L1 ENSGALG00000001619 3562 1.516 - - - 0.813 - - - 0.703 - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
25. AMACR ENSGALG00000003326 2657 1.514 - - - 0.813 - - 0.701 - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
26. EMC3 ENSGALG00000003738 10363 1.513 - - - 0.762 - - - 0.751 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
27. INTS10 ENSGALG00000010130 6320 1.509 - - - 0.788 - - - 0.721 - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
28. ATR ENSGALG00000002663 4626 1.501 - - - 0.764 - - - 0.737 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
29. C4orf27 C4orf27 16724 1.499 - - - - - - 0.758 0.741 - -
30. EXOC2 ENSGALG00000012837 4914 1.496 - - - - - - 0.781 0.715 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
31. FANCL ENSGALG00000030022 7423 1.495 - - - - - - 0.726 0.769 - - FA complementation group L [Source:NCBI gene;Acc:421202]
32. DCPS ENSGALG00000031143 10191 1.491 - - - - - - 0.752 0.739 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
33. HEATR3 ENSGALG00000041613 2704 1.49 - - - 0.786 - - - 0.704 - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
34. TBCD ENSGALG00000001503 7880 1.485 - - - 0.766 - - 0.719 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
35. MRPL41 ENSGALG00000008746 3833 1.485 - - - - - - 0.734 0.751 - - mitochondrial ribosomal protein L41 [Source:NCBI gene;Acc:417261]
36. YIPF6 ENSGALG00000035973 3333 1.48 - - - - - - 0.744 0.736 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
37. TAF2 ENSGALG00000043193 6311 1.476 - - - - - - 0.722 0.754 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
38. STRN3 ENSGALG00000040464 9045 1.476 - - - - - - 0.713 0.763 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
39. SUCLA2 ENSGALG00000016993 4735 1.468 - - - - - - 0.701 0.767 - - succinate-CoA ligase ADP-forming beta subunit [Source:NCBI gene;Acc:418857]
40. TTLL5 ENSGALG00000010340 4875 1.466 - - - 0.743 - - - 0.723 - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
41. INTS12 ENSGALG00000010575 2976 1.464 - - - 0.763 - - - 0.701 - - integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
42. METTL5 ENSGALG00000009676 3252 1.458 - - - - - - 0.704 0.754 - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
43. BORA ENSGALG00000016931 3660 1.456 - - - - - - 0.746 0.710 - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
44. C6ORF162 C6ORF162 4217 1.45 - - - - - - 0.749 - - 0.701
45. ZNF622 ENSGALG00000037171 5706 1.449 - - - 0.708 - - - 0.741 - - zinc finger protein 622 [Source:NCBI gene;Acc:373921]
46. CCDC132 CCDC132 2632 1.446 - - - 0.704 - - - 0.742 - -
47. USP45 ENSGALG00000015478 3101 1.44 - - - 0.727 - - 0.713 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
48. MRPL55 5995 1.436 - - - 0.735 - - - 0.701 - - mitochondrial ribosomal protein L55
49. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 1.432 - - - 0.700 - - 0.732 - - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
50. CDK2AP1 ENSGALG00000034919 5469 1.429 - - - - - - - 0.709 0.720 - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
51. ING3 ENSGALG00000009023 4961 1.426 - - - 0.715 - - - 0.711 - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
52. SURF2 ENSGALG00000003181 3500 1.423 - - - 0.723 - - 0.700 - - - surfeit 2 [Source:NCBI gene;Acc:417156]
53. IARS ENSGALG00000004813 12936 1.421 - - - 0.711 - - - 0.710 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
54. C12orf45 C12orf45 2445 0.934 - - - 0.934 - - - - - -
55. VWDE ENSGALG00000042443 160 0.93 - - - 0.930 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
56. MLH3 ENSGALG00000010304 231 0.929 - - - 0.929 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
57. ZBTB17 ENSGALG00000035352 280 0.928 - - - 0.928 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
58. FRRS1 ENSGALG00000005418 332 0.928 - - - 0.928 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
59. PASK ENSGALG00000006016 3096 0.927 - - - 0.927 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
60. WDR96 WDR96 255 0.925 - - - 0.925 - - - - - -
61. DBN1 ENSGALG00000033405 216 0.924 - - - 0.924 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
62. MCCC2L ENSGALG00000011255 889 0.924 - - - 0.924 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
63. KIF6 ENSGALG00000010057 84 0.924 - - - 0.924 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
64. CA3 CA3 200 0.922 - - - 0.922 - - - - - -
65. PDE4B ENSGALG00000011094 1871 0.921 - - - 0.921 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
66. ENSGALG00000027412 ENSGALG00000027412 202 0.921 - - - 0.921 - - - - - -
67. KIAA1432 KIAA1432 1792 0.92 - - - 0.920 - - - - - -
68. ADCY9 ENSGALG00000007779 766 0.919 - - - 0.919 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
69. NME6 ENSGALG00000038044 1231 0.919 - - - 0.919 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
70. OVCA2 ENSGALG00000045371 2862 0.919 - - - 0.919 - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
71. TRIM62 ENSGALG00000028437 5124 0.919 - - - 0.919 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
72. TBK1 ENSGALG00000009840 1650 0.918 - - - 0.918 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
73. RBFOX1 ENSGALG00000034325 2133 0.917 - - - 0.917 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
74. NCOA3 ENSGALG00000004570 243 0.916 - - - 0.916 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
75. BTG1L ENSGALG00000004676 2293 0.916 - - - 0.916 - - - - - - protein BTG1-like
76. GFPT2 ENSGALG00000039705 562 0.913 - - - 0.913 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
77. SNORA31 SNORA31 183 0.913 - - - 0.913 - - - - - -
78. CYP20A1 ENSGALG00000008730 930 0.912 - - - 0.912 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
79. GUF1 ENSGALG00000014217 211 0.911 - - - 0.911 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
80. RNPC3 ENSGALG00000005162 269 0.91 - - - 0.910 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
81. ITPKB ENSGALG00000009068 324 0.909 - - - 0.909 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
82. IFT43 ENSGALG00000020415 1218 0.908 - - - 0.908 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
83. ASRGL1 ENSGALG00000015949 403 0.904 - - - 0.904 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
84. HMHA1 HMHA1 929 0.9 - - - 0.900 - - - - - -
85. GALNT12 ENSGALG00000013197 1330 0.899 - - - 0.899 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
86. PRDM4 ENSGALG00000012619 876 0.898 - - - 0.898 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
87. IRF6 ENSGALG00000001405 3144 0.898 - - - 0.898 - - - - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
88. TMOD1 ENSGALG00000002125 933 0.897 - - - 0.897 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
89. BAG5 ENSGALG00000031062 4498 0.896 - - - 0.896 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
90. ASCC1 ENSGALG00000026019 3583 0.895 - - - 0.895 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
91. PRKD1 ENSGALG00000009900 2094 0.894 - - - 0.894 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
92. PM20D1 ENSGALG00000000724 2108 0.893 - - - 0.893 - - - - - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
93. NEK7 ENSGALG00000002216 4532 0.892 - - - 0.892 - - - - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
94. DPP8 ENSGALG00000007437 1763 0.892 - - - 0.892 - - - - - - dipeptidyl peptidase 8 [Source:HGNC Symbol;Acc:HGNC:16490]
95. VPS13B 2293 0.892 - - - 0.892 - - - - - - vacuolar protein sorting 13 homolog B
96. LRRCC1 ENSGALG00000039499 480 0.889 - - - 0.889 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
97. DEPDC5 ENSGALG00000006766 1592 0.887 - - - 0.887 - - - - - - DEP domain containing 5, transcript variant X6
98. ITGA9 ENSGALG00000029378 415 0.886 - - - 0.886 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
99. ENTPD4 ENSGALG00000000390 1394 0.886 - - - 0.886 - - - - - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
100. NR6A1 ENSGALG00000001073 2071 0.882 - - - 0.882 - - - - - - nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]

There are 749 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA