Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CHL1

Gene Name Gene ID Reads Annotation
CHL1 CHL1 1553










Genes with expression patterns similar to CHL1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CHL1 CHL1 1553 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. rbfox3 rbfox3 1443 4.218 0.736 0.869 - - - 0.889 0.940 - 0.784
3. neurog1 ENSDARG00000056130 3924 4.217 0.784 0.799 - - - 0.921 0.929 - 0.784 neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
4. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 4.113 0.726 0.890 - - - 0.926 0.862 - 0.709 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
5. dpysl5a ENSDARG00000011141 1827 4.04 0.806 0.861 0.702 - - 0.748 0.923 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
6. gad2 ENSDARG00000015537 724 3.902 0.820 0.810 - - - 0.786 0.733 - 0.753 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
7. CR848045.1 CR848045.1 459 3.899 0.781 0.798 - - 0.704 0.776 0.840 - -
8. lhx1a ENSDARG00000014018 958 3.824 0.708 0.737 - 0.766 - 0.808 0.805 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
9. nova2 ENSDARG00000017673 7685 3.655 0.924 0.885 - - - 0.927 0.919 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
10. nes ENSDARG00000088805 2710 3.59 0.882 0.883 - - - 0.941 0.884 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
11. stx1b ENSDARG00000000503 2724 3.573 0.828 0.970 - - - 0.872 0.903 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
12. scn8aa ENSDARG00000005775 792 3.538 0.715 0.986 - - - 0.899 0.938 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
13. slc18a3a ENSDARG00000006356 1285 3.532 0.811 0.902 - - - 0.909 0.910 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
14. myt1b ENSDARG00000102879 5411 3.492 0.823 0.869 - - - 0.876 0.924 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
15. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.49 0.883 0.784 - - - 0.921 0.902 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
16. pcdh1gc5 ENSDARG00000104826 10052 3.48 0.929 0.833 - - - 0.834 0.884 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
17. slc32a1 ENSDARG00000059775 1092 3.477 0.841 0.917 - - - 0.819 0.900 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
18. nadl1.1 1200 3.47 0.758 0.955 - - - 0.909 0.848 - - neural adhesion molecule L1.1, transcript variant X1
19. SNAP91 ENSDARG00000098809 556 3.442 - 0.968 - - - 0.780 0.881 - 0.813 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
20. si:ch73-21g5.7 ENSDARG00000093156 9412 3.428 0.895 0.907 - - - 0.700 0.926 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
21. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 3.421 - 0.887 - 0.715 - 0.945 0.874 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
22. SLC5A7 SLC5A7 453 3.412 0.858 0.901 - - - 0.789 0.864 - -
23. gng3 ENSDARG00000009553 2530 3.392 0.846 0.856 - - - 0.823 0.867 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
24. rusc1 ENSDARG00000078125 617 3.386 0.737 - - - - 0.896 0.954 - 0.799 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
25. CU928222.1 ENSDARG00000097436 1662 3.38 0.813 0.842 - - - 0.833 0.892 - -
26. nrarpb ENSDARG00000018958 6225 3.375 0.839 0.722 - - - 0.889 0.925 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
27. ZFHX3 ENSDARG00000103057 7759 3.371 0.838 - 0.756 - - 0.904 0.873 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
28. GLRA3 ENSDARG00000011066 242 3.369 0.906 0.703 - - - 0.856 0.904 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
29. slc1a2b ENSDARG00000102453 3136 3.367 0.771 0.819 - - - 0.849 0.928 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
30. snap25a ENSDARG00000020609 4537 3.354 0.818 0.853 - - - 0.832 0.851 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
31. si:ch211-152f6.6 si:ch211-152f6.6 278 3.353 0.756 0.842 - - - 0.852 0.903 - -
32. scrt2 ENSDARG00000056175 4331 3.328 0.771 0.846 - - - 0.800 0.911 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
33. pcsk1nl ENSDARG00000076170 1232 3.328 0.753 0.986 - - - 0.742 0.847 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
34. stmn2b ENSDARG00000070537 1586 3.323 0.771 0.796 - - - 0.875 0.881 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
35. ctnnd2b ENSDARG00000003779 964 3.321 0.785 0.782 - - - 0.850 0.904 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
36. slc1a3a ENSDARG00000104431 9888 3.318 0.792 0.788 - - - 0.842 0.896 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
37. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.317 0.824 - 0.700 - - 0.868 0.925 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
38. dpysl3 ENSDARG00000002587 4381 3.314 0.801 0.712 - - - 0.926 0.875 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
39. mir10d-1 mir10d-1 860 3.303 0.760 0.861 - - - 0.828 0.854 - -
40. rab39b rab39b 449 3.301 - 0.813 - - - 0.801 0.858 - 0.829
41. syt11a ENSDARG00000057913 1145 3.3 0.759 0.921 - - - 0.761 0.859 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
42. syngr3a ENSDARG00000014871 405 3.294 0.737 0.793 - - - 0.856 0.908 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
43. STMN3 ENSDARG00000038465 1009 3.291 0.759 - - 0.724 - 0.892 0.916 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
44. pax6a ENSDARG00000103379 3061 3.289 0.733 0.743 - - - 0.905 0.908 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
45. gap43 ENSDARG00000099744 4114 3.287 0.747 0.807 - - - 0.837 0.896 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
46. TUBB8P7_1 TUBB8P7_1 2722 3.26 0.749 0.855 - - - 0.827 0.829 - -
47. irx1b ENSDARG00000056594 2224 3.251 0.757 - - - - 0.853 0.921 - 0.720 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
48. BX957337.1 BX957337.1 1685 3.249 0.874 0.740 - - - 0.763 0.872 - -
49. stmn2a ENSDARG00000033234 2272 3.238 - 0.863 - - - 0.711 0.878 - 0.786 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
50. vsnl1a ENSDARG00000023228 1584 3.234 0.734 0.957 - - - 0.747 0.796 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
51. sv2bb ENSDARG00000060711 196 3.233 0.737 0.880 - - - 0.716 0.900 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
52. tmem59l ENSDARG00000003655 1536 3.211 0.818 - - - - 0.811 0.749 - 0.833 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
53. MAP1A MAP1A 847 3.201 0.709 0.827 - - - 0.800 0.865 - -
54. kcnc3a ENSDARG00000055855 1821 3.19 0.726 0.721 - - - 0.865 0.878 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
55. cadpsb ENSDARG00000070567 458 3.183 0.770 0.743 - - - 0.809 0.861 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
56. TUBB8P7_2 TUBB8P7_2 565 3.168 0.702 - - - - 0.833 0.820 - 0.813
57. zic4 ENSDARG00000031307 1228 3.163 0.732 0.931 - - - 0.790 0.710 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
58. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.157 0.722 0.777 - - - 0.823 0.835 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
59. rap2ip rap2ip 681 3.151 0.804 0.738 - - - 0.760 0.849 - -
60. si:ch211-247j9.1 ENSDARG00000079283 217 3.142 0.727 0.784 - - - 0.711 0.920 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
61. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 3.14 - 0.723 - - - 0.767 0.912 - 0.738 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
62. slc35g2b ENSDARG00000045447 378 3.117 0.751 0.738 - - - 0.801 0.827 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
63. sox19b ENSDARG00000040266 532 3.115 0.721 0.716 - - - 0.800 0.878 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
64. olig2 ENSDARG00000040946 1405 3.107 0.725 0.795 - - - - 0.758 - 0.829 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
65. cldn5a ENSDARG00000043716 3865 3.107 0.843 0.701 - - - 0.725 0.838 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
66. atp1b4 ENSDARG00000053262 1337 3.1 0.765 0.757 - - - 0.725 0.853 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
67. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.09 0.723 - 0.702 - - 0.823 0.842 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
68. PPP1R9B PPP1R9B 855 3.019 0.751 0.723 - - - 0.815 0.730 - -
69. ank2b ENSDARG00000043313 3065 3.018 0.778 - - - - 0.738 0.712 - 0.790 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
70. jph3 ENSDARG00000102204 175 2.956 - 0.723 - - - 0.722 0.701 - 0.810 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
71. vgf ENSDARG00000105529 247 2.764 0.919 - - - - 0.941 0.904 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
72. AGO1 ENSDARG00000092644 4521 2.742 0.872 - - - - 0.924 0.946 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
73. epha4b ENSDARG00000011600 3110 2.714 0.846 - - - - 0.966 0.902 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
74. sox2 ENSDARG00000070913 2763 2.707 0.886 0.928 - - - - 0.893 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
75. tmie ENSDARG00000069423 305 2.694 0.866 - - - - 0.870 0.958 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
76. vim ENSDARG00000010008 3551 2.68 0.900 - - - - 0.929 0.851 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
77. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.67 0.863 - - - - 0.874 0.933 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
78. tuba1c ENSDARG00000055216 8384 2.667 0.887 - - - - 0.886 0.894 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
79. clstn3 ENSDARG00000073883 590 2.666 0.861 - - - - 0.899 0.906 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
80. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.661 0.828 - - - - 0.899 0.934 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
81. mapk12b ENSDARG00000006409 2246 2.661 0.828 0.895 - - - - 0.938 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
82. CABZ01111990.1 CABZ01111990.1 4374 2.657 0.868 - - - - 0.891 0.898 - -
83. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.656 - 0.856 - - - 0.838 0.962 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
84. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.65 0.917 - - - - 0.800 0.933 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
85. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.642 - 0.870 - - - 0.831 0.941 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
86. her2 ENSDARG00000038205 3219 2.641 0.869 - - - - 0.823 0.949 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
87. TUBB8P7 TUBB8P7 1353 2.639 0.775 0.929 - - - 0.935 - - -
88. sox21b ENSDARG00000008540 1460 2.631 0.816 0.881 - - - - 0.934 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
89. nova1 ENSDARG00000020178 4129 2.631 - 0.837 - - - 0.884 0.910 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
90. fyna ENSDARG00000011370 1679 2.629 0.771 - - - - 0.883 0.975 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
91. EFCC1 ENSDARG00000077826 1359 2.629 0.916 - - - - 0.878 0.835 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
92. CR847998.1 ENSDARG00000104784 518 2.625 0.887 - - - - 0.871 0.867 - -
93. PRKAR2B ENSDARG00000036446 812 2.624 0.788 - - - - 0.881 0.955 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
94. atp1a3a ENSDARG00000018259 5393 2.616 0.753 0.934 - - - 0.929 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
95. dla ENSDARG00000010791 9281 2.613 0.909 0.774 - - - - 0.930 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
96. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.613 0.870 0.846 - - - - 0.897 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
97. EPB41L1 EPB41L1 1896 2.612 0.849 - - - - 0.885 0.878 - -
98. calca ENSDARG00000056590 150 2.61 - 0.830 - - - 0.891 0.889 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
99. C8H1orf106 C8H1orf106 2690 2.607 0.781 - - - - 0.926 0.900 - -
100. slc8a2b ENSDARG00000100592 598 2.606 0.820 - - - - 0.860 0.926 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]

There are 2737 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA