Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHKA

Gene Name Gene ID Reads Annotation
CHKA ENSGALG00000036754 5077 choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]











Genes with expression patterns similar to CHKA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHKA ENSGALG00000036754 5077 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
2. RBM45 ENSGALG00000009202 6057 1 - - - - - - 1.000 - - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
3. GATAD2A ENSGALG00000042900 6337 0.999 - - - - - - 0.999 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
4. GALT ENSGALG00000026195 2002 0.999 - - - - - - 0.999 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
5. HSD17B12 ENSGALG00000036787 11748 0.999 - - - - - - 0.999 - - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
6. SLBP ENSGALG00000015712 5586 0.999 - - - - - - 0.999 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
7. UGCG ENSGALG00000015682 2735 0.999 - - - - - - 0.999 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
8. THOC5 ENSGALG00000029223 16069 0.999 - - - - - - 0.999 - - - THO complex 5 [Source:NCBI gene;Acc:417019]
9. TOPBP1 ENSGALG00000034461 3094 0.999 - - - - - - 0.999 - - - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
10. IGDCC3 ENSGALG00000007371 2434 0.999 - - - - - - 0.999 - - - immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
11. APP ENSGALG00000015770 9438 0.999 - - - - - - 0.999 - - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
12. SMPD3 ENSGALG00000034950 4335 0.999 - - - - - - 0.999 - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
13. RALBP1 ENSGALG00000008405 13780 0.999 - - - - - - 0.999 - - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
14. CKAP2 ENSGALG00000017025 25020 0.999 - - - - - - 0.999 - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
15. DEPDC1B ENSGALG00000014729 5334 0.999 - - - - - - 0.999 - - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
16. RBM18 ENSGALG00000028167 10372 0.999 - - - - - - 0.999 - - - RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
17. PLOD2 ENSGALG00000006783 22789 0.998 - - - - - - 0.998 - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
18. IRF6 ENSGALG00000001405 3144 0.998 - - - - - - 0.998 - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
19. UTP15 ENSGALG00000013510 13122 0.998 - - - - - - 0.998 - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
20. DDX1 ENSGALG00000016461 15157 0.998 - - - - - - 0.998 - - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
21. DDOST ENSGALG00000010073 18707 0.997 - - - - - - 0.997 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
22. C1D ENSGALG00000008765 14779 0.997 - - - - - - 0.997 - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
23. C28H19ORF10 C28H19ORF10 16529 0.997 - - - - - - 0.997 - - -
24. YWHAE ENSGALG00000002661 37143 0.995 - - - - - - 0.995 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
25. HECTD3 ENSGALG00000010217 2513 0.993 - - - - - - 0.993 - - - HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
26. LSM7 ENSGALG00000000408 19112 0.99 - - - - - - 0.990 - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
27. BZW2 ENSGALG00000010809 29213 0.986 - - - - - - 0.986 - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
28. NUDCD2 ENSGALG00000001726 6303 0.978 - - - - - - 0.978 - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
29. NDUFA10 ENSGALG00000004302 41948 0.974 - - - - - - 0.974 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
30. ASNS ENSGALG00000009748 11822 0.967 - - - - - - 0.967 - - - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
31. RNF7 ENSGALG00000021117 13110 0.952 - - - - - - 0.952 - - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
32. LDHA ENSGALG00000006300 4796 0.952 - - - - - - - 0.952 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
33. C4BPA ENSGALG00000001175 4278 0.951 - - - - - - - 0.951 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
34. ECI2 ENSGALG00000012809 3692 0.95 - - - - - - - 0.950 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
35. CENPC1 CENPC1 3324 0.949 - - - - - - - 0.949 - -
36. ENSGALG00000001854 ENSGALG00000001854 965 0.949 - - - - - - - 0.949 - -
37. KIAA0930 ENSGALG00000014226 1243 0.948 - - - - - - - 0.948 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
38. ANXA6 ENSGALG00000004357 2891 0.947 - - - - - - - 0.947 - - annexin A6 [Source:NCBI gene;Acc:395481]
39. TRIM62 ENSGALG00000028437 5124 0.945 - - - - - - - 0.945 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
40. SUGT1 ENSGALG00000016946 22881 0.944 - - - - - - 0.944 - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
41. SOX5 ENSGALG00000032768 998 0.944 - - - - - - - 0.944 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
42. II II 929 0.943 - - - - - - - 0.943 - -
43. PHLPP2 ENSGALG00000000875 561 0.942 - - - - - - - 0.942 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
44. CHUK ENSGALG00000003289 5698 0.942 - - - - - - - 0.942 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
45. GPX7 ENSGALG00000010633 7224 0.942 - - - - - - - 0.942 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
46. DSG2 ENSGALG00000015142 67 0.942 - - - - - - - 0.942 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
47. B3GNT7 ENSGALG00000007701 929 0.941 - - - - - - - 0.941 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
48. LOC422106 ENSGALG00000019757 453 0.941 - - - - - - - 0.941 - - uncharacterized LOC422106
49. TES ENSGALG00000031934 5908 0.94 - - - - - - - 0.940 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
50. AMER1 ENSGALG00000007599 994 0.94 - - - - - - - 0.940 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
51. FUBP1 ENSGALG00000008939 2850 0.94 - - - - - - - 0.940 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
52. LAMP2 ENSGALG00000008572 198 0.939 - - - - - - - 0.939 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
53. RIN3 ENSGALG00000010806 729 0.939 - - - - - - - 0.939 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
54. SLC30A2 ENSGALG00000010375 44 0.939 - - - - - - - 0.939 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
55. HSDL1 ENSGALG00000003273 1108 0.938 - - - - - - - 0.938 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
56. SEMA3E ENSGALG00000038225 677 0.938 - - - - - - - 0.938 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
57. PYGL ENSGALG00000012365 4691 0.938 - - - - - - - 0.938 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
58. TM2D3 ENSGALG00000026271 2566 0.938 - - - - - - - 0.938 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
59. EX-FABP EX-FABP 516 0.938 - - - - - - - 0.938 - -
60. SENP5 ENSGALG00000008545 909 0.937 - - - - - - - 0.937 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
61. UBA7 ENSGALG00000036263 2918 0.937 - - - - - - - 0.937 - - ubiquitin-like modifier activating enzyme 7
62. GJB6 ENSGALG00000017136 500 0.937 - - - - - - - 0.937 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
63. SALL1 ENSGALG00000039238 3740 0.937 - - - - - - - 0.937 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
64. TFG ENSGALG00000015299 849 0.936 - - - - - - - 0.936 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
65. SLC25A48 ENSGALG00000006341 2606 0.936 - - - - - - - 0.936 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
66. CWH43 ENSGALG00000041921 68 0.935 - - - - - - - 0.935 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
67. TMEM200A ENSGALG00000002282 77 0.935 - - - - - - - 0.935 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
68. VPS37A ENSGALG00000013646 55 0.935 - - - - - - - 0.935 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
69. GAA ENSGALG00000038853 158 0.935 - - - - - - - 0.935 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
70. ORAI1 ENSGALG00000004240 515 0.935 - - - - - - - 0.935 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
71. LIPG ENSGALG00000043734 2490 0.935 - - - - - - - 0.935 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
72. MDM4 ENSGALG00000000636 91 0.935 - - - - - - - 0.935 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
73. TRMT61B ENSGALG00000008979 615 0.934 - - - - - - - 0.934 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
74. CCDC51 ENSGALG00000006465 1845 0.933 - - - - - - - 0.933 - - coiled-coil domain containing 51, transcript variant X1
75. RASGEF1A ENSGALG00000002525 918 0.933 - - - - - - - 0.933 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
76. TOX ENSGALG00000039102 1434 0.933 - - - - - - - 0.933 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
77. FA2H ENSGALG00000002775 396 0.933 - - - - - - - 0.933 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
78. HDAC4 ENSGALG00000004288 2124 0.933 - - - - - - - 0.933 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
79. ENSGALG00000016572 ENSGALG00000016572 79 0.933 - - - - - - - 0.933 - -
80. DNAJC11 ENSGALG00000000627 769 0.933 - - - - - - - 0.933 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
81. YARS2 503 0.932 - - - - - - - 0.932 - - tyrosyl-tRNA synthetase 2
82. EDA ENSGALG00000035966 602 0.932 - - - - - - - 0.932 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
83. ABCB10 ENSGALG00000011096 1407 0.932 - - - - - - - 0.932 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
84. PAMR1 ENSGALG00000007886 928 0.932 - - - - - - - 0.932 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
85. ARAP2 ENSGALG00000041373 233 0.931 - - - - - - - 0.931 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
86. CASP7 ENSGALG00000008933 506 0.931 - - - - - - - 0.931 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
87. HSPA13 ENSGALG00000019201 712 0.931 - - - - - - - 0.931 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
88. H4-I H4-I 2327 0.93 - - - - - - - 0.930 - -
89. MAPKKK3L ENSGALG00000005884 1011 0.93 - - - - - - - 0.930 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
90. CLUH ENSGALG00000005854 2100 0.929 - - - - - - - 0.929 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
91. PINK1 ENSGALG00000037593 3794 0.929 - - - - - - - 0.929 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
92. GADD45 GADD45 8780 0.929 - - - - - - - 0.929 - -
93. ISCA2 ENSGALG00000020417 1130 0.929 - - - - - - - 0.929 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
94. MSRB1 ENSGALG00000005414 4197 0.928 - - - - - - - 0.928 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
95. CECR5L ENSGALG00000005020 116 0.928 - - - - - - - 0.928 - - cat eye syndrome chromosome region, candidate 5-like
96. SEC11C ENSGALG00000031663 4266 0.927 - - - - - - - 0.927 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
97. COL6A2 ENSGALG00000039216 892 0.926 - - - - - - - 0.926 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
98. LRRC45 ENSGALG00000002877 1751 0.924 - - - - - - - 0.924 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
99. MRC1 ENSGALG00000008629 259 0.923 - - - - - - - 0.923 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
100. ZBTB26 ENSGALG00000042762 1920 0.923 - - - - - - - 0.923 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]

There are 163 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA