Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHGB

Gene Name Gene ID Reads Annotation
CHGB ENSGALG00000046616 357 chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]











Genes with expression patterns similar to CHGB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHGB ENSGALG00000046616 357 8 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
2. USH1C ENSGALG00000006192 63 1.558 - - - - 0.768 - - 0.790 - - USH1 protein network component harmonin [Source:HGNC Symbol;Acc:HGNC:12597]
3. HECTD2 ENSGALG00000038043 177 0.998 - - - - - - - 0.998 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
4. ZP1 ENSGALG00000031916 122 0.998 - - - - - - - 0.998 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
5. BBS9 ENSGALG00000031650 13 0.977 - - - - - - - 0.977 - - Bardet-Biedl syndrome 9, transcript variant X5
6. snoZ39 snoZ39 2 0.948 - - - - - - - 0.948 - -
7. DBN1 ENSGALG00000033405 216 0.948 - - - - - - - 0.948 - - drebrin 1 [Source:NCBI gene;Acc:396496]
8. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.948 - - - - - - - 0.948 - - family with sequence similarity 214 member B, transcript variant X14
9. ALKBH3 ENSGALG00000041309 7 0.948 - - - - - - - 0.948 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
10. GTPBP6 ENSGALG00000016717 17 0.948 - - - - - - - 0.948 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
11. MUC13 7 0.948 - - - - - - - 0.948 - - mucin 13, cell surface associated, transcript variant X10
12. GABRA5 ENSGALG00000016744 12 0.948 - - - - - - - 0.948 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
13. ENSGALG00000023027 ENSGALG00000023027 5 0.948 - - - - - - - 0.948 - -
14. SPATA4 ENSGALG00000010822 4 0.948 - - - - - - - 0.948 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
15. ACACB 6 0.948 - - - - - - - 0.948 - - acetyl-CoA carboxylase beta
16. TREM-B1 ENSGALG00000003361 8 0.948 - - - - - - - 0.948 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
17. SFT2D2 ENSGALG00000019228 10 0.948 - - - - - - - 0.948 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
18. C1orf228 3 0.948 - - - - - - - 0.948 - - chromosome 1 open reading frame 228, transcript variant X5
19. GPR17 ENSGALG00000037153 3 0.948 - - - - - - - 0.948 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
20. SUSD1 ENSGALG00000015677 12 0.948 - - - - - - - 0.948 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
21. SOX10 ENSGALG00000012290 3942 0.948 - - - - - - - 0.948 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
22. ENSGALG00000028652 ENSGALG00000028652 65 0.948 - - - - - - - 0.948 - -
23. HBP1 ENSGALG00000008050 19 0.948 - - - - - - - 0.948 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
24. SLC30A8 ENSGALG00000034377 3 0.948 - - - - - - - 0.948 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
25. CD101 12 0.948 - - - - - - - 0.948 - - CD101 molecule, transcript variant X4
26. ENSGALG00000023353 ENSGALG00000023353 1 0.948 - - - - - - - 0.948 - -
27. CDHR1 ENSGALG00000002314 24 0.948 - - - - - - - 0.948 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
28. GP5 ENSGALG00000045125 3 0.948 - - - - - - - 0.948 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
29. GSAP ENSGALG00000008312 12 0.948 - - - - - - - 0.948 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
30. INSC ENSGALG00000032558 74 0.947 - - - - - - - 0.947 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
31. PRKRIR PRKRIR 46 0.947 - - - - - - - 0.947 - -
32. SWAP70 ENSGALG00000005750 32 0.944 - - - - - - - 0.944 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
33. GABRA2 ENSGALG00000014206 19 0.941 - - - - - - - 0.941 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
34. MAP3K13 ENSGALG00000006655 632 0.933 - - - - - - - 0.933 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
35. PTBP3 ENSGALG00000015669 16 0.931 - - - - - - - 0.931 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
36. TOM1L2 ENSGALG00000004902 89 0.925 - - - - - - - 0.925 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
37. NMRAL1 ENSGALG00000029820 29 0.925 - - - - - - - 0.925 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
38. SRRL ENSGALG00000002638 26 0.925 - - - - - - - 0.925 - - serine racemase-like, transcript variant X8
39. URB2 ENSGALG00000011101 12 0.908 - - - - - - - 0.908 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
40. ENSGALG00000020972 ENSGALG00000020972 54 0.902 - - - - - - - 0.902 - -
41. PWWP2B ENSGALG00000010491 30 0.9 - - - - - - - 0.900 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
42. RAD54L2 ENSGALG00000003243 187 0.896 - - - - - - - 0.896 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
43. RAB43 ENSGALG00000005021 5 0.894 - - - - - - - 0.894 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
44. BFIV21 BFIV21 30 0.893 - - - - - - - 0.893 - -
45. ZNF507 ENSGALG00000004532 78 0.893 - - - - - - - 0.893 - - zinc finger protein 507, transcript variant X2
46. PTPRQ ENSGALG00000010935 626 0.87 - - - - - - - 0.870 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
47. ENSGALG00000026756 ENSGALG00000026756 134 0.87 - - - - - - - 0.870 - -
48. FRS2 ENSGALG00000009966 63 0.862 - - - - - 0.862 - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
49. KCNT2 ENSGALG00000041680 36 0.857 - - - - - 0.857 - - - - potassium sodium-activated channel subfamily T member 2 [Source:HGNC Symbol;Acc:HGNC:18866]
50. IQUB ENSGALG00000008823 65 0.856 - - - - - - - 0.856 - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
51. IKZF1 ENSGALG00000013086 58 0.854 - - - - - - - 0.854 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
52. CLEC18B ENSGALG00000027183 284 0.849 - - - - - - - 0.849 - - C-type lectin domain family 18 member B, transcript variant X2
53. LOC416530 ENSGALG00000005291 207 0.849 - - - - - - - 0.849 - - uncharacterized LOC416530, transcript variant X1
54. ENSGALG00000023735 ENSGALG00000023735 12 0.849 - - - - - - - 0.849 - -
55. SSBP2 ENSGALG00000023089 131 0.843 - - - - - - - 0.843 - - single stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15831]
56. GAL ENSGALG00000007047 606 0.84 - - - - - - - - - 0.840 galanin and GMAP prepropeptide [Source:NCBI gene;Acc:423117]
57. gga-mir-2954 ENSGALG00000026107 462 0.835 - - - - - - - 0.835 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
58. ECSCR ENSGALG00000024379 313 0.835 - - - - - - - 0.835 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
59. FANCF ENSGALG00000003660 25 0.83 - - - - - - - 0.830 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
60. WNT4 ENSGALG00000041708 1277 0.828 - - - - - - - 0.828 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
61. UPRT ENSGALG00000007793 321 0.823 - - - - - - - 0.823 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
62. C15orf61 ENSGALG00000028141 56 0.822 - - - - - - - 0.822 - - chromosome 15 open reading frame 61 [Source:NCBI gene;Acc:101747767]
63. MLH3 ENSGALG00000010304 231 0.822 - - - - - - - 0.822 - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
64. TRABD2A ENSGALG00000026395 704 0.818 - - - - - - - 0.818 - - TraB domain containing 2A, transcript variant X3
65. LHFP 167 0.808 - - - - - - - 0.808 - - lipoma HMGIC fusion partner
66. S100A4 ENSGALG00000037599 280 0.808 - - - - - - - 0.808 - - S100 calcium binding protein A4
67. ELFN1 ENSGALG00000004209 114 0.789 - - - - - - - 0.789 - - extracellular leucine rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33154]
68. CHGA ENSGALG00000010820 1028 0.788 - - - - - - - - - 0.788 chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
69. USP48 ENSGALG00000030857 471 0.785 - - - - - - - 0.785 - - ubiquitin specific peptidase 48 [Source:NCBI gene;Acc:769457]
70. NOV ENSGALG00000038364 190 0.783 - - - - - - - - - 0.783 nephroblastoma overexpressed [Source:NCBI gene;Acc:396204]
71. CA5B ENSGALG00000005855 172 0.781 - - - - - - - 0.781 - - carbonic anhydrase 5B [Source:HGNC Symbol;Acc:HGNC:1378]
72. PDZRN4 ENSGALG00000009530 832 0.78 - - - - - - - 0.780 - - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
73. PER3 ENSGALG00000000573 590 0.776 - - - - - - - - - 0.776 period circadian clock 3 [Source:NCBI gene;Acc:419366]
74. DACH2 ENSGALG00000006886 426 0.776 - - - - - 0.776 - - - - dachshund family transcription factor 2 [Source:NCBI gene;Acc:395576]
75. MARVELD3 ENSGALG00000012886 155 0.775 - - - - - - - 0.775 - - MARVEL domain containing 3
76. CDK5RAP3 ENSGALG00000036452 693 0.774 - - - - - - - 0.774 - - CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]
77. HDAC11 ENSGALG00000005092 176 0.773 - - 0.773 - - - - - - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
78. DHRSX ENSGALG00000016681 866 0.772 - - - - - - - - 0.772 - dehydrogenase/reductase X-linked [Source:HGNC Symbol;Acc:HGNC:18399]
79. DSEL ENSGALG00000042505 92 0.772 - - - - - - - 0.772 - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
80. GREB1L ENSGALG00000014935 88 0.764 - - - - - 0.764 - - - - GREB1 like retinoic acid receptor coactivator [Source:HGNC Symbol;Acc:HGNC:31042]
81. ALOX5 ENSGALG00000005857 73 0.763 - - - - - - - 0.763 - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
82. LITAF ENSGALG00000003217 7 0.762 - - - - - - - 0.762 - - lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
83. PROCA1 668 0.762 - - - - - - - 0.762 - - protein interacting with cyclin A1
84. CPEB4 ENSGALG00000033512 779 0.757 - - - - - - - 0.757 - - cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]
85. KHDRBS2 ENSGALG00000016276 110 0.756 - - - - - - - 0.756 - - KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
86. DDC ENSGALG00000013094 230 0.755 - - - - - - - - - 0.755 dopa decarboxylase [Source:HGNC Symbol;Acc:HGNC:2719]
87. LRRC58 ENSGALG00000033186 15 0.753 - - - - - - - 0.753 - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
88. TBC1D8B ENSGALG00000009040 75 0.753 - - - - - - - 0.753 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
89. HNF4G ENSGALG00000042621 484 0.747 - - - - - - - 0.747 - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
90. VSTM4 ENSGALG00000006174 98 0.737 - - - - - - - - - 0.737 V-set and transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26470]
91. LOC416622 ENSGALG00000007030 30 0.735 - - - - 0.735 - - - - - transmembrane protein 180-like, transcript variant X8
92. UBN2 ENSGALG00000011854 133 0.734 - - - - - - - 0.734 - - ubinuclein 2 [Source:NCBI gene;Acc:417970]
93. ISOC1 ENSGALG00000000161 46 0.732 - - - - - - - 0.732 - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
94. A1CF ENSGALG00000003765 36 0.731 - - - - - - - 0.731 - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
95. ENSGALG00000017691 ENSGALG00000017691 48 0.73 - - - - - - - 0.730 - -
96. SCN5A ENSGALG00000006112 137 0.727 - - - - - - - 0.727 - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
97. ABCA2 ENSGALG00000036894 12 0.725 - - - - - - - 0.725 - - ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]
98. HOXB9 ENSGALG00000001276 55 0.721 - - - - - - - - - 0.721 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
99. RBM33 ENSGALG00000006372 95 0.721 - - - - - 0.721 - - - - RNA binding motif protein 33 [Source:HGNC Symbol;Acc:HGNC:27223]
100. TEX11 ENSGALG00000005775 58 0.719 - - - - - 0.719 - - - - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]

There are 9 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA