Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHGA

Gene Name Gene ID Reads Annotation
CHGA ENSGALG00000010820 1028 chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]











Genes with expression patterns similar to CHGA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHGA ENSGALG00000010820 1028 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
2. RALGAPA2 240 2.535 - - 0.946 - - - 0.847 - 0.742 - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
3. LRRC42 ENSGALG00000010743 384 1.981 - - 0.984 - - - - 0.997 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
4. SZT2 ENSGALG00000028561 255 1.98 - - 0.984 - - - - 0.996 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
5. ZC3H11A ENSGALG00000000541 2712 1.87 - - 0.880 - - - - 0.990 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
6. ST14 ENSGALG00000001331 1655 1.85 - - 0.880 - - - - 0.970 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
7. WBP4 ENSGALG00000016949 5858 1.846 - - 0.865 - - - - 0.981 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
8. CCNI ENSGALG00000011457 3203 1.793 - - 0.803 - - - - 0.990 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
9. BRF1 ENSGALG00000011705 3406 1.786 - - 0.826 - - - - 0.960 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
10. TFAP2C ENSGALG00000007690 768 1.782 - - 0.937 - - - 0.845 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
11. HOXA7 ENSGALG00000026989 6746 1.747 - - 0.960 - - - - 0.787 - - homeobox A7 [Source:NCBI gene;Acc:395290]
12. WDR92 ENSGALG00000008760 3934 1.741 - - 0.971 - - - - - 0.770 - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
13. POGZ ENSGALG00000036365 4056 1.735 - - 0.886 - - - - - 0.849 - pogo transposable element with ZNF domain, transcript variant X2
14. LRRC71 ENSGALG00000027351 695 1.698 - - 0.982 - - - - - 0.716 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
15. GDPD4 ENSGALG00000000690 824 1.687 - - 0.979 - - 0.708 - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
16. DCP1B 1306 1.684 - - 0.940 - - - - - 0.744 - decapping mRNA 1B
17. YBX3 ENSGALG00000031890 819 1.683 - - 0.955 - - - - - 0.728 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
18. ATP6V1E1 ENSGALG00000013036 13497 1.67 - - 0.888 - - - - 0.782 - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
19. MIB1 ENSGALG00000014974 3583 1.653 - - 0.947 - - - - - 0.706 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
20. ZDHHC7 ENSGALG00000042522 1774 1.639 - - 0.914 - - - - - 0.725 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
21. RBBP8 ENSGALG00000014982 3255 1.633 - - 0.866 - - - - - 0.767 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
22. DPM2 ENSGALG00000005066 9121 1.615 - - - - - - 0.721 0.894 - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
23. WTAP ENSGALG00000011660 10811 1.593 - - 0.857 - - - - - 0.736 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
24. PTPRZ1 ENSGALG00000040114 3410 1.587 - - - 0.765 - 0.822 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
25. CRABP-I ENSGALG00000003193 67258 1.58 - - - 0.810 - 0.770 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
26. HES5 ENSGALG00000001141 6514 1.569 - - - 0.782 - 0.787 - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
27. PGS1 ENSGALG00000007181 3187 1.567 - - 0.808 - - - - - 0.759 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
28. CKB ENSGALG00000011511 2100 1.563 - - - - - 0.774 0.789 - - - creatine kinase B [Source:NCBI gene;Acc:396248]
29. ELAVL4 ENSGALG00000010533 4978 1.542 - - 0.770 0.772 - - - - - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
30. NFASC ENSGALG00000031776 4264 1.535 - - - 0.835 - 0.700 - - - - neurofascin [Source:NCBI gene;Acc:419824]
31. NR2C1 ENSGALG00000011327 5109 1.533 - - 0.797 - - - 0.736 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
32. FAM47E-STBD1 FAM47E-STBD1 1148 1.518 - - - - - - 0.814 - 0.704 -
33. NEFL ENSGALG00000000314 4883 1.502 - - - 0.741 - 0.761 - - - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
34. HOXB-7 HOXB-7 2066 1.5 - - - 0.727 - - 0.773 - - -
35. ENSGALG00000027373 ENSGALG00000027373 2129 1.496 - - - 0.741 - 0.755 - - - -
36. SLC1A3 ENSGALG00000003582 2283 1.491 - - - - - 0.714 0.777 - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
37. CSPG5 ENSGALG00000032184 991 1.483 - - - 0.737 0.746 - - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
38. UBE2Q2 3861 1.483 - - - - - - 0.710 - 0.773 - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
39. ANXA8 ENSGALG00000005956 479 1.479 - - 0.712 - - - 0.767 - - - annexin A8, transcript variant X1
40. LASP-2 LASP-2 4415 1.479 - - - - - 0.728 0.751 - - -
41. CERCAM ENSGALG00000004986 5158 1.475 - - - 0.753 - 0.722 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
42. DLL1 ENSGALG00000011182 1613 1.472 - - - 0.768 - 0.704 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
43. MARCKSL1 ENSGALG00000032335 88728 1.47 - - - 0.715 - 0.755 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
44. CHL1 ENSGALG00000037856 1565 1.458 - - - 0.729 - 0.729 - - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
45. FAM171B ENSGALG00000002646 837 1.435 - - 0.709 - - - - - 0.726 - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
46. SMARCA5 ENSGALG00000009913 20059 1.432 - - 0.704 - - - - 0.728 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
47. IRX1 ENSGALG00000030991 1474 1.429 - - - - - 0.700 0.729 - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
48. RFX3 ENSGALG00000010179 305 1 - - - - - - - 1.000 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
49. ZNF148 ENSGALG00000012049 365 1 - - - - - - - 1.000 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
50. AGO1 ENSGALG00000002249 125 1 - - - - - - - 1.000 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
51. FRYL ENSGALG00000014103 314 1 - - - - - - - 1.000 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
52. ENSGALG00000021835 ENSGALG00000021835 424 1 - - - - - - - 1.000 - -
53. PRKAG2 ENSGALG00000006219 504 0.999 - - - - - - - 0.999 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
54. gga-mir-6681 ENSGALG00000027840 546 0.999 - - - - - - - 0.999 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
55. GMFB ENSGALG00000012208 894 0.998 - - - - - - - 0.998 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
56. ENSGALG00000026309 ENSGALG00000026309 360 0.998 - - - - - - - 0.998 - -
57. BIN1 ENSGALG00000011541 2273 0.998 - - - - - - - 0.998 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
58. ENSGALG00000016701 ENSGALG00000016701 418 0.998 - - - - - - - 0.998 - -
59. CLEC3B ENSGALG00000030969 363 0.998 - - - - - - - 0.998 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
60. NGFR ENSGALG00000035950 13452 0.998 - - - - - - - 0.998 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
61. N4BP2L1 ENSGALG00000017072 1371 0.997 - - - - - - - 0.997 - - NEDD4 binding protein 2 like 1, transcript variant X2
62. xcc-b100_1894L ENSGALG00000007564 462 0.997 - - - - - - - 0.997 - - UPF0061 protein xcc-b100_1894-like
63. GHR_1 ENSGALG00000014855 198 0.996 - - - - - - - 0.996 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
64. C16orf93 C16orf93 3351 0.996 - - - - - - - 0.996 - -
65. LMO4 ENSGALG00000006252 3686 0.994 - - - - - - - 0.994 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
66. TBC1D16 ENSGALG00000007054 2324 0.993 - - - - - - - 0.993 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
67. ENSGALG00000025773 ENSGALG00000025773 977 0.992 - - - - - - - 0.992 - -
68. ALDH6 ALDH6 771 0.992 - - - - - - - 0.992 - -
69. GPR155 ENSGALG00000014209 1281 0.991 - - - - - - - 0.991 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
70. YY1 ENSGALG00000017388 1933 0.991 - - - - - - - 0.991 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
71. SENP2 ENSGALG00000031128 1162 0.99 - - - - - - - 0.990 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
72. C7H2ORF76 ENSGALG00000012113 1947 0.989 - - - - - - - 0.989 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
73. MAN1A1 ENSGALG00000014878 1061 0.989 - - - - - - - 0.989 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
74. TBC1D19 ENSGALG00000029673 1868 0.989 - - - - - - - 0.989 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
75. PNPT1 ENSGALG00000043545 1306 0.989 - - - - - - - 0.989 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
76. SIAH2 ENSGALG00000010395 2126 0.988 - - - - - - - 0.988 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
77. BOC ENSGALG00000015152 4868 0.988 - - - - - - - 0.988 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
78. THAP4 ENSGALG00000006283 1707 0.988 - - - - - - - 0.988 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
79. IBA57 ENSGALG00000005328 4362 0.988 - - - - - - - 0.988 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
80. SLC37A4 ENSGALG00000007716 2263 0.988 - - - - - - - 0.988 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
81. CDC37L1 ENSGALG00000014448 2283 0.987 - - - - - - - 0.987 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
82. SLC4A3 ENSGALG00000011224 2161 0.986 - - - - - - - 0.986 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
83. UEVLD ENSGALG00000006342 164 0.984 - - 0.984 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
84. ATP6V0E2 ENSGALG00000020754 2648 0.984 - - - - - - - 0.984 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
85. MED20 ENSGALG00000003474 4583 0.984 - - - - - - - 0.984 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
86. MRC2 ENSGALG00000000461 48 0.983 - - 0.983 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
87. COQ5 ENSGALG00000007185 5614 0.983 - - - - - - - 0.983 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
88. ENSGALG00000020103 ENSGALG00000020103 64 0.983 - - 0.983 - - - - - - -
89. ENSGALG00000028964 ENSGALG00000028964 46 0.983 - - 0.983 - - - - - - -
90. TDRD6 48 0.983 - - 0.983 - - - - - - - tudor domain containing 6
91. ITGB4 ENSGALG00000002389 44 0.983 - - 0.983 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
92. TCTN2 ENSGALG00000023683 3596 0.983 - - 0.983 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
93. CDC14B ENSGALG00000012627 110 0.982 - - 0.982 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
94. FBXL5 ENSGALG00000014510 245 0.982 - - 0.982 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
95. OSGIN2 ENSGALG00000042840 83 0.982 - - 0.982 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
96. U4 U4 69 0.982 - - 0.982 - - - - - - -
97. RQCD1 RQCD1 110 0.982 - - 0.982 - - - - - - -
98. ASAP2 ENSGALG00000016419 1393 0.982 - - - - - - - 0.982 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
99. MED12 ENSGALG00000036322 814 0.982 - - 0.982 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
100. CLEC16A ENSGALG00000007167 66 0.981 - - 0.981 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]

There are 841 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA