Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHFR

Gene Name Gene ID Reads Annotation
CHFR ENSGALG00000002180 17 checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]











Genes with expression patterns similar to CHFR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHFR ENSGALG00000002180 17 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
2. TTC36 ENSGALG00000006812 63 1.776 - - - - - 0.975 - 0.801 - - tetratricopeptide repeat domain 36 [Source:NCBI gene;Acc:419757]
3. GP130 GP130 42 1 - - - - - 1.000 - - - -
4. SMAD9 ENSGALG00000017050 11 1 - - - - - - - 1.000 - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
5. ADRA2C ENSGALG00000015608 42 1 - - - - - - - 1.000 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
6. ATP6V1A ENSGALG00000014800 4 0.999 - - - - - - - 0.999 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
7. CCDC39 ENSGALG00000021855 23 0.999 - - - - - - - 0.999 - - coiled-coil domain containing 39
8. MLNR ENSGALG00000017003 10 0.999 - - - - - - - 0.999 - - motilin receptor [Source:NCBI gene;Acc:428072]
9. C9orf152 C9orf152 3 0.999 - - - - - - - 0.999 - -
10. C9ORF9 C9ORF9 13 0.986 - - - - - - - 0.986 - -
11. MCF2 ENSGALG00000006562 59 0.979 - - - - - - - 0.979 - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
12. ABCB11 ENSGALG00000010891 24 0.978 - - - - - - - 0.978 - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
13. NMRK2 ENSGALG00000025751 57 0.973 - - - - - - - 0.973 - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
14. TRPA1 ENSGALG00000034751 148 0.968 - - - - - - - 0.968 - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
15. CCDC147 CCDC147 53 0.967 - - - - - - - 0.967 - -
16. CHRM2 ENSGALG00000012894 21 0.967 - - - - - - - 0.967 - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
17. RAMP1 ENSGALG00000003821 389 0.963 - - - - - - - 0.963 - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
18. WBP2NL ENSGALG00000011908 23 0.963 - - - - 0.963 - - - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
19. TICRR ENSGALG00000006631 495 0.962 - - - - - - - 0.962 - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
20. PDPR ENSGALG00000002690 45 0.944 - - - - - - - 0.944 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
21. CPAMD8 ENSGALG00000003742 151 0.938 - - - - - - - 0.938 - - C3 and PZP like, alpha-2-macroglobulin domain containing 8, transcript variant X3
22. CRAT ENSGALG00000037443 78 0.936 - - - - - - - 0.936 - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
23. ASTE1 ENSGALG00000036171 155 0.935 - - - - - - - 0.935 - - asteroid homolog 1 (Drosophila), transcript variant X3
24. EFHC1 ENSGALG00000016674 14 0.934 - - - - - 0.934 - - - - EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16406]
25. SGIP1 ENSGALG00000011113 20 0.934 - - - - - - - 0.934 - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
26. TSPAN14 ENSGALG00000002414 69 0.933 - - - - - - - 0.933 - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
27. LAMP1 ENSGALG00000037697 247 0.933 - - - - - - - 0.933 - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
28. ENSGALG00000019896 ENSGALG00000019896 3 0.925 - - - - - - - 0.925 - -
29. ENSGALG00000014141 ENSGALG00000014141 3 0.923 - - - - - - 0.923 - - -
30. LCMT2 ENSGALG00000017333 207 0.923 - - - - - - 0.923 - - - leucine carboxyl methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:17558]
31. C4orf48 C4orf48 255 0.914 - - - - - - - 0.914 - -
32. CHADL ENSGALG00000011970 42 0.909 - - - - - - - 0.909 - - chondroadherin-like [Source:NCBI gene;Acc:417998]
33. HPCAL4 ENSGALG00000003829 75 0.907 - - - - - - - 0.907 - - hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
34. RGS7 ENSGALG00000039772 69 0.906 - - - - - 0.906 - - - - regulator of G-protein signaling 7 [Source:NCBI gene;Acc:395620]
35. NBEAL2 ENSGALG00000039120 277 0.903 - - - - 0.903 - - - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
36. PCNXL4 PCNXL4 58 0.902 - - - - - - - 0.902 - -
37. MAPKAPK3 ENSGALG00000002283 30 0.897 - - - - - - - 0.897 - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
38. USP13 ENSGALG00000008909 8 0.888 - - - - - 0.888 - - - - ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:NCBI gene;Acc:429286]
39. WARS ENSGALG00000011228 193 0.879 - - - - - - - 0.879 - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
40. RGS19 ENSGALG00000021079 1 0.878 - - 0.878 - - - - - - - regulator of G protein signaling 19 [Source:NCBI gene;Acc:374070]
41. MLC1 ENSGALG00000040038 206 0.877 - - - - - 0.877 - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
42. CAPN2 ENSGALG00000009360 8 0.877 - - - - - 0.877 - - - - calpain 2 [Source:NCBI gene;Acc:395963]
43. ADPGK ENSGALG00000001788 208 0.872 - - - - - - - 0.872 - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
44. STEAP1 ENSGALG00000009006 16 0.87 - - - - - - - 0.870 - - STEAP family member 1
45. RCAN2 ENSGALG00000016709 8 0.868 - - - - - - - - - 0.868 regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
46. ENSGALG00000002522 ENSGALG00000002522 21 0.863 - - - - - - - - - 0.863
47. ENSGALG00000001629 ENSGALG00000001629 31 0.863 - - - - - - - 0.863 - -
48. MASP2 ENSGALG00000003016 35 0.861 - - - - - - - 0.861 - - mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
49. ENSGALG00000017013 ENSGALG00000017013 286 0.861 - - - - - - - 0.861 - -
50. ENSGALG00000023475 ENSGALG00000023475 19 0.859 - - 0.859 - - - - - - -
51. DAPK1 ENSGALG00000012608 17 0.857 - - - - - - - 0.857 - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
52. SFT2D2 ENSGALG00000019228 10 0.852 - - 0.852 - - - - - - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
53. CASP18 ENSGALG00000008346 23 0.85 - - - - - - - 0.850 - - initiator caspase [Source:NCBI gene;Acc:693266]
54. RANBP17 47 0.84 - - - - - - - 0.840 - - RAN binding protein 17
55. BATF ENSGALG00000010323 96 0.838 - - - - - - - 0.838 - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
56. SPINK4 ENSGALG00000043964 50 0.833 - - - - - - 0.833 - - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
57. ACAN ENSGALG00000006725 184 0.83 - - - - - - 0.830 - - - aggrecan [Source:NCBI gene;Acc:395798]
58. C10orf67 15 0.827 - - 0.827 - - - - - - - chromosome 10 open reading frame 67, transcript variant X2
59. RRAD ENSGALG00000005140 183 0.827 - - - - - - 0.827 - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
60. TSSK3 4 0.821 - - 0.821 - - - - - - - testis specific serine kinase 3
61. NEU2 ENSGALG00000037467 34 0.815 - - - - - - - 0.815 - - neuraminidase 2 [Source:HGNC Symbol;Acc:HGNC:7759]
62. SDSL ENSGALG00000008317 55 0.815 - - - - - - - 0.815 - - serine dehydratase like [Source:NCBI gene;Acc:417030]
63. GDPD2 ENSGALG00000005842 86 0.813 - - - - 0.813 - - - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974]
64. FIGF FIGF 576 0.812 - - - - - 0.812 - - - -
65. MAF ENSGALG00000026258 45 0.811 - - - - - - - - - 0.811 MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
66. C1QTNF5 ENSGALG00000006758 241 0.809 - - - - - - - 0.809 - - C1q and TNF related 5 [Source:HGNC Symbol;Acc:HGNC:14344]
67. ENSGALG00000011273 ENSGALG00000011273 9 0.808 - - - - - - - 0.808 - -
68. EF1A EF1A 2378 0.802 - - - - - - - 0.802 - -
69. RMST_1 RMST_1 1 0.794 - - 0.794 - - - - - - -
70. SNORA28 SNORA28 12 0.794 - - 0.794 - - - - - - -
71. ENSGALG00000026256 ENSGALG00000026256 3 0.794 - - 0.794 - - - - - - -
72. GREM2 ENSGALG00000010773 1 0.794 - - 0.794 - - - - - - - gremlin 2, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:17655]
73. ENSGALG00000005427 ENSGALG00000005427 4 0.794 - - 0.794 - - - - - - -
74. CRCBL ENSGALG00000025881 3 0.794 - - 0.794 - - - - - - - cytokine receptor common subunit beta-like, transcript variant X3
75. GGACT ENSGALG00000022758 1 0.794 - - 0.794 - - - - - - - gamma-glutamylamine cyclotransferase [Source:HGNC Symbol;Acc:HGNC:25100]
76. FAM237A ENSGALG00000020836 21 0.794 - - 0.794 - - - - - - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
77. RAD21L1 ENSGALG00000006186 2 0.794 - - 0.794 - - - - - - - RAD21 cohesin complex component like 1 [Source:HGNC Symbol;Acc:HGNC:16271]
78. HTR1A ENSGALG00000014742 2 0.794 - - 0.794 - - - - - - - 5-hydroxytryptamine receptor 1A [Source:NCBI gene;Acc:431581]
79. LRRIQ4 ENSGALG00000009397 1 0.794 - - 0.794 - - - - - - - leucine rich repeats and IQ motif containing 4, transcript variant X2
80. TMC2 ENSGALG00000042706 1 0.794 - - 0.794 - - - - - - - transmembrane channel like 2 [Source:NCBI gene;Acc:428456]
81. SHC3 ENSGALG00000010688 1 0.794 - - 0.794 - - - - - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
82. KLHDC10 ENSGALG00000008013 4 0.794 - - 0.794 - - - - - - - kelch domain containing 10 [Source:HGNC Symbol;Acc:HGNC:22194]
83. PAQR5 ENSGALG00000008077 1 0.794 - - 0.794 - - - - - - - progestin and adipoQ receptor family member 5 [Source:HGNC Symbol;Acc:HGNC:29645]
84. EPSTI1 ENSGALG00000016964 6 0.794 - - 0.794 - - - - - - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
85. LOC421584 ENSGALG00000011579 8 0.794 - - 0.794 - - - - - - - solute carrier family 22 member 2-like
86. SEMA5A ENSGALG00000028685 6 0.794 - - 0.794 - - - - - - - semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]
87. SS2R SS2R 3 0.794 - - 0.794 - - - - - - -
88. PIFO ENSGALG00000023763 11 0.794 - - 0.794 - - - - - - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
89. ARSE ENSGALG00000016654 8 0.794 - - 0.794 - - - - - - - arylsulfatase E (chondrodysplasia punctata 1), transcript variant X2
90. NAMA NAMA 1 0.794 - - 0.794 - - - - - - -
91. SNORD83 SNORD83 1 0.794 - - 0.794 - - - - - - -
92. ENSGALG00000015793 ENSGALG00000015793 12 0.794 - - 0.794 - - - - - - -
93. B-G B-G 2 0.794 - - 0.794 - - - - - - -
94. SLC13A1 ENSGALG00000008874 2 0.794 - - 0.794 - - - - - - - solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
95. TMEM233 ENSGALG00000020975 1 0.794 - - 0.794 - - - - - - - transmembrane protein 233 [Source:HGNC Symbol;Acc:HGNC:37219]
96. CCDC122 ENSGALG00000016968 5 0.794 - - 0.794 - - - - - - - coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
97. TH ENSGALG00000029648 2 0.794 - - 0.794 - - - - - - - tyrosine hydroxylase [Source:NCBI gene;Acc:395592]
98. KCNH8 ENSGALG00000011262 1 0.794 - - 0.794 - - - - - - - potassium voltage-gated channel subfamily H member 8 [Source:HGNC Symbol;Acc:HGNC:18864]
99. CA15L ENSGALG00000005896 4 0.794 - - 0.794 - - - - - - - carbonic anhydrase 15-like
100. SLC26A1 ENSGALG00000027423 1 0.794 - - 0.794 - - - - - - - solute carrier family 26 member 1 [Source:HGNC Symbol;Acc:HGNC:10993]

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA