Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHERP

Gene Name Gene ID Reads Annotation
CHERP ENSGALG00000003824 11489 calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]











Genes with expression patterns similar to CHERP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHERP ENSGALG00000003824 11489 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
2. EIF3J ENSGALG00000008187 43570 1.53 - - - - - - 0.812 0.718 - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
3. POLR2E ENSGALG00000002591 26405 0.999 - - - - - - 0.999 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
4. PLOD2 ENSGALG00000006783 22789 0.965 - - - - - - - 0.965 - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
5. RBM19 ENSGALG00000008289 10702 0.923 - - - - - - - 0.923 - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
6. LARP7 ENSGALG00000012048 8393 0.906 - - - - - - - 0.906 - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
7. USP20 ENSGALG00000041104 3186 0.904 - - - - - - - 0.904 - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
8. OGG1 ENSGALG00000006651 1320 0.903 - - - - - - - 0.903 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
9. ENSGALG00000023314 ENSGALG00000023314 6331 0.903 - - - - - - - 0.903 - -
10. GPR180 ENSGALG00000016897 1545 0.903 - - - - - - - 0.903 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
11. RNF19A ENSGALG00000038772 380 0.903 - - - - - - - 0.903 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
12. SORD ENSGALG00000031408 2119 0.903 - - - - - - - 0.903 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
13. MYL2 ENSGALG00000004582 2245 0.903 - - - - - - - 0.903 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
14. H1F0 ENSGALG00000044240 1206 0.903 - - - - - - - 0.903 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
15. MAMLD1 ENSGALG00000009098 1231 0.903 - - - - - - - 0.903 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
16. RAD18 ENSGALG00000008368 7214 0.902 - - - - - - - 0.902 - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
17. ROR1 ENSGALG00000011019 2155 0.902 - - - - - - - 0.902 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
18. ARL6IP4 ENSGALG00000003682 2467 0.902 - - - - - - - 0.902 - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
19. CDC26 ENSGALG00000026095 3491 0.902 - - - - - - - 0.902 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
20. XRCC2 ENSGALG00000026865 2214 0.902 - - - - - - - 0.902 - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
21. XPNPEP3 ENSGALG00000012003 2253 0.901 - - - - - - - 0.901 - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
22. EDEM2 ENSGALG00000003128 3338 0.901 - - - - - - - 0.901 - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
23. UBE4A ENSGALG00000031134 5851 0.901 - - - - - - - 0.901 - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
24. FOPNL ENSGALG00000006532 2922 0.901 - - - - - - - 0.901 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
25. RNF2 ENSGALG00000037219 2299 0.901 - - - - - - - 0.901 - - ring finger protein 2 [Source:HGNC Symbol;Acc:HGNC:10061]
26. ALDH4A1 ENSGALG00000042184 9432 0.9 - - - - - - - 0.900 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
27. CDCA2 ENSGALG00000045842 2236 0.9 - - - - - - - 0.900 - - cell division cycle associated 2, transcript variant X3
28. RASSF2 ENSGALG00000030432 4822 0.899 - - - - - - - 0.899 - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
29. NARG2 NARG2 2294 0.898 - - - - - - - 0.898 - -
30. MPP7 ENSGALG00000007408 2485 0.898 - - - - - - - 0.898 - - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
31. SLC27A4 ENSGALG00000004965 3278 0.898 - - - - - - - 0.898 - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
32. EMCN EMCN 2637 0.898 - - - - - - - 0.898 - -
33. ENSGALG00000027854 ENSGALG00000027854 5007 0.897 - - - - - - - 0.897 - -
34. CCDC93 ENSGALG00000012129 2405 0.896 - - - - - - - 0.896 - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
35. RBM27 ENSGALG00000007516 3909 0.896 - - - - - - - 0.896 - - RNA binding motif protein 27, transcript variant X3
36. TSPO2 ENSGALG00000003212 5141 0.895 - - - - - - - 0.895 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
37. TWISTNB ENSGALG00000010863 7563 0.894 - - - - - - - 0.894 - - TWIST neighbor [Source:NCBI gene;Acc:420603]
38. ODF2 ENSGALG00000004767 3972 0.894 - - - - - - - 0.894 - - outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
39. CCDC12 ENSGALG00000005487 8190 0.892 - - - - - - - 0.892 - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
40. PHKG1 ENSGALG00000002485 15214 0.891 - - - - - - - 0.891 - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
41. C1H12ORF23 C1H12ORF23 13234 0.887 - - - - - - - 0.887 - -
42. HSPA14 ENSGALG00000035201 7372 0.886 - - - - - - - 0.886 - - heat shock protein family A (Hsp70) member 14
43. THG1L ENSGALG00000003722 7497 0.885 - - - - - - - 0.885 - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
44. TRABD ENSGALG00000030705 6577 0.884 - - - - - - - 0.884 - - TraB domain containing [Source:NCBI gene;Acc:417746]
45. SEC22B ENSGALG00000039704 16080 0.875 - - - - - - - 0.875 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
46. KCTD2 ENSGALG00000007934 15085 0.873 - - - - - - - 0.873 - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
47. MTFR1 ENSGALG00000038385 9419 0.871 - - - - - - - 0.871 - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
48. WDR53 ENSGALG00000006395 4938 0.871 - - - - - - - 0.871 - - WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
49. CZH9ORF100 CZH9ORF100 4268 0.871 - - - - - - - 0.871 - -
50. C26H6ORF125 ENSGALG00000002881 15827 0.871 - - - - - - - 0.871 - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
51. PPIF ENSGALG00000004809 5586 0.87 - - - - - - - 0.870 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
52. HERC2 ENSGALG00000016739 9900 0.866 - - - - - - - 0.866 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
53. GTF2B ENSGALG00000006205 6950 0.865 - - - - - - - 0.865 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
54. SNF8 ENSGALG00000001309 7398 0.865 - - - - - - - 0.865 - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
55. HSF2BP ENSGALG00000016202 1696 0.858 - - - - - - - 0.858 - - heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:HGNC:5226]
56. SAR1A ENSGALG00000004431 28833 0.85 - - - - - - - 0.850 - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
57. SOD2 ENSGALG00000011661 13178 0.847 - - - - - - - 0.847 - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
58. SAMM50 ENSGALG00000014194 20437 0.844 - - - - - - - 0.844 - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
59. NIPSNAP3L ENSGALG00000027334 7514 0.841 - - - - - - - 0.841 - - nipsnap homolog 3-like
60. WDR43 ENSGALG00000032529 12235 0.834 - - - - - - - 0.834 - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
61. TMEM183A ENSGALG00000000223 6915 0.828 - - - - - - - 0.828 - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
62. ANXA11 ENSGALG00000043826 5189 0.826 - - - - - - - 0.826 - - annexin A11 [Source:NCBI gene;Acc:423637]
63. CAND1 4541 0.823 - - - - - - 0.823 - - - cullin associated and neddylation dissociated 1
64. TMEM62 ENSGALG00000009260 1170 0.823 - - - - - - 0.823 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
65. PTBP2 ENSGALG00000005552 3443 0.823 - - - - - - 0.823 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
66. TMC1 ENSGALG00000015145 1180 0.823 - - - - - - 0.823 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
67. TMEM120B ENSGALG00000004254 2819 0.823 - - - - - - 0.823 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
68. ENSGALG00000014190 ENSGALG00000014190 5735 0.823 - - - - - - 0.823 - - -
69. TMEM97 ENSGALG00000005702 2037 0.823 - - - - - - 0.823 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
70. ABCC10 2213 0.823 - - - - - - 0.823 - - - ATP binding cassette subfamily C member 10, transcript variant X10
71. BMP3 ENSGALG00000035052 3260 0.823 - - - - - - 0.823 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
72. CTU2 4818 0.822 - - - - - - 0.822 - - - cytosolic thiouridylase subunit 2, transcript variant X3
73. EGFLAM ENSGALG00000003726 4588 0.822 - - - - - - 0.822 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
74. HOXD8 ENSGALG00000037272 4338 0.821 - - - - - - 0.821 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
75. MRPL32 ENSGALG00000037258 6861 0.821 - - - - - - 0.821 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
76. M6PR ENSGALG00000031681 9442 0.82 - - - - - - 0.820 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
77. POLR1C ENSGALG00000010349 7059 0.82 - - - - - - 0.820 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
78. PHGDH ENSGALG00000002988 6912 0.818 - - - - - - 0.818 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
79. MOB3A ENSGALG00000031729 9690 0.818 - - - - - - 0.818 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
80. GTF2E1 ENSGALG00000042320 7712 0.818 - - - - - - - 0.818 - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
81. ENSGALG00000004773 ENSGALG00000004773 10418 0.816 - - - - - - 0.816 - - -
82. IMP4 ENSGALG00000029152 11669 0.815 - - - - - - 0.815 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
83. RAB2A ENSGALG00000015450 990 0.815 - - - - - - - 0.815 - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
84. MCM2 ENSGALG00000006037 13458 0.813 - - - - - - 0.813 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
85. CHNTHL1 CHNTHL1 4976 0.813 - - - - - - 0.813 - - -
86. POLR2D ENSGALG00000002057 14548 0.813 - - - - - - 0.813 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
87. MLYCD ENSGALG00000005494 1882 0.813 - - - - - - - 0.813 - - malonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]
88. ITGA1 ENSGALG00000014891 11378 0.81 - - - - - - 0.810 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
89. PRDX6 ENSGALG00000003053 17928 0.808 - - - - - - 0.808 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
90. PFDN4 ENSGALG00000007792 26514 0.807 - - - - - - 0.807 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
91. ECI1 ENSGALG00000031563 11326 0.806 - - - - - - - 0.806 - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
92. DDX21 ENSGALG00000004144 13105 0.805 - - - - - - 0.805 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
93. FBN3 ENSGALG00000037625 23313 0.805 - - - - - - 0.805 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
94. STX7 ENSGALG00000034374 4695 0.805 - - - - - - - 0.805 - - syntaxin 7 [Source:NCBI gene;Acc:426930]
95. EIF2B3 ENSGALG00000010140 7992 0.803 - - - - - - - 0.803 - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
96. FAM103A1 17380 0.803 - - - - - - 0.803 - - - family with sequence similarity 103 member A1, transcript variant X2
97. ATP5MC1 ENSGALG00000001330 37766 0.802 - - - - - - 0.802 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
98. DYNLL2 ENSGALG00000005522 17107 0.801 - - - - - - 0.801 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
99. SMC2 ENSGALG00000015691 34013 0.791 - - - - - - 0.791 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
100. DENR ENSGALG00000003795 30805 0.79 - - - - - - 0.790 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]

There are 37 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA