Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHD9

Gene Name Gene ID Reads Annotation
CHD9 ENSGALG00000039178 1168 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]











Genes with expression patterns similar to CHD9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHD9 ENSGALG00000039178 1168 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
2. TUBGCP3 ENSGALG00000016836 332 0.932 - - 0.932 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
3. ATP8B4 ENSGALG00000002326 456 0.922 - - 0.922 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
4. APTX ENSGALG00000001954 692 0.922 - - 0.922 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
5. IFT81 ENSGALG00000003854 2534 0.921 - - 0.921 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
6. SLC37A3 ENSGALG00000012849 836 0.918 - - 0.918 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
7. OSGIN2 ENSGALG00000042840 83 0.915 - - 0.915 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
8. ADK ENSGALG00000005057 199 0.913 - - 0.913 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
9. SOBP ENSGALG00000043047 147 0.911 - - 0.911 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
10. MLLT3 ENSGALG00000015078 502 0.911 - - 0.911 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
11. ABCE1 ENSGALG00000009961 958 0.911 - - 0.911 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
12. DBN1 ENSGALG00000033405 216 0.911 - - 0.911 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
13. ABCC3 ENSGALG00000007522 340 0.91 - - 0.910 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
14. MTHFSD ENSGALG00000033322 824 0.91 - - 0.910 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
15. GTF2H2 ENSGALG00000002399 2361 0.909 - - 0.909 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
16. KCTD3 ENSGALG00000009678 335 0.909 - - 0.909 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
17. PTDSS2 ENSGALG00000004300 682 0.909 - - 0.909 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
18. SLC3A1 ENSGALG00000009973 608 0.908 - - 0.908 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
19. U4 U4 69 0.908 - - 0.908 - - - - - - -
20. TCTN2 ENSGALG00000023683 3596 0.907 - - 0.907 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
21. PRUNE PRUNE 452 0.907 - - 0.907 - - - - - - -
22. FBXL5 ENSGALG00000014510 245 0.907 - - 0.907 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
23. CDC14B ENSGALG00000012627 110 0.907 - - 0.907 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
24. WHSC1 1712 0.907 - - 0.907 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
25. AKAP10 ENSGALG00000004679 103 0.907 - - 0.907 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
26. LRRC42 ENSGALG00000010743 384 0.907 - - 0.907 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
27. RQCD1 RQCD1 110 0.906 - - 0.906 - - - - - - -
28. CHAMP1 ENSGALG00000016813 508 0.906 - - 0.906 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
29. CEP104 ENSGALG00000000978 1130 0.906 - - 0.906 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
30. ITGB4 ENSGALG00000002389 44 0.905 - - 0.905 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
31. RTFDC1 ENSGALG00000007709 1727 0.905 - - 0.905 - - - - - - - replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]
32. UEVLD ENSGALG00000006342 164 0.905 - - 0.905 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
33. SZT2 ENSGALG00000028561 255 0.905 - - 0.905 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
34. TDRD6 48 0.905 - - 0.905 - - - - - - - tudor domain containing 6
35. ENSGALG00000002020 ENSGALG00000002020 183 0.905 - - 0.905 - - - - - - -
36. ENSGALG00000028964 ENSGALG00000028964 46 0.905 - - 0.905 - - - - - - -
37. RAD54L2 ENSGALG00000003243 187 0.905 - - 0.905 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
38. NXPE3 ENSGALG00000015344 111 0.905 - - 0.905 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
39. MRC2 ENSGALG00000000461 48 0.905 - - 0.905 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
40. MED12 ENSGALG00000036322 814 0.904 - - 0.904 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
41. F2R ENSGALG00000014983 106 0.904 - - 0.904 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
42. CLEC16A ENSGALG00000007167 66 0.904 - - 0.904 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
43. ENSGALG00000004703 ENSGALG00000004703 112 0.903 - - 0.903 - - - - - - -
44. SMARCAD1 ENSGALG00000037339 149 0.903 - - 0.903 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
45. ENSGALG00000020103 ENSGALG00000020103 64 0.903 - - 0.903 - - - - - - -
46. ATP10D ENSGALG00000014192 94 0.903 - - 0.903 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
47. ITM2B ENSGALG00000016996 1112 0.902 - - 0.902 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
48. CAMSAP1 ENSGALG00000001692 2617 0.902 - - 0.902 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
49. L3MBTL3 ENSGALG00000034030 113 0.902 - - 0.902 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
50. HYAL3 ENSGALG00000029000 712 0.901 - - 0.901 - - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
51. BBS5 ENSGALG00000009846 344 0.901 - - 0.901 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
52. RPS6KB1 ENSGALG00000005198 169 0.901 - - 0.901 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
53. SHMT1 ENSGALG00000005046 1430 0.901 - - 0.901 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
54. SLK ENSGALG00000008318 2220 0.9 - - 0.900 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
55. MIB1 ENSGALG00000014974 3583 0.9 - - 0.900 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
56. WAPAL WAPAL 625 0.9 - - 0.900 - - - - - - -
57. NACAD 679 0.9 - - 0.900 - - - - - - - NAC alpha domain containing, transcript variant X1
58. LMNB2 ENSGALG00000000470 4364 0.899 - - 0.899 - - - - - - - lamin B2 [Source:NCBI gene;Acc:396222]
59. IFT57 ENSGALG00000015356 5540 0.899 - - 0.899 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
60. SGCE ENSGALG00000009670 3070 0.899 - - 0.899 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
61. RECQL ENSGALG00000013174 1323 0.899 - - 0.899 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
62. C18orf8 C18orf8 1512 0.898 - - 0.898 - - - - - - -
63. GFER ENSGALG00000005579 1367 0.898 - - 0.898 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
64. LRRC71 ENSGALG00000027351 695 0.898 - - 0.898 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
65. TTPAL ENSGALG00000004244 2734 0.897 - - 0.897 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
66. UHRF2 ENSGALG00000015052 1268 0.896 - - 0.896 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
67. RRN3 ENSGALG00000041989 3934 0.894 - - 0.894 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
68. TRIM13 ENSGALG00000017011 92 0.894 - - 0.894 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
69. YBX3 ENSGALG00000031890 819 0.894 - - 0.894 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
70. MAPRE3 ENSGALG00000031726 191 0.893 - - 0.893 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
71. AASDHPPT ENSGALG00000027981 1017 0.893 - - 0.893 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
72. NDUFB1 ENSGALG00000028537 2059 0.892 - - 0.892 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
73. GON4L ENSGALG00000014643 1737 0.891 - - 0.891 - - - - - - - gon-4 like, transcript variant X2
74. FAM134C 860 0.89 - - 0.890 - - - - - - - family with sequence similarity 134 member C
75. NGF ENSGALG00000002556 122 0.889 - - 0.889 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
76. GDPD4 ENSGALG00000000690 824 0.889 - - 0.889 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
77. ENSGALG00000008689 ENSGALG00000008689 232 0.889 - - 0.889 - - - - - - -
78. BBX ENSGALG00000015353 1281 0.888 - - 0.888 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
79. PRPF38B ENSGALG00000001972 2009 0.888 - - 0.888 - - - - - - - pre-mRNA processing factor 38B
80. ATF7IP ENSGALG00000011814 1571 0.888 - - 0.888 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
81. TMEM242 ENSGALG00000013689 377 0.887 - - 0.887 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
82. PTPN2 ENSGALG00000013867 1128 0.887 - - 0.887 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
83. BAG5 ENSGALG00000031062 4498 0.886 - - 0.886 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
84. PCYT1B 190 0.886 - - 0.886 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
85. SMOC2 ENSGALG00000011205 340 0.885 - - 0.885 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
86. CDC5L ENSGALG00000016704 22893 0.885 - - 0.885 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
87. PCYOX1 ENSGALG00000013878 2200 0.883 - - 0.883 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
88. TWSG1 ENSGALG00000008400 1869 0.883 - - 0.883 - - - - - - - twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
89. DDX6 ENSGALG00000033064 2193 0.883 - - 0.883 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
90. PCDH17 ENSGALG00000016941 1006 0.883 - - 0.883 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
91. GSDMA ENSGALG00000013495 1650 0.882 - - 0.882 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
92. AKT3 ENSGALG00000034081 866 0.882 - - 0.882 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
93. AMBRA1 ENSGALG00000008358 2865 0.882 - - 0.882 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
94. STRBP ENSGALG00000029927 3516 0.881 - - 0.881 - - - - - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
95. CHGA ENSGALG00000010820 1028 0.881 - - 0.881 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
96. RFK ENSGALG00000033558 1364 0.881 - - 0.881 - - - - - - - riboflavin kinase, transcript variant X3
97. ARRDC4 ENSGALG00000007012 1039 0.881 - - 0.881 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
98. FBXO45 ENSGALG00000037281 3936 0.879 - - 0.879 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
99. DNAJC24 ENSGALG00000012130 1882 0.879 - - 0.879 - - - - - - - DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
100. MBSP MBSP 5634 0.879 - - 0.879 - - - - - - -

There are 363 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA