Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHD6

Gene Name Gene ID Reads Annotation
CHD6 477 chromodomain helicase DNA binding protein 6, transcript variant X10











Genes with expression patterns similar to CHD6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHD6 477 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 6, transcript variant X10
2. CYP3A4 ENSGALG00000004436 75 1.679 - - - - - 0.756 - 0.923 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
3. TMEM248 ENSGALG00000033954 248 1.578 - - - - - - - 0.869 - 0.709 transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
4. ENSGALG00000027352 ENSGALG00000027352 69 0.951 - - - - - - - 0.951 - -
5. RAB19 ENSGALG00000012850 155 0.944 - - - - - - - 0.944 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
6. TMEM45B ENSGALG00000001203 48 0.944 - - - - - - - 0.944 - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
7. PRKAA1 ENSGALG00000014832 547 0.938 - - - - - - - 0.938 - - protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
8. P4HB ENSGALG00000038290 286 0.934 - - - - - - - 0.934 - - prolyl 4-hydroxylase subunit beta [Source:NCBI gene;Acc:374091]
9. PTDSS2 ENSGALG00000004300 682 0.934 - - - - - - - 0.934 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
10. PLXNC1 ENSGALG00000011309 69 0.932 - - - - - - - 0.932 - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
11. WNT16 ENSGALG00000028069 157 0.931 - - - - - - - 0.931 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
12. MIF4GD ENSGALG00000026715 41 0.93 - - - - - - - 0.930 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
13. ADAM17 ENSGALG00000016427 49 0.929 - - - - - - - 0.929 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
14. METTL24 ENSGALG00000041120 60 0.929 - - - - - - - 0.929 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
15. AVP ENSGALG00000014117 19 0.929 - - - - - - - 0.929 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
16. ENSGALG00000026913 ENSGALG00000026913 12 0.929 - - - - - - - 0.929 - -
17. FHL1 ENSGALG00000006190 22 0.928 - - - - - - - 0.928 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
18. ABCA4 ENSGALG00000005752 15 0.927 - - - - - - - 0.927 - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
19. TGM4 ENSGALG00000033171 19 0.926 - - - - - - - 0.926 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
20. ARSD ENSGALG00000016648 33 0.92 - - - - - - - 0.920 - - arylsulfatase D, transcript variant X1
21. OSBP ENSGALG00000030548 439 0.92 - - - - - - - 0.920 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
22. SOD3 ENSGALG00000018557 16 0.919 - - - - - - - 0.919 - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
23. RBBP8NL ENSGALG00000045938 89 0.918 - - - - - - - 0.918 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
24. FBXL18 ENSGALG00000004611 97 0.915 - - - - - - - 0.915 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
25. BAAT ENSGALG00000040619 579 0.915 - - - - - - - 0.915 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
26. UGT8L ENSGALG00000005599 93 0.914 - - - - - - - 0.914 - - UDP glycosyltransferase 8-like
27. PAPSS2 ENSGALG00000003689 278 0.914 - - - - - - - 0.914 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
28. SELP 28 0.912 - - - - - - - 0.912 - - selectin P, transcript variant X9
29. ENSGALG00000001886 ENSGALG00000001886 1024 0.911 - - - - - - - 0.911 - -
30. PC7 PC7 1105 0.911 - - - - - - - 0.911 - -
31. GRHPR ENSGALG00000005423 1567 0.911 - - - - - - - 0.911 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
32. ENSGALG00000016213 ENSGALG00000016213 33 0.91 - - - - - - - 0.910 - -
33. C1QA ENSGALG00000021569 343 0.908 - - - - - - - 0.908 - - complement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]
34. GJB1 ENSGALG00000005541 261 0.907 - - - - - - - 0.907 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
35. DDB1 ENSGALG00000042333 275 0.905 - - - - - - - 0.905 - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
36. MAT2A ENSGALG00000015366 17 0.905 - - - - - - - 0.905 - - methionine adenosyltransferase 2A, transcript variant X1
37. KLHL32 68 0.902 - - - - - - - 0.902 - - kelch like family member 32, transcript variant X3
38. NTNG2 ENSGALG00000003677 73 0.899 - - - - - - - 0.899 - - netrin G2 [Source:HGNC Symbol;Acc:HGNC:14288]
39. ORC6 ENSGALG00000004342 454 0.896 - - - - - - - 0.896 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
40. GLB1L2 ENSGALG00000001604 4057 0.895 - - - - - - - 0.895 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
41. GLOD5 ENSGALG00000025991 17 0.894 - - - - - - - 0.894 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
42. POLR1A ENSGALG00000038160 236 0.894 - - - - - - - 0.894 - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
43. IFT88 1241 0.891 - - - - - - - 0.891 - - intraflagellar transport 88, transcript variant X3
44. LOX ENSGALG00000028063 1488 0.888 - - - - - - - 0.888 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
45. C5 ENSGALG00000001565 142 0.887 - - - - - - - 0.887 - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
46. CCDC102A ENSGALG00000029999 324 0.885 - - - - - - - 0.885 - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
47. TRUB1 ENSGALG00000009091 1005 0.885 - - - - - - - 0.885 - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
48. NUDT13 ENSGALG00000004319 341 0.884 - - - - - - - 0.884 - - nudix hydrolase 13 [Source:HGNC Symbol;Acc:HGNC:18827]
49. ENSGALG00000024035 ENSGALG00000024035 544 0.881 - - - - - - - 0.881 - -
50. CHRNA6 ENSGALG00000015382 31 0.874 - - - - - - - 0.874 - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
51. SYNE1 ENSGALG00000013505 2324 0.874 - - - - - - - 0.874 - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
52. EREG ENSGALG00000010864 46 0.872 - - - - - - - 0.872 - - epiregulin [Source:NCBI gene;Acc:408036]
53. TNK2 ENSGALG00000027983 144 0.871 - - - - - - - 0.871 - - tyrosine kinase non receptor 2, transcript variant X7
54. ENSGALG00000014825 ENSGALG00000014825 491 0.869 - - - - - - - 0.869 - -
55. LGR5 ENSGALG00000010163 2931 0.865 - - - - - - - 0.865 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
56. OGN ENSGALG00000026736 223 0.864 - - - - - - - 0.864 - - osteoglycin [Source:NCBI gene;Acc:374039]
57. MMD2 ENSGALG00000004530 167 0.864 - - - - - - - 0.864 - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
58. NOTCH2 ENSGALG00000002922 3272 0.863 - - - - - - - 0.863 - - notch 2 [Source:NCBI gene;Acc:374031]
59. VDAC1 ENSGALG00000006503 864 0.858 - - - - - - - 0.858 - - voltage dependent anion channel 1 [Source:NCBI gene;Acc:416320]
60. SERPINF2 ENSGALG00000002987 236 0.858 - - - - - - - 0.858 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
61. ENSGALG00000021106 ENSGALG00000021106 35 0.857 - - - - - - - 0.857 - -
62. CYP20A1 ENSGALG00000008730 930 0.857 - - - - - - - 0.857 - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
63. LANCL1 ENSGALG00000002921 571 0.854 - - - - - - - 0.854 - - LanC like 1 [Source:NCBI gene;Acc:424006]
64. KSR1 ENSGALG00000005685 78 0.853 - - - - - - - 0.853 - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
65. SOSTDC1 ENSGALG00000036836 1081 0.851 - - - - - - - 0.851 - - sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
66. ZNF335 ENSGALG00000041370 4740 0.849 - - - - - - - 0.849 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
67. KLF8 ENSGALG00000007570 1651 0.849 - - - - - - - 0.849 - - Kruppel-like factor 8, transcript variant X6
68. DAG1 ENSGALG00000037784 1012 0.849 - - - - - - - 0.849 - - dystroglycan 1 [Source:NCBI gene;Acc:100049058]
69. ES1ML2 ENSGALG00000007526 179 0.839 - - - - - - - 0.839 - - ES1 protein homolog, mitochondrial-like 2
70. TERT ENSGALG00000013183 251 0.835 - - - - - - - 0.835 - - telomerase reverse transcriptase [Source:NCBI gene;Acc:420972]
71. C12ORF32 C12ORF32 768 0.835 - - - - - - - 0.835 - -
72. AK2 ENSGALG00000003597 1415 0.834 - - - - - - - 0.834 - - adenylate kinase 2 [Source:HGNC Symbol;Acc:HGNC:362]
73. STK24 ENSGALG00000016885 442 0.834 - - - - - - - 0.834 - - serine/threonine kinase 24 [Source:NCBI gene;Acc:418780]
74. C1orf159 ENSGALG00000027363 1672 0.833 - - - - - - - 0.833 - - chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]
75. GOSR1 ENSGALG00000004326 1556 0.833 - - - - - - - 0.833 - - golgi SNAP receptor complex member 1 [Source:NCBI gene;Acc:417591]
76. COG2 ENSGALG00000011114 522 0.833 - - - - - - - 0.833 - - component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:HGNC:6546]
77. C4orf47 ENSGALG00000013287 44 0.832 - - - - - - - 0.832 - - chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
78. PITHD1 ENSGALG00000003986 11470 0.832 - - - - - - - 0.832 - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
79. SMARCD3 ENSGALG00000043137 401 0.829 - - - - - - - 0.829 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
80. FBXO32 ENSGALG00000041202 1066 0.829 - - - - - - - 0.829 - - F-box protein 32 [Source:NCBI gene;Acc:420343]
81. CSMD2 ENSGALG00000030229 716 0.828 - - - - - - - 0.828 - - CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
82. MXRA8 ENSGALG00000001561 181 0.827 - - - - - - - 0.827 - - matrix remodeling associated 8 [Source:NCBI gene;Acc:395347]
83. UGGT1 ENSGALG00000002141 563 0.826 - - - - - - - 0.826 - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15663]
84. IGFBP4 ENSGALG00000040672 608 0.825 - - - - - - - 0.825 - - insulin like growth factor binding protein 4 [Source:NCBI gene;Acc:374271]
85. RASSF8 ENSGALG00000014041 850 0.823 - - - - - - - 0.823 - - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
86. DIO1 ENSGALG00000010736 87 0.82 - - - - - - - 0.820 - - iodothyronine deiodinase 1 [Source:NCBI gene;Acc:395940]
87. CIDEA ENSGALG00000034500 405 0.819 - - - - - - - 0.819 - - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
88. FBP1 ENSGALG00000012613 258 0.817 - - - - - - - 0.817 - - fructose-bisphosphatase 1 [Source:NCBI gene;Acc:395218]
89. SLC7A5 ENSGALG00000005845 261 0.816 - - - - - - - 0.816 - - solute carrier family 7 member 5 [Source:NCBI gene;Acc:415832]
90. SLC22A23 ENSGALG00000012816 946 0.814 - - - - - - - 0.814 - - solute carrier family 22 member 23 [Source:HGNC Symbol;Acc:HGNC:21106]
91. SYT17 ENSGALG00000030534 385 0.814 - - - - - - - 0.814 - - synaptotagmin 17 [Source:HGNC Symbol;Acc:HGNC:24119]
92. UBOX5 ENSGALG00000035134 1705 0.813 - - - - - - - 0.813 - - U-box domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17777]
93. NR0B1 ENSGALG00000016287 481 0.812 - - - - - - - 0.812 - - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
94. COG1 ENSGALG00000029893 4309 0.811 - - - - - - - 0.811 - - component of oligomeric golgi complex 1 [Source:NCBI gene;Acc:417449]
95. G6PC2 ENSGALG00000010899 260 0.811 - - - - - - - 0.811 - - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
96. SLC35B4 ENSGALG00000038187 320 0.809 - - - - - - - 0.809 - - solute carrier family 35 member B4 [Source:HGNC Symbol;Acc:HGNC:20584]
97. PXMP4 ENSGALG00000003042 1035 0.806 - - - - - - - 0.806 - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
98. VPS29L ENSGALG00000005951 31 0.804 - - - - - - - 0.804 - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
99. FCRL2 FCRL2 488 0.804 - - - - - - - 0.804 - -
100. KIAA1671 ENSGALG00000005512 2540 0.803 - - - - - - - 0.803 - - KIAA1671 [Source:NCBI gene;Acc:768701]

There are 96 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA