Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHD2

Gene Name Gene ID Reads Annotation
CHD2 ENSGALG00000006949 1076 chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]











Genes with expression patterns similar to CHD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHD2 ENSGALG00000006949 1076 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
2. SERINC2 ENSGALG00000021685 1581 1.755 - - - - - - - - 0.880 0.875 serine incorporator 2 [Source:NCBI gene;Acc:419558]
3. HERPUD1 ENSGALG00000001220 18 1.709 - - 0.798 - - - - - - 0.911 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
4. TLN1 ENSGALG00000002548 489 1.703 - - - - - - - - 0.877 0.826 talin 1 [Source:NCBI gene;Acc:395194]
5. NTL ENSGALG00000005156 278 1.657 - - - - - - - - 0.859 0.798 neurotrypsin-like, transcript variant X7
6. RIT1 ENSGALG00000014647 7174 1.651 - - - - - - - - 0.836 0.815 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
7. LONRF2 ENSGALG00000016768 193 1.639 - - 0.723 - - - - - - 0.916 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
8. MSANTD4 ENSGALG00000017177 3306 1.633 - - - - - - - - 0.866 0.767 Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
9. SH3TC1 ENSGALG00000015568 484 1.623 - - - - - - - - 0.803 0.820 SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
10. DMB2 ENSGALG00000038393 1257 1.623 - - - - - - - - 0.791 0.832 major histocompatibility complex, class II, DM beta 2 [Source:NCBI gene;Acc:417051]
11. FAM69A ENSGALG00000005918 157 1.596 - - 0.771 - - - - - - 0.825 family with sequence similarity 69 member A, transcript variant X4
12. ACSL3 ENSGALG00000005206 1763 1.592 - - - - - - - - 0.741 0.851 acyl-CoA synthetase long chain family member 3 [Source:HGNC Symbol;Acc:HGNC:3570]
13. CEP68 ENSGALG00000008787 1591 1.507 - - - - - - - 0.742 - 0.765 centrosomal protein 68 [Source:HGNC Symbol;Acc:HGNC:29076]
14. C1H13ORF27 C1H13ORF27 635 1.49 - - - - - - - - 0.745 0.745
15. AHI1 ENSGALG00000013951 719 1.461 - - - - - - - - 0.712 0.749 Abelson helper integration site 1 [Source:HGNC Symbol;Acc:HGNC:21575]
16. LRRN4 ENSGALG00000008815 481 1.46 - - 0.758 - - - - - 0.702 - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
17. CARS2 ENSGALG00000016847 3814 0.919 - - - - - - - - 0.919 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
18. MRVI1 ENSGALG00000005632 450 0.917 - - - - - - - - - 0.917 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
19. FANCA ENSGALG00000000516 250 0.916 - - - - - - - - - 0.916 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
20. TPCN2 ENSGALG00000007550 10 0.915 - - - - - - - - - 0.915 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
21. PAG1 ENSGALG00000034188 9 0.915 - - - - - - - - - 0.915 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
22. DTX3L ENSGALG00000012075 399 0.915 - - - - - - - - 0.915 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
23. LANCL3 ENSGALG00000016265 9 0.915 - - - - - - - - - 0.915 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
24. NEURL NEURL 221 0.914 - - - - - - - - - 0.914
25. RUFY2 1442 0.912 - - - - - - - - 0.912 - RUN and FYVE domain containing 2, transcript variant X1
26. S1PR1 ENSGALG00000005208 12 0.911 - - - - - - - - - 0.911 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
27. XYLT1 ENSGALG00000006757 169 0.91 - - - - - - - - - 0.910 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
28. LPGAT1 ENSGALG00000009848 33 0.91 - - - - - - - - - 0.910 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
29. SIAT7E SIAT7E 13 0.91 - - - - - - - - - 0.910
30. KIAA1217 ENSGALG00000007766 144 0.91 - - - - - - - - 0.910 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
31. RBBP8 ENSGALG00000014982 3255 0.908 - - - - - - - - 0.908 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
32. LHCGR ENSGALG00000009095 174 0.906 - - - - - - - - 0.906 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
33. ABCC8 ENSGALG00000006172 41 0.906 - - - - - - - - 0.906 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
34. POLR3B ENSGALG00000012655 704 0.906 - - - - - - - - - 0.906 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
35. KLHL15 ENSGALG00000016345 1638 0.906 - - - - - - - - 0.906 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
36. ENSGALG00000019793 ENSGALG00000019793 198 0.906 - - - - - - - - 0.906 -
37. FAM120B ENSGALG00000011180 101 0.905 - - - - - - - - 0.905 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
38. EHD4 ENSGALG00000008950 22 0.905 - - - - - - - - - 0.905 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
39. FER1L6 ENSGALG00000033783 196 0.905 - - - - - - - - - 0.905 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
40. PCLO 249 0.904 - - - - - - - - 0.904 - piccolo presynaptic cytomatrix protein
41. DCP1B 1306 0.904 - - - - - - - - 0.904 - decapping mRNA 1B
42. GAA ENSGALG00000038853 158 0.904 - - - - - - - - - 0.904 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
43. SMAP2 ENSGALG00000029244 498 0.904 - - - - - - - - 0.904 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
44. AKAP10 ENSGALG00000004679 103 0.904 - - - - - - - - - 0.904 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
45. VWF ENSGALG00000017272 1012 0.904 - - - - - - - - 0.904 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
46. ALMS1 ENSGALG00000044620 570 0.903 - - - - - - - - 0.903 - ALMS1, centrosome and basal body associated protein, transcript variant X1
47. SCL SCL 69 0.903 - - - - - - - - - 0.903
48. ZNF839 ENSGALG00000011368 148 0.902 - - - - - - - - - 0.902 zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]
49. FLRT3 ENSGALG00000008716 593 0.902 - - - - - - - - 0.902 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
50. XPOT ENSGALG00000009835 2953 0.901 - - - - - - - - 0.901 - exportin for tRNA [Source:NCBI gene;Acc:417824]
51. PLEKHA1 ENSGALG00000034548 34 0.901 - - - - - - - - - 0.901 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
52. WDR63 ENSGALG00000008696 15 0.9 - - - - - - - - - 0.900 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
53. ENSGALG00000009344 ENSGALG00000009344 330 0.9 - - - - - - - - - 0.900
54. CSGALNACT2 ENSGALG00000002543 138 0.895 - - - - - - - - - 0.895 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:24292]
55. PARP3 ENSGALG00000004517 331 0.894 - - - - - - - - 0.894 - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
56. PCYT2 ENSGALG00000007251 2277 0.893 - - - - - - - - 0.893 - phosphate cytidylyltransferase 2, ethanolamine [Source:NCBI gene;Acc:422093]
57. FAM161A ENSGALG00000008810 36 0.892 - - - - - - - - - 0.892 FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
58. FKBP1B ENSGALG00000016500 117 0.892 - - 0.892 - - - - - - - FK506 binding protein 1B [Source:NCBI gene;Acc:395254]
59. TMEM269 ENSGALG00000025800 143 0.891 - - - - - - - - 0.891 - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
60. PRTFDC1 ENSGALG00000007694 111 0.89 - - - - - - - - - 0.890 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
61. ECHDC1 ENSGALG00000014828 958 0.89 - - - - - - - - - 0.890 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
62. RFX3 ENSGALG00000010179 305 0.889 - - - - - - - - - 0.889 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
63. FAM160A2 ENSGALG00000003416 23 0.888 - - - - - - - - - 0.888 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
64. PRDM15 ENSGALG00000019178 2729 0.888 - - - - - - - - 0.888 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
65. CEP112 ENSGALG00000034989 123 0.888 - - - - - - - - 0.888 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
66. FDFT1 ENSGALG00000016665 3053 0.887 - - - - - - - - 0.887 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
67. MCMBP ENSGALG00000009455 90 0.887 - - - - - - - - - 0.887 minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
68. PIGV ENSGALG00000039883 32 0.887 - - - - - - - - - 0.887 phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
69. AACS ENSGALG00000002899 960 0.887 - - - - - - - - 0.887 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
70. SCAF4 ENSGALG00000033965 2027 0.886 - - - - - - - - - 0.886 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
71. PDXDC1 ENSGALG00000034829 406 0.885 - - - - - - - - 0.885 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
72. ENSGALG00000021439 ENSGALG00000021439 628 0.885 - - - - - - - - - 0.885
73. CSMD2 ENSGALG00000030229 716 0.885 - - - - - - - - - 0.885 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
74. CSMD3 ENSGALG00000031578 23 0.885 - - - - - - - - - 0.885 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
75. SP2 ENSGALG00000000233 43 0.884 - - - - - - - - - 0.884 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
76. HAGH ENSGALG00000005398 168 0.883 - - - - - - - - 0.883 - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
77. RAD54L2 ENSGALG00000003243 187 0.883 - - - - - - - - - 0.883 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
78. ZDHHC7 ENSGALG00000042522 1774 0.882 - - - - - - - - 0.882 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
79. PEX1 ENSGALG00000009410 902 0.882 - - - - - - - - - 0.882 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]
80. LRP12 ENSGALG00000033630 2534 0.881 - - - - - - - - 0.881 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
81. PGS1 ENSGALG00000007181 3187 0.881 - - - - - - - - 0.881 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
82. JAG1 ENSGALG00000009020 25 0.88 - - - - - - - - - 0.880 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
83. IGF1R ENSGALG00000040651 772 0.88 - - - - - - - - 0.880 - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
84. GRIN3B ENSGALG00000026241 177 0.88 - - - - - - - - - 0.880 glutamate ionotropic receptor NMDA type subunit 3B [Source:HGNC Symbol;Acc:HGNC:16768]
85. CCP110 ENSGALG00000006925 59 0.879 - - - - - - - - - 0.879 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
86. MAP3K5 ENSGALG00000013892 565 0.879 - - - - - - - - 0.879 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
87. TOM1L2 ENSGALG00000004902 89 0.878 - - - - - - - - 0.878 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
88. SLC25A30 ENSGALG00000016979 2625 0.877 - - - - - - - - - 0.877 solute carrier family 25 member 30 [Source:HGNC Symbol;Acc:HGNC:27371]
89. CEP250 ENSGALG00000026151 163 0.877 - - - - - - - - 0.877 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
90. MTSS1 ENSGALG00000041969 1312 0.877 - - - - - - - - 0.877 - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
91. ENSGALG00000026919 ENSGALG00000026919 301 0.876 - - - - - - - - 0.876 -
92. OSTM1 ENSGALG00000015306 192 0.875 - - - - - - - - - 0.875 osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
93. ATP6AP2 ENSGALG00000016241 257 0.875 - - - - - - - - - 0.875 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
94. CAMKK1 ENSGALG00000001617 64 0.875 - - - - - - - - 0.875 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
95. MDN1 ENSGALG00000015733 2352 0.874 - - - - - - - - 0.874 - midasin AAA ATPase 1, transcript variant X1
96. SPATA5L1 ENSGALG00000005682 240 0.873 - - - - - - - - 0.873 - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
97. FKBP8 ENSGALG00000003357 942 0.872 - - - - - - - - - 0.872 FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
98. IQCA1 ENSGALG00000003980 87 0.872 - - - - - - - - 0.872 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
99. NRXN1 ENSGALG00000009107 277 0.872 - - - - - - - - 0.872 - neurexin 1 [Source:NCBI gene;Acc:395398]
100. CUX2 ENSGALG00000004598 231 0.872 - - - - - - - - 0.872 - cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]

There are 515 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA