Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CHCHD3

Gene Name Gene ID Reads Annotation
CHCHD3 CHCHD3 1425










Genes with expression patterns similar to CHCHD3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CHCHD3 CHCHD3 1425 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 2.529 - 0.993 - - - 0.744 0.792 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
3. CU633479.5 ENSDARG00000114818 1815 2.506 - - - 0.759 - 0.855 0.892 - -
4. tnnt3a ENSDARG00000030270 112506 2.251 - 0.814 0.708 - - - 0.729 - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
5. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 2.245 - 0.782 - - - 0.700 0.763 - - ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
6. atp1b3b ENSDARG00000042837 5163 1.905 - 0.997 - - - - 0.908 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
7. gulp1a ENSDARG00000001733 1206 1.876 - 1.000 - 0.876 - - - - - GULP, engulfment adaptor PTB domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-21]
8. cnbpb ENSDARG00000070922 14606 1.871 - 0.956 - - - - 0.915 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
9. zgc:92518 ENSDARG00000016343 3837 1.852 - 0.951 - - - - 0.901 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
10. smtnl1 ENSDARG00000041257 7410 1.852 - 0.963 - - - - 0.889 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
11. STMN3 ENSDARG00000038465 1009 1.852 - 1.000 - 0.852 - - - - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
12. nexn ENSDARG00000057317 10972 1.849 - 0.968 - - - - 0.881 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
13. ube2d3 ENSDARG00000038473 4096 1.826 - 0.983 - - - - 0.843 - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
14. cox7c ENSDARG00000104537 12169 1.817 - 0.984 - - - - 0.833 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
15. dub ENSDARG00000059774 1026 1.815 - 1.000 - - - - 0.815 - - duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]
16. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.81 - 0.934 - - - - 0.876 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
17. lims2 ENSDARG00000014976 1248 1.792 - 0.999 - - - - 0.793 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
18. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.775 - 0.876 - - - - 0.899 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
19. riok3 ENSDARG00000042751 3163 1.766 - 0.998 - - - 0.768 - - - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
20. surf6 ENSDARG00000035427 1695 1.758 - 0.999 - - - 0.759 - - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
21. hccsa hccsa 869 1.745 - 1.000 - - - - 0.745 - -
22. SERP1 ENSDARG00000076223 2528 1.726 - 0.999 - - - - 0.727 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
23. hibadhb ENSDARG00000007959 4858 1.708 - 0.884 - - - - 0.824 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
24. akap6 ENSDARG00000077295 1382 1.672 - - - 0.836 - - 0.836 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
25. eif2s2 ENSDARG00000053047 15904 1.659 - 0.793 - - - - 0.866 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
26. atp5o 10343 1.659 - - - - - 0.835 0.824 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
27. ntmt1 ENSDARG00000022399 5779 1.651 - - - - - 0.751 0.900 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
28. MUSTN1 MUSTN1 1882 1.65 - - - - - 0.781 0.869 - -
29. si:ch211-85n16.3 ENSDARG00000096346 1095 1.648 - - - 0.846 - - 0.802 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
30. BX294434.1 ENSDARG00000061272 6493 1.648 - - 0.735 - - - 0.913 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
31. fitm1 ENSDARG00000056464 1759 1.644 - - - 0.726 - - 0.918 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
32. ndufb3 ENSDARG00000075709 6609 1.633 - - - - - 0.736 0.897 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
33. sh3bgr ENSDARG00000021633 3498 1.625 - - - - - 0.713 0.912 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
34. CR627484.1 CR627484.1 452 1.625 - - - 0.914 - - 0.711 - -
35. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 1.622 - - - - - 0.771 0.851 - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
36. aimp1 ENSDARG00000060036 5343 1.622 - - - - - 0.736 0.886 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
37. zgc:195001 ENSDARG00000070484 3281 1.613 - - - 0.777 - - 0.836 - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
38. BX530018.3 ENSDARG00000107022 614 1.608 - - - - - 0.771 0.837 - -
39. six1b ENSDARG00000026473 1908 1.598 - - - - - 0.709 0.889 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
40. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.584 - - - - - 0.739 0.845 - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
41. msrb3 ENSDARG00000045658 988 1.584 - - 0.721 - - - 0.863 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
42. bag2 ENSDARG00000035005 1402 1.58 - - - - - 0.712 0.868 - - BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
43. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.578 - - - - - 0.701 0.877 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
44. slc43a1b ENSDARG00000037748 1406 1.559 - - - - - 0.723 0.836 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
45. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.546 - - - - - 0.717 0.829 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
46. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 1.533 - - - 0.785 - - 0.748 - - small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
47. cycsb ENSDARG00000044562 40227 1.524 - - - - - 0.730 0.794 - - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
48. cct6a ENSDARG00000021252 33641 1.519 - 0.811 - - - - 0.708 - - chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
49. meis4.1a meis4.1a 1165 1.514 - - - - - 0.744 0.770 - -
50. pgp ENSDARG00000029695, ENSDARG00000114512 829 1.512 - - - - - 0.737 0.775 - - phosphoglycolate phosphatase [Source:ZFIN;Acc:ZDB-GENE-030131-6240]
51. atp5j 4272 1.51 - - - - - 0.701 0.809 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
52. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 1.503 - - - - - 0.727 0.776 - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
53. alg3 ENSDARG00000053155 1843 1.502 0.714 - - - - - 0.788 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
54. hs2st1a ENSDARG00000099478 864 1.494 - - - 0.785 - - 0.709 - - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
55. slc25a5 ENSDARG00000092553 626 1.493 - - - 0.787 - 0.706 - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
56. asphd2 ENSDARG00000059629 1005 1.489 - - - 0.731 - - 0.758 - - aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
57. mrps34 ENSDARG00000057910 2007 1.465 - - - - - 0.727 0.738 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
58. c2cd2l ENSDARG00000061066 136 1.46 - - - - - 0.714 0.746 - - c2cd2-like [Source:ZFIN;Acc:ZDB-GENE-041019-1]
59. glrx5 ENSDARG00000043665 2687 1.458 - - - - - 0.758 0.700 - - glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
60. rmi1 ENSDARG00000041376 674 1 - 1.000 - - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
61. si:dkey-197c15.6 ENSDARG00000079401 745 1 - 1.000 - - - - - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
62. decr1 ENSDARG00000003869 1344 1 - 1.000 - - - - - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
63. dact1 ENSDARG00000101635 1303 1 - 1.000 - - - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
64. nit2 ENSDARG00000017590 1393 1 - 1.000 - - - - - - - nitrilase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-65]
65. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 1 - 1.000 - - - - - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
66. rasef ENSDARG00000076250 1359 1 - 1.000 - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
67. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1 - 1.000 - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
68. TMEM200B TMEM200B 554 1 - 1.000 - - - - - - -
69. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1 - 1.000 - - - - - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
70. stag1b ENSDARG00000062137 1814 1 - 1.000 - - - - - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
71. ercc6l ENSDARG00000002479 1535 1 - 1.000 - - - - - - - excision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
72. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 1 - 1.000 - - - - - - - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
73. NUAK1_1 NUAK1_1 1782 1 - 1.000 - - - - - - -
74. cpe ENSDARG00000055874, ENSDARG00000116033 2981 1 - 1.000 - - - - - - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
75. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1 - 1.000 - - - - - - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
76. MED17 ENSDARG00000006345 779 1 - 1.000 - - - - - - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
77. nanos1 ENSDARG00000109337 2494 1 - 1.000 - - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
78. TMPPE ENSDARG00000036059, ENSDARG00000114955 567 1 - 1.000 - - - - - - - transmembrane protein with metallophosphoesterase domain [Source:ZFIN;Acc:ZDB-GENE-061013-104]
79. FAM3D ENSDARG00000091625 1392 0.999 - 0.999 - - - - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
80. dyrk1b ENSDARG00000070187 2777 0.999 - 0.999 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
81. MRPL42 ENSDARG00000079391 1403 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
82. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 0.999 - 0.999 - - - - - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
83. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 0.999 - 0.999 - - - - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
84. rad21a_1 ENSDARG00000006092 4482 0.999 - 0.999 - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
85. mbnl2 ENSDARG00000018460 3328 0.999 - 0.999 - - - - - - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
86. RABGAP1 ENSDARG00000098967 933 0.999 - 0.999 - - - - - - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
87. me3 ENSDARG00000002305 3305 0.999 - 0.999 - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
88. acvr2ab ENSDARG00000104700 1569 0.999 - 0.999 - - - - - - - activin A receptor type 2Ab [Source:ZFIN;Acc:ZDB-GENE-120215-23]
89. nup133 ENSDARG00000010078 2373 0.999 - 0.999 - - - - - - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
90. creg1 ENSDARG00000105154 843 0.999 - 0.999 - - - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
91. murca murca 6614 0.999 - 0.999 - - - - - - -
92. rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 0.999 - 0.999 - - - - - - - retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]
93. eif4a3 ENSDARG00000102978 16162 0.998 - 0.998 - - - - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
94. med10 ENSDARG00000070623 5134 0.998 - 0.998 - - - - - - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
95. dpp4 ENSDARG00000079420 1286 0.998 - 0.998 - - - - - - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
96. PHLPP1 ENSDARG00000078694 2466 0.998 - 0.998 - - - - - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
97. ndufa7 ENSDARG00000036684 6051 0.998 - 0.998 - - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
98. fbl ENSDARG00000053912 5891 0.997 - 0.997 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
99. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 0.997 - 0.997 - - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
100. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 0.997 - 0.997 - - - - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]

There are 1147 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA