Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHCHD3

Gene Name Gene ID Reads Annotation
CHCHD3 ENSGALG00000006489 18592 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]











Genes with expression patterns similar to CHCHD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHCHD3 ENSGALG00000006489 18592 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
2. CANX ENSGALG00000032148 11297 1.779 - - - 0.865 - - 0.914 - - - calnexin [Source:NCBI gene;Acc:416288]
3. CACYBP ENSGALG00000004554 7320 1.761 - - - 0.884 - - 0.877 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
4. DBNDD2 ENSGALG00000003921 8301 1.731 - - - 0.850 - - 0.881 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
5. USB1 ENSGALG00000035604 4003 1.72 - - - 0.841 - - 0.879 - - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
6. CMSS1 ENSGALG00000015267 2954 1.667 - - - 0.866 - - 0.801 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
7. TMEM251 ENSGALG00000017387 3423 1.658 - - - 0.813 - - 0.845 - - - transmembrane protein 251 [Source:NCBI gene;Acc:423422]
8. RBM19 ENSGALG00000008289 10702 1.655 - - - 0.724 - - 0.931 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
9. ZCCHC2 ENSGALG00000012889 3163 1.652 - - - 0.837 - - 0.815 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
10. ATG4B ENSGALG00000006298 2288 1.648 - - - 0.895 - - 0.753 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
11. PSMA2 ENSGALG00000039387 23620 1.617 - - - 0.775 - - 0.842 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
12. IDI1 ENSGALG00000006723 7761 1.615 - - - 0.856 - - 0.759 - - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
13. NUP205 ENSGALG00000011662 4157 1.611 - - - 0.855 - - 0.756 - - - nucleoporin 205
14. MOSPD1 ENSGALG00000006132 8503 1.609 - - - 0.896 - - 0.713 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
15. TLCD1 ENSGALG00000003973 17569 1.607 - - - 0.736 - - 0.871 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
16. IPO9 ENSGALG00000000397 9263 1.606 - - - 0.845 - - 0.761 - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
17. LYAR ENSGALG00000015000 10756 1.604 - - - 0.746 - - 0.858 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
18. TAF8 ENSGALG00000003498 2071 1.598 - - - 0.777 - - 0.821 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
19. CYFIP1 ENSGALG00000016736 6701 1.576 - - - - - - 0.853 0.723 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
20. IGDCC4 ENSGALG00000007410 5457 1.563 - - - 0.780 - - 0.783 - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
21. HTATSF1 ENSGALG00000006410 3526 1.56 - - - 0.787 - - 0.773 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
22. SSU72 ENSGALG00000001489 7589 1.559 - - - - - - 0.828 0.731 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
23. ING4 ENSGALG00000014457 5561 1.541 - - - 0.810 - - - 0.731 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
24. CDR2L ENSGALG00000026295 4142 1.539 - - - 0.727 - - 0.812 - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
25. GLMN ENSGALG00000005959 2049 1.527 - - - 0.805 - - - 0.722 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
26. CYB5R3 ENSGALG00000014122 7664 1.522 - - - 0.760 - - 0.762 - - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
27. EIF4E2 ENSGALG00000007919 8163 1.517 - - - - - - 0.795 0.722 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
28. IMPA1 ENSGALG00000034487 3691 1.515 - - - - - - 0.784 0.731 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
29. CDC42SE2 ENSGALG00000027258 4725 1.509 - - - - - - 0.777 0.732 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
30. LRP12 ENSGALG00000033630 2534 1.507 - - - 0.756 - - 0.751 - - - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
31. TSPAN12 ENSGALG00000009029 2145 1.497 - - - 0.739 - - 0.758 - - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
32. ARPC1A ENSGALG00000004693 11583 1.493 - - - 0.760 - - 0.733 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
33. VPS35 ENSGALG00000004375 8059 1.492 - - - 0.774 - - 0.718 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
34. GTF3A ENSGALG00000017098 9264 1.481 - - - 0.721 - - 0.760 - - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
35. PGAP2 ENSGALG00000027762 2583 1.466 - - - - - - 0.743 0.723 - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
36. SNX9 ENSGALG00000013710 5295 1.42 - - - 0.712 - - 0.708 - - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
37. TIMM10 ENSGALG00000004845 31395 1.417 - - - - - - 0.712 0.705 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
38. ZFX ENSGALG00000016327 5470 1.41 - - - 0.709 - - - 0.701 - - zinc finger protein, X-linked, transcript variant X4
39. VPS13B 2293 0.955 - - - 0.955 - - - - - - vacuolar protein sorting 13 homolog B
40. DBN1 ENSGALG00000033405 216 0.948 - - - 0.948 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
41. VWDE ENSGALG00000042443 160 0.948 - - - 0.948 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
42. VPS29 ENSGALG00000004529 22509 0.947 - - - - - - 0.947 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
43. MLH3 ENSGALG00000010304 231 0.947 - - - 0.947 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
44. ZBTB17 ENSGALG00000035352 280 0.946 - - - 0.946 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
45. CA3 CA3 200 0.944 - - - 0.944 - - - - - -
46. TBK1 ENSGALG00000009840 1650 0.944 - - - 0.944 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
47. SNORA31 SNORA31 183 0.943 - - - 0.943 - - - - - -
48. ADCY9 ENSGALG00000007779 766 0.942 - - - 0.942 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
49. TRIM62 ENSGALG00000028437 5124 0.941 - - - 0.941 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
50. ENSGALG00000027412 ENSGALG00000027412 202 0.941 - - - 0.941 - - - - - -
51. KIF6 ENSGALG00000010057 84 0.939 - - - 0.939 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
52. GFPT2 ENSGALG00000039705 562 0.939 - - - 0.939 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
53. ITGA9 ENSGALG00000029378 415 0.938 - - - 0.938 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
54. WDR96 WDR96 255 0.937 - - - 0.937 - - - - - -
55. LRRCC1 ENSGALG00000039499 480 0.936 - - - 0.936 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
56. KIAA1432 KIAA1432 1792 0.936 - - - 0.936 - - - - - -
57. DEPDC5 ENSGALG00000006766 1592 0.934 - - - 0.934 - - - - - - DEP domain containing 5, transcript variant X6
58. ASPH ENSGALG00000030112 1622 0.933 - - - 0.933 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
59. IFT43 ENSGALG00000020415 1218 0.932 - - - 0.932 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
60. RNPC3 ENSGALG00000005162 269 0.932 - - - 0.932 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
61. TGS1 ENSGALG00000015340 5897 0.93 - - - 0.930 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
62. GUF1 ENSGALG00000014217 211 0.93 - - - 0.930 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
63. ASCC1 ENSGALG00000026019 3583 0.927 - - - 0.927 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
64. HPS5 ENSGALG00000027716 2466 0.927 - - - 0.927 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
65. BAG5 ENSGALG00000031062 4498 0.926 - - - 0.926 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
66. FRRS1 ENSGALG00000005418 332 0.925 - - - 0.925 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
67. PRKD1 ENSGALG00000009900 2094 0.924 - - - 0.924 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
68. MRPS30 ENSGALG00000014874 3416 0.922 - - - 0.922 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
69. TMOD1 ENSGALG00000002125 933 0.922 - - - 0.922 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
70. KIAA1462 1612 0.92 - - - 0.920 - - - - - - KIAA1462, transcript variant X4
71. HINT3 ENSGALG00000044342 5674 0.92 - - - 0.920 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
72. DPY30 ENSGALG00000010621 6818 0.92 - - - 0.920 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
73. ASRGL1 ENSGALG00000015949 403 0.919 - - - 0.919 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
74. PRDM4 ENSGALG00000012619 876 0.919 - - - 0.919 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
75. PASK ENSGALG00000006016 3096 0.918 - - - 0.918 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
76. COPA ENSGALG00000009153 11618 0.917 - - - 0.917 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
77. NCOA3 ENSGALG00000004570 243 0.916 - - - 0.916 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
78. CYP20A1 ENSGALG00000008730 930 0.915 - - - 0.915 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
79. MCCC2L ENSGALG00000011255 889 0.911 - - - 0.911 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
80. ABCD2 ENSGALG00000042554 1607 0.909 - - - 0.909 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
81. GALNT12 ENSGALG00000013197 1330 0.908 - - - 0.908 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
82. CBX3 ENSGALG00000011038 40977 0.907 - - - 0.907 - - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
83. PDE4B ENSGALG00000011094 1871 0.905 - - - 0.905 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
84. GTF3C4 ENSGALG00000031016 1221 0.904 - - - 0.904 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
85. SUMO1 ENSGALG00000008435 19847 0.904 - - - 0.904 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
86. KIN ENSGALG00000030702 1608 0.904 - - - 0.904 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
87. FIGNL1 ENSGALG00000026363 2194 0.903 - - - 0.903 - - - - - - fidgetin like 1, transcript variant X2
88. HMHA1 HMHA1 929 0.902 - - - 0.902 - - - - - -
89. ATP1A1 ENSGALG00000032247 15898 0.901 - - - - - - 0.901 - - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
90. SPCS2 ENSGALG00000019036 9496 0.9 - - - - - - 0.900 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
91. EMC6 ENSGALG00000026492 20687 0.9 - - - - - - - 0.900 - - ER membrane protein complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:28430]
92. RBFOX1 ENSGALG00000034325 2133 0.899 - - - 0.899 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
93. CCNK ENSGALG00000011138 6416 0.898 - - - - - - 0.898 - - - cyclin K [Source:NCBI gene;Acc:423446]
94. C1orf21 ENSGALG00000020922 4035 0.898 - - - 0.898 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
95. RSBN1 ENSGALG00000001860 761 0.898 - - - 0.898 - - - - - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
96. MPHOSPH10 ENSGALG00000003906 7029 0.897 - - - 0.897 - - - - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
97. ITPKB ENSGALG00000009068 324 0.897 - - - 0.897 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
98. ELMOD1 ENSGALG00000017169 2303 0.897 - - - 0.897 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
99. YARS ENSGALG00000003563 11093 0.897 - - - 0.897 - - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
100. PANK1 ENSGALG00000006431 2910 0.896 - - - 0.896 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]

There are 601 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA