Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHCHD1

Gene Name Gene ID Reads Annotation
CHCHD1 ENSGALG00000028809 9955 coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]











Genes with expression patterns similar to CHCHD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHCHD1 ENSGALG00000028809 9955 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
2. ZFR ENSGALG00000003235 8466 1.608 - - - - - - 0.720 0.888 - - zinc finger RNA binding protein, transcript variant X3
3. SNX4 ENSGALG00000012052 11634 1.605 - - - - - - 0.753 0.852 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
4. SLC25A17 ENSGALG00000012013 13948 1.6 - - - - - - 0.711 0.889 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
5. HIF1A ENSGALG00000011870 9768 1.587 - - - - - - 0.864 0.723 - - hypoxia inducible factor 1 subunit alpha [Source:NCBI gene;Acc:374177]
6. LYAR ENSGALG00000015000 10756 1.568 - - - - - - 0.734 0.834 - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
7. C15ORF23 C15ORF23 14264 1.519 - - - - - - 0.769 0.750 - -
8. PPP2R5A ENSGALG00000009828 10309 1.495 - - - - - - 0.737 0.758 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
9. RCN1 RCN1 11758 1.489 - - - - - - 0.749 0.740 - -
10. TRIM33 ENSGALG00000001976 7404 1.46 - - - - - - 0.711 0.749 - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
11. C19orf70 ENSGALG00000026847 19315 0.893 - - - - - - - 0.893 - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
12. ATAD2 ENSGALG00000034348 4440 0.875 - - - - - - 0.875 - - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
13. PSMD7 ENSGALG00000000707 26350 0.874 - - - - - - - 0.874 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
14. TMEM87A ENSGALG00000009018 8027 0.869 - - - - - - 0.869 - - - transmembrane protein 87A [Source:HGNC Symbol;Acc:HGNC:24522]
15. GAS41 GAS41 9941 0.852 - - - - - - - 0.852 - -
16. CYFIP1 ENSGALG00000016736 6701 0.851 - - - - - - 0.851 - - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
17. XPO1 ENSGALG00000029476 9526 0.85 - - - - - - 0.850 - - - exportin 1 [Source:NCBI gene;Acc:421192]
18. NUP37 ENSGALG00000012759 9985 0.849 - - - - - - - 0.849 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
19. COPA ENSGALG00000009153 11618 0.846 - - - - - - 0.846 - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
20. TXN2 ENSGALG00000012532 12518 0.841 - - - - - - - 0.841 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
21. SRP14 ENSGALG00000009592 17828 0.841 - - - - - - - 0.841 - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
22. APLP2 ENSGALG00000001250 22253 0.837 - - - - - - 0.837 - - - amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:419727]
23. SCFD1 ENSGALG00000009916 5756 0.837 - - - - - - 0.837 - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
24. CACYBP ENSGALG00000004554 7320 0.837 - - - - - - 0.837 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
25. VPS26A ENSGALG00000004174 9198 0.837 - - - - - - 0.837 - - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
26. RAE1 ENSGALG00000007653 8930 0.836 - - - - - - 0.836 - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
27. MED4 ENSGALG00000016995 3309 0.835 - - - - - - - 0.835 - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
28. EAPP ENSGALG00000010007 5080 0.833 - - - - - - - 0.833 - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
29. NR2C1 ENSGALG00000011327 5109 0.833 - - - - - - - 0.833 - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
30. OAT ENSGALG00000031158 10249 0.831 - - - - - - 0.831 - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
31. TXNL1 ENSGALG00000033862 13899 0.83 - - - - - - - 0.830 - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
32. APRT ENSGALG00000031000 7535 0.829 - - - - - - 0.829 - - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
33. PRPF6 ENSGALG00000006001 8572 0.828 - - - - - - 0.828 - - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
34. ZCCHC6 ENSGALG00000012607 3655 0.827 - - - - - - 0.827 - - - zinc finger CCHC-type containing 6 [Source:NCBI gene;Acc:100857368]
35. QTRTD1 QTRTD1 10765 0.826 - - - - - - - 0.826 - -
36. DYNC1H1 ENSGALG00000011330 16400 0.824 - - - - - - 0.824 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
37. SRRM1 ENSGALG00000001283 23820 0.819 - - - - - - 0.819 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
38. PTCH1 ENSGALG00000012620 4840 0.818 - - - - - - - 0.818 - - patched 1 [Source:NCBI gene;Acc:395806]
39. CENPH ENSGALG00000014788 10601 0.815 - - - - - - 0.815 - - - centromere protein H [Source:NCBI gene;Acc:395316]
40. NDUFS3 ENSGALG00000008084 12471 0.814 - - - - - - - 0.814 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
41. TMLHE ENSGALG00000007443 3619 0.814 - - - - - - - 0.814 - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
42. ARHGAP19 ENSGALG00000007609 3655 0.813 - - - - - - 0.813 - - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
43. CASP3 ENSGALG00000010638 11572 0.812 - - - - - - 0.812 - - - caspase 3 [Source:NCBI gene;Acc:395476]
44. RRAS2 ENSGALG00000005998 6467 0.812 - - - - - - - 0.812 - - RAS related 2 [Source:NCBI gene;Acc:423062]
45. QDPR ENSGALG00000030070 6953 0.811 - - - - - - - 0.811 - - quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
46. IPO9 ENSGALG00000000397 9263 0.808 - - - - - - 0.808 - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
47. LYPLA1 ENSGALG00000040421 14720 0.808 - - - - - - 0.808 - - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
48. UPF3B ENSGALG00000008618 12350 0.807 - - - - - - 0.807 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
49. NEK7 ENSGALG00000002216 4532 0.807 - - - - - - - 0.807 - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
50. KDELR2 ENSGALG00000040793 29669 0.807 - - - - - - 0.807 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
51. RNF114 ENSGALG00000008021 6078 0.806 - - - - - - - 0.806 - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
52. CPSF6 ENSGALG00000019355 7634 0.806 - - - - - - 0.806 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
53. MCTS1 ENSGALG00000008517 27514 0.802 - - - - - - 0.802 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
54. SLC35B1 ENSGALG00000035057 10683 0.801 - - - - - - - 0.801 - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
55. DBI ENSGALG00000012112 6910 0.801 - - - - - - - 0.801 - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
56. ENSGALG00000007035 ENSGALG00000007035 8473 0.801 - - - - - - - 0.801 - -
57. SRGAP1 ENSGALG00000009825 6753 0.801 - - - - - - 0.801 - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
58. TFDP1 ENSGALG00000016823 17019 0.801 - - - - - - 0.801 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
59. NAA35 ENSGALG00000012598 6409 0.801 - - - - - - 0.801 - - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:NCBI gene;Acc:427461]
60. SRSF6 ENSGALG00000000990 12424 0.799 - - - - - - 0.799 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
61. gga-mir-7476 gga-mir-7476 20209 0.799 - - - - - - - 0.799 - -
62. PNRC2 ENSGALG00000004122 19228 0.797 - - - - - - 0.797 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
63. CHSAP18 CHSAP18 12901 0.796 - - - - - - - 0.796 - -
64. RNF219 ENSGALG00000016911 4458 0.795 - - - - - - 0.795 - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
65. CCNK ENSGALG00000011138 6416 0.794 - - - - - - 0.794 - - - cyclin K [Source:NCBI gene;Acc:423446]
66. GCSH ENSGALG00000032679 29231 0.794 - - - - - - - 0.794 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
67. C1H2ORF49 ENSGALG00000016796 2976 0.793 - - - - - - - 0.793 - - chromosome 1 open reading frame, human C2orf49 [Source:NCBI gene;Acc:418725]
68. MPRIP ENSGALG00000004798 6700 0.792 - - - - - - 0.792 - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
69. KDM5B ENSGALG00000038948 50645 0.792 - - - - - - 0.792 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
70. HSF2 ENSGALG00000038420 5259 0.792 - - - - - - 0.792 - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
71. MTHFD1 ENSGALG00000011797 11001 0.792 - - - - - - 0.792 - - - methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
72. RBBP8 ENSGALG00000014982 3255 0.791 - - - - - - - 0.791 - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
73. GMNN ENSGALG00000013626 15838 0.79 - - - - - - 0.790 - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
74. RPL7L1 ENSGALG00000011974 20292 0.79 - - - - - - 0.790 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
75. PTP4A2 ENSGALG00000003265 24826 0.788 - - - - - - 0.788 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
76. SF3A2 ENSGALG00000021679 12580 0.787 - - - - - - - 0.787 - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
77. MYCBP ENSGALG00000024295 13273 0.787 - - - - - - - 0.787 - - MYC binding protein
78. SLC30A4 ENSGALG00000005703 5696 0.787 - - - - - - 0.787 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
79. BZW2 ENSGALG00000010809 29213 0.787 - - - - - - - 0.787 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
80. SCAMP5 ENSGALG00000014116 8877 0.786 - - - - - - - 0.786 - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
81. HS2ST1 ENSGALG00000028423 4153 0.786 - - - - - - - 0.786 - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
82. SCHIP1 ENSGALG00000039468 5912 0.786 - - - - - - 0.786 - - - schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]
83. CETN1 ENSGALG00000026741 7243 0.784 - - - - - - 0.784 - - - centrin 1 [Source:NCBI gene;Acc:422668]
84. PSMB3 ENSGALG00000001597 22588 0.784 - - - - - - - 0.784 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
85. C7orf50 ENSGALG00000004055 5786 0.784 - - - - - - - 0.784 - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
86. MRPL53 ENSGALG00000037867 6100 0.783 - - - - - - - 0.783 - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
87. CHMP4B ENSGALG00000002095 17422 0.783 - - - - - - - 0.783 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
88. FEN1 ENSGALG00000033781 16551 0.783 - - - - - - 0.783 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
89. CBLL1 ENSGALG00000038981 6725 0.782 - - - - - - - 0.782 - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
90. TMEM115 ENSGALG00000026965 13050 0.782 - - - - - - 0.782 - - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
91. ENSGALG00000005727 ENSGALG00000005727 4334 0.78 - - - - - - - 0.780 - -
92. POP5 ENSGALG00000007124 10365 0.779 - - - - - - - 0.779 - - POP5 homolog, ribonuclease P/MRP subunit [Source:HGNC Symbol;Acc:HGNC:17689]
93. PFDN2 ENSGALG00000026374 22020 0.779 - - - - - - 0.779 - - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
94. CEP70 ENSGALG00000012087 7992 0.778 - - - - - - 0.778 - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
95. UBR5 ENSGALG00000031282 12143 0.778 - - - - - - 0.778 - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
96. PPP1CC ENSGALG00000004571 14748 0.778 - - - - - - 0.778 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
97. GNL3 ENSGALG00000001613 10911 0.777 - - - - - - 0.777 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
98. SEC22B ENSGALG00000039704 16080 0.777 - - - - - - 0.777 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
99. RRP9 ENSGALG00000043359 9747 0.776 - - - - - - 0.776 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
100. COPB2 ENSGALG00000005357 15208 0.776 - - - - - - 0.776 - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]

There are 213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA