Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHAT

Gene Name Gene ID Reads Annotation
CHAT ENSGALG00000002289 26 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]











Genes with expression patterns similar to CHAT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHAT ENSGALG00000002289 26 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
2. CLDN16 ENSGALG00000025821 14 2 - - 1.000 - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
3. TEX33 ENSGALG00000012490 11 2 - - - - - 1.000 - 1.000 - - testis expressed 33, transcript variant X2
4. FAT2 ENSGALG00000004320 4 2 - - - - - 1.000 - 1.000 - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
5. ENSGALG00000028402 ENSGALG00000028402 5 1.987 - - 0.987 - - - - 1.000 - -
6. SNORD100 SNORD100 270 1.97 - - - - 1.000 - - 0.970 - -
7. LRRC32 9 1.957 - - 0.957 - - - - 1.000 - - leucine rich repeat containing 32
8. TNFRSF18 ENSGALG00000001882 12 1.892 - - - - - 0.892 - 1.000 - - TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
9. RAB43 ENSGALG00000005021 5 1.877 - - - - 0.877 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
10. PSEN2 ENSGALG00000009073 7 1.839 - - - - - 1.000 - 0.839 - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
11. QSOX1 ENSGALG00000003933 184 1.813 - - - - - 1.000 - - - 0.813 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
12. ARL15 ENSGALG00000014911 13 1.801 - - - - 1.000 - - - - 0.801 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
13. FBXL4 ENSGALG00000015490 12 1.787 - - - - 1.000 - - - - 0.787 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
14. SNTG2 ENSGALG00000016367 42 1.759 - - - - - - - 0.970 - 0.789 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
15. SNORD61 SNORD61 12 1.748 - - 0.748 - - 1.000 - - - -
16. SULT ENSGALG00000011287 62 1.563 - - 0.759 - - 0.804 - - - - sulfotransferase [Source:NCBI gene;Acc:395933]
17. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
18. EML5 ENSGALG00000010639 25 1 - - - - - - - 1.000 - - echinoderm microtubule associated protein like 5, transcript variant X1
19. ANO3 ENSGALG00000013311 16 1 - - - - 1.000 - - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
20. ATP6V1AL ENSGALG00000000048 21 1 - - 1.000 - - - - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
21. WDR72 ENSGALG00000004545 5 1 - - 1.000 - - - - - - - WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
22. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
23. SLC25A43 ENSGALG00000008682 1 1 - - - - 1.000 - - - - - solute carrier family 25 member 43 [Source:HGNC Symbol;Acc:HGNC:30557]
24. XDH ENSGALG00000008701 10 1 - - - - 1.000 - - - - - xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
25. DINB1 DINB1 113 1 - - - - - - - 1.000 - -
26. TSNAXIP1 ENSGALG00000001533 9 1 - - - - 1.000 - - - - - translin associated factor X interacting protein 1, transcript variant X2
27. ENSGALG00000023027 ENSGALG00000023027 5 1 - - 1.000 - - - - - - -
28. CCDC69 2 1 - - - - - - - 1.000 - - coiled-coil domain containing 69
29. TRPV2 ENSGALG00000004519 7 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
30. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
31. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
32. TRAF2 ENSGALG00000042838 24 1 - - - - 1.000 - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
33. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
34. H2AFX ENSGALG00000045705 7 1 - - - - - - - 1.000 - - H2A histone family member X
35. TRHDE ENSGALG00000010200 4 1 - - - - 1.000 - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
36. PLD5 ENSGALG00000010737 5 1 - - - - 1.000 - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
37. ZAP70 ENSGALG00000001486 2 1 - - 1.000 - - - - - - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
38. F7 ENSGALG00000016833 4 1 - - 1.000 - - - - - - - coagulation factor VII [Source:NCBI gene;Acc:395086]
39. LRRC63 8 1 - - - - - - - 1.000 - - leucine rich repeat containing 63, transcript variant X3
40. BDKRB2 ENSGALG00000011080 12 1 - - 1.000 - - - - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
41. FGG ENSGALG00000009268 418 1 - - 1.000 - - - - - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
42. ASPR ASPR 1 1 - - - - - 1.000 - - - -
43. POMT2 ENSGALG00000041962 1 1 - - - - 1.000 - - - - - protein O-mannosyltransferase 2, transcript variant X7
44. GPR22 ENSGALG00000008032 5 1 - - - - 1.000 - - - - - G protein-coupled receptor 22, transcript variant X1
45. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
46. C2CD3 ENSGALG00000017314 13 1 - - - - 1.000 - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
47. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
48. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
49. PLEKHM2 ENSGALG00000003439 44 1 - - - - - - - 1.000 - - pleckstrin homology and RUN domain containing M2 [Source:HGNC Symbol;Acc:HGNC:29131]
50. DCDC2B ENSGALG00000046649 3 1 - - 1.000 - - - - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
51. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
52. PSCA ENSGALG00000045875 5 1 - - 1.000 - - - - - - - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
53. HOXB1 ENSGALG00000013454 9 1 - - - - 1.000 - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
54. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
55. DYNC1LI2 ENSGALG00000005241 25 1 - - - - - - - 1.000 - - dynein cytoplasmic 1 light intermediate chain 2 [Source:NCBI gene;Acc:415793]
56. TYR ENSGALG00000017237 4 1 - - - - - - - 1.000 - - tyrosinase [Source:NCBI gene;Acc:373971]
57. OXGR1 ENSGALG00000016891 13 1 - - - - - - - 1.000 - - oxoglutarate receptor 1
58. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
59. GRAP2 ENSGALG00000012056 16 1 - - - - - - - 1.000 - - GRB2-related adaptor protein 2, transcript variant X3
60. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
61. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
62. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
63. IFNG ENSGALG00000009903 5 1 - - - - - - - 1.000 - - interferon gamma [Source:NCBI gene;Acc:396054]
64. A1CF ENSGALG00000003765 36 1 - - 1.000 - - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
65. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
66. LRRC9 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 9
67. uc_6 uc_6 14 1 - - - - - - - 1.000 - -
68. PI4KB ENSGALG00000024034 31 1 - - - - - - - 1.000 - - phosphatidylinositol 4-kinase beta [Source:HGNC Symbol;Acc:HGNC:8984]
69. UNC45B ENSGALG00000002186 399 1 - - - - - - - 1.000 - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
70. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
71. CETP ENSGALG00000001234 18 1 - - - - - - - 1.000 - - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
72. CYP19A1 ENSGALG00000013294 0 1 - - - - - - - 1.000 - - cytochrome P450 family 19 subfamily A member 1 [Source:NCBI gene;Acc:414854]
73. ABCA4 ENSGALG00000005752 15 1 - - 1.000 - - - - - - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
74. CRK ENSGALG00000002656 15 1 - - - - 1.000 - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
75. LRRTM4 ENSGALG00000000476 0 1 - - - - - - - 1.000 - - leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:HGNC:19411]
76. VWA3A 6 1 - - - - - - - 1.000 - - von Willebrand factor A domain containing 3A, transcript variant X4
77. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
78. ENSGALG00000023869 ENSGALG00000023869 1 1 - - 1.000 - - - - - - -
79. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
80. FSTL1 ENSGALG00000014970 25 1 - - - - 1.000 - - - - - follistatin like 1 [Source:NCBI gene;Acc:395349]
81. LAMP3 ENSGALG00000008759 2 1 - - 1.000 - - - - - - - lysosomal associated membrane protein 3 [Source:NCBI gene;Acc:424961]
82. WDR63 ENSGALG00000008696 15 1 - - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
83. ENSGALG00000027400 ENSGALG00000027400 2 1 - - - - - - - 1.000 - -
84. ENSGALG00000028156 ENSGALG00000028156 1 1 - - 1.000 - - - - - - -
85. ENSGALG00000016493 ENSGALG00000016493 2 1 - - - - - - - 1.000 - -
86. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
87. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
88. 5S 5S 0 1 - - - - - 1.000 - - - -
89. RECQL5 ENSGALG00000002424 16 1 - - - - - - - 1.000 - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
90. STAG3 STAG3 34 1 - - - - - - - 1.000 - -
91. ACTL10 ACTL10 3 1 - - 1.000 - - - - - - -
92. EPHB6 ENSGALG00000014749 30 1 - - - - 1.000 - - - - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
93. PCDH19 ENSGALG00000006822 13 1 - - - - 1.000 - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
94. ALC ENSGALG00000040392 282 1 - - - - - - - 1.000 - - ALC protein [Source:NCBI gene;Acc:395084]
95. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
96. CRYAA ENSGALG00000016199 12 1 - - - - - - - 1.000 - - crystallin alpha A [Source:NCBI gene;Acc:418546]
97. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
98. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
99. SCN1A ENSGALG00000010943 6 1 - - - - 1.000 - - - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
100. AKAP14 26 1 - - - - 1.000 - - - - - A-kinase anchoring protein 14, transcript variant X1

There are 298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA