Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHAT

Gene Name Gene ID Reads Annotation
CHAT ENSGALG00000002289 26 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]











Genes with expression patterns similar to CHAT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHAT ENSGALG00000002289 26 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
2. CLDN16 ENSGALG00000025821 14 2 - - 1.000 - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
3. FAT2 ENSGALG00000004320 4 2 - - - - - 1.000 - 1.000 - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
4. TEX33 ENSGALG00000012490 11 2 - - - - - 1.000 - 1.000 - - testis expressed 33, transcript variant X2
5. ENSGALG00000028402 ENSGALG00000028402 5 1.987 - - 0.987 - - - - 1.000 - -
6. SNORD100 SNORD100 270 1.97 - - - - 1.000 - - 0.970 - -
7. LRRC32 9 1.957 - - 0.957 - - - - 1.000 - - leucine rich repeat containing 32
8. TNFRSF18 ENSGALG00000001882 12 1.892 - - - - - 0.892 - 1.000 - - TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
9. RAB43 ENSGALG00000005021 5 1.877 - - - - 0.877 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
10. PSEN2 ENSGALG00000009073 7 1.839 - - - - - 1.000 - 0.839 - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
11. QSOX1 ENSGALG00000003933 184 1.813 - - - - - 1.000 - - - 0.813 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
12. ARL15 ENSGALG00000014911 13 1.801 - - - - 1.000 - - - - 0.801 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
13. FBXL4 ENSGALG00000015490 12 1.787 - - - - 1.000 - - - - 0.787 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
14. SNTG2 ENSGALG00000016367 42 1.759 - - - - - - - 0.970 - 0.789 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
15. SNORD61 SNORD61 12 1.748 - - 0.748 - - 1.000 - - - -
16. SULT ENSGALG00000011287 62 1.563 - - 0.759 - - 0.804 - - - - sulfotransferase [Source:NCBI gene;Acc:395933]
17. ANO3 ENSGALG00000013311 16 1 - - - - 1.000 - - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
18. THAP1 ENSGALG00000015385 15 1 - - - - - - - 1.000 - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
19. ENSGALG00000023695 ENSGALG00000023695 2 1 - - 1.000 - - - - - - -
20. ENSGALG00000023027 ENSGALG00000023027 5 1 - - 1.000 - - - - - - -
21. TMCC3 ENSGALG00000011320 1 1 - - 1.000 - - - - - - - transmembrane and coiled-coil domain family 3, transcript variant X1
22. ASPR ASPR 1 1 - - - - - 1.000 - - - -
23. CYP19A1 ENSGALG00000013294 0 1 - - - - - - - 1.000 - - cytochrome P450 family 19 subfamily A member 1 [Source:NCBI gene;Acc:414854]
24. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
25. RXFP1 ENSGALG00000009429 10 1 - - - - 1.000 - - - - - relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
26. HEPACAM2 ENSGALG00000009482 3 1 - - - - 1.000 - - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
27. MBLAC2 ENSGALG00000014649 16 1 - - - - - - - 1.000 - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
28. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
29. MINPP1 ENSGALG00000003695 1 1 - - - - - - - 1.000 - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
30. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
31. PLEKHM2 ENSGALG00000003439 44 1 - - - - - - - 1.000 - - pleckstrin homology and RUN domain containing M2 [Source:HGNC Symbol;Acc:HGNC:29131]
32. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
33. LOC101747660 ENSGALG00000027822 4 1 - - - - - - - 1.000 - - uncharacterized LOC101747660
34. SYTL2L ENSGALG00000008326 5 1 - - - - 1.000 - - - - - synaptotagmin-like protein 2-like, transcript variant X4
35. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
36. WDR72 ENSGALG00000004545 5 1 - - 1.000 - - - - - - - WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
37. CDHR4 2 1 - - - - 1.000 - - - - - cadherin related family member 4
38. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
39. GRHL2 ENSGALG00000037687 3 1 - - - - 1.000 - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
40. ENSGALG00000016493 ENSGALG00000016493 2 1 - - - - - - - 1.000 - -
41. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
42. OXGR1 ENSGALG00000016891 13 1 - - - - - - - 1.000 - - oxoglutarate receptor 1
43. LRRC9 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 9
44. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
45. IFNG ENSGALG00000009903 5 1 - - - - - - - 1.000 - - interferon gamma [Source:NCBI gene;Acc:396054]
46. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
47. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
48. DINB1 DINB1 113 1 - - - - - - - 1.000 - -
49. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
50. CETP ENSGALG00000001234 18 1 - - - - - - - 1.000 - - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
51. APOLD1 ENSGALG00000011784 1 1 - - 1.000 - - - - - - - apolipoprotein L domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25268]
52. ZAP70 ENSGALG00000001486 2 1 - - 1.000 - - - - - - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
53. 5S 5S 0 1 - - - - - 1.000 - - - -
54. ENSGALG00000027704 ENSGALG00000027704 2 1 - - - - - - - 1.000 - -
55. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
56. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
57. PLD5 ENSGALG00000010737 5 1 - - - - 1.000 - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
58. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
59. CDCA4L ENSGALG00000023023 1 1 - - - - 1.000 - - - - - cell division cycle associated 4-like, transcript variant X1
60. VWA3A 6 1 - - - - - - - 1.000 - - von Willebrand factor A domain containing 3A, transcript variant X4
61. SLC25A43 ENSGALG00000008682 1 1 - - - - 1.000 - - - - - solute carrier family 25 member 43 [Source:HGNC Symbol;Acc:HGNC:30557]
62. CAPN13 ENSGALG00000020084 6 1 - - - - 1.000 - - - - - calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]
63. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
64. RECQL5 ENSGALG00000002424 16 1 - - - - - - - 1.000 - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
65. UNC45B ENSGALG00000002186 399 1 - - - - - - - 1.000 - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
66. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
67. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
68. HFM1 ENSGALG00000006091 5 1 - - - - 1.000 - - - - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
69. SNORD73 SNORD73 113 1 - - - - - - - 1.000 - -
70. ENSGALG00000027400 ENSGALG00000027400 2 1 - - - - - - - 1.000 - -
71. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
72. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
73. XDH ENSGALG00000008701 10 1 - - - - 1.000 - - - - - xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
74. ST8SIA5 ENSGALG00000035927 4 1 - - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
75. TRHDE ENSGALG00000010200 4 1 - - - - 1.000 - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
76. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
77. DYNC1LI2 ENSGALG00000005241 25 1 - - - - - - - 1.000 - - dynein cytoplasmic 1 light intermediate chain 2 [Source:NCBI gene;Acc:415793]
78. AKAP14 26 1 - - - - 1.000 - - - - - A-kinase anchoring protein 14, transcript variant X1
79. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
80. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
81. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
82. TRAF2 ENSGALG00000042838 24 1 - - - - 1.000 - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
83. ENSGALG00000023704 ENSGALG00000023704 2 1 - - - - - - - 1.000 - -
84. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
85. LRRTM4 ENSGALG00000000476 0 1 - - - - - - - 1.000 - - leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:HGNC:19411]
86. CLEC19A ENSGALG00000030546 8 1 - - - - - - - 1.000 - - C-type lectin domain containing 19A [Source:HGNC Symbol;Acc:HGNC:34522]
87. CCDC178 6 1 - - - - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
88. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
89. CASS4 ENSGALG00000007744 10 1 - - - - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
90. A1CF ENSGALG00000003765 36 1 - - 1.000 - - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
91. ABCA4 ENSGALG00000005752 15 1 - - 1.000 - - - - - - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
92. FGG ENSGALG00000009268 418 1 - - 1.000 - - - - - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
93. PI4KB ENSGALG00000024034 31 1 - - - - - - - 1.000 - - phosphatidylinositol 4-kinase beta [Source:HGNC Symbol;Acc:HGNC:8984]
94. FSTL1 ENSGALG00000014970 25 1 - - - - 1.000 - - - - - follistatin like 1 [Source:NCBI gene;Acc:395349]
95. BTBD10 ENSGALG00000005369 56 1 - - - - 1.000 - - - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
96. F7 ENSGALG00000016833 4 1 - - 1.000 - - - - - - - coagulation factor VII [Source:NCBI gene;Acc:395086]
97. DCDC2B ENSGALG00000046649 3 1 - - 1.000 - - - - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
98. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
99. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
100. CAPS2 ENSGALG00000010208 0 1 - - - - - - - 1.000 - - calcyphosine 2 [Source:HGNC Symbol;Acc:HGNC:16471]

There are 298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA